Array 1 42-863 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_SWAW01000070.1 Halothiobacillus sp. SB14A NODE_70_length_897_cov_100.387695, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
        42	    29	  82.8	    32	.A....T..AT..A...............	GTCTCGAGGGAGGCAAACGGGATGCCGAAGTG	
       103	    29	  93.1	    32	.A..........T................	GTGCTCGACGCCAGCGCCACCAGCCCCAGCCG	
       164	    29	  96.6	    32	............A................	GGATTCAAGGCATGGTGGCAGCGCCTACAGCG	
       225	    29	  93.1	    32	...........AA................	AAGGCGAACCCGCACAATGGGTACAACAAACT	
       286	    29	  89.7	    32	.A.T...T.....................	TTCACCGATCTGACGATCACCCGCCCGGATCC	
       347	    29	 100.0	    31	.............................	GCCATCGACAACCGCCGGCGCCTGGAAGCGG 	
       407	    29	  89.7	    32	AC..........G................	GTGCCGGCGCGGATGATGGTCGCGGTGATCCG	T [409]
       469	    29	  96.6	    32	.C...........................	GAGACGCAGCGCAGCGCCGCGGCGAATGCCCG	
       530	    29	  96.6	    32	.................C...........	TGCGCGATCGACTCGCCCGCGAGACCGAGGAC	
       591	    29	  96.6	    32	....................A........	CTCACAGCCACGACCGACCCGACGGTAAACGA	
       652	    29	 100.0	    32	.............................	ATCAAGGCGACGAAGACGCGCCGGTCCACGCG	
       713	    29	 100.0	    32	.............................	ATGGCCGGGTCATACGGGTGCCAGGTGGTGTA	
       774	    29	 100.0	    32	.............................	CCGTGACGTAACCCGTGACACCCCGTGCCATA	
       835	    29	 100.0	     0	.............................	|                               	
==========	======	======	======	=============================	================================	==================
        14	    29	  95.3	    32	GTCCTCCCCGCGCGAGCGGGGGTGTTTCC	                                	       

# Left flank :   GGTGTTTCCAAGATCGACGGCGTGGTGGCGTTGATTATGGCG
# Right flank :  CCGTATGCCGAGGCGGACCTGTTCGACATCCAGT

# Questionable array : NO	 Score: 5.58
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCCTCCCCGCGCGAGCGGGGGTGTTTCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [1,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTCCTCCCCGCCCGCGCGGGGGTGTTCCG with 93% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.80,-12.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [13-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [30.0-21.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.87,0.78   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//