Array 1 64414-65296 **** Predicted by CRISPRDetect 2.4 *** >NZ_VKNN01000011.1 Klebsiella michiganensis strain KO14657 Klox14657_C11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 64414 29 96.6 32 ..............T.............. CGCGTTGAAGATGGTGTTCTGAGGCTTCAGGC 64475 29 96.6 32 ..............T.............. AACCGCCAAACAACCAGTTGAAGAATCCGGGC 64536 29 100.0 32 ............................. CCTGACGGTAAGCGCCTGATTAATCGCCTCGA 64597 29 100.0 32 ............................. CCCAGCTTGTGAAAGTCCGCAAATCAGGGAAA 64658 29 100.0 32 ............................. GTGATCTCTCCGCTGGCGACTGCCATTTTCAG 64719 29 100.0 32 ............................. CGTAAACTCGACCAATTCGTCGGTTTCAAGGC 64780 29 100.0 32 ............................. GATTTGGGAGAAAGGCAATGCTACCGGGTTCC 64841 29 100.0 32 ............................. CGTACGGGGTGAGCGTTATCGAGGGCCATCTC 64902 29 100.0 32 ............................. CGCTAACCATCCCGTTAAATCGCAACTCCGAA 64963 29 100.0 32 ............................. AAGTTCAGCGAGACCGATCGCACCGGAACCGG 65024 29 100.0 32 ............................. GATTCCGTAATCTGTTTAACTGCCCCCGACAC 65085 29 100.0 32 ............................. TTCGAAGGCTTCTTTCAGAAGTGACTCGATAG 65146 29 100.0 32 ............................. TCCGTTGTGCCTGGTTCAGCCTGGTCAGAGTC 65207 29 100.0 32 ............................. GCGAAATGGTTTTCTATGCGTAGTCAGTTATC 65268 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 15 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTCGCAGCTGGTGAGATTGAGCCACCTCAGCCAGCGGCGGATATGCTGCCACCGGCAATACCAGAACCGCAGCGACTTGGCGACGGCGGGCATCGGGGAGGTGGGTGATGAGTATGGTGATGGTTGTTACGGAAAACGTGCCGCCGCGTCTGCGAGGACGGCTTGCCATATGGTTACTGGAGATTCGAGCCGGGGTGTATGTTGGCGATATCTCAAAACGTGTGCGGGAGATGATCTGGCAACAGGTTACACAATTAGGAGGCGTTGGAAACGTTGTGATGGCTTGGGCAACGAATACAGAATCAGGTTTTGAGTTCCAAACATGGGGTGAAAATCGACGTATTCCGGTAGATTTGGATGGTCTGAGATTGGTTTCTTTTCTTCCCATTAAAAATCAGTAGGTTATAAGTTCTTTAATAAAAAGGAATTGTTGAACATAAGTTGGTAAATTGTTTCTGTCTGAAAATTGTAATAAAAAACAAATATATATATTTAGA # Right flank : TATGGCGCAGCTTGAGCATTATCGAGACACTGGTGTTCCCCGCGCCAGCGG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [81.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 10-708 **** Predicted by CRISPRDetect 2.4 *** >NZ_VKNN01000149.1 Klebsiella michiganensis strain KO14657 Klox14657_C149, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 10 29 100.0 32 ............................. TCCGTTGTGCCTGGTTCAGCCTGGTCAGAGTC 71 29 100.0 32 ............................. GCGAAATGGTTTTCTATGCGTAGTCAGTTATC 132 29 100.0 32 ............................. TATGGCGCAGCTTGAGCATTATCGAGACACTG 193 29 100.0 32 ............................. CTATTGTGCTGGCCGACGAGCTTAGTACTGTG 254 29 100.0 32 ............................. GTCGCCGTAAACGGTAATATTCCTGCTGGAGT 315 29 100.0 32 ............................. GATGCAAAACGGTGAAATGTCCACTCAAGTGG 376 29 100.0 32 ............................. TCCACGGCCGCCGCCTGGCTAAACAGATAAAA 437 29 100.0 32 ............................. GGGTTTGCATCAGCGGCGGAATTACTGGCCTT 498 29 96.6 31 ............................A GCTTGCAATAAGTAGCGGCAGCGCTAACCGG 558 29 100.0 32 ............................. TCCCAACGCCTGGTTCAGTTCGTCAGTGGATA 619 29 100.0 32 ............................. GACGGCAGACTTATGGAAACCAGCTGAATATT 680 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 12 29 99.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : ACTCGATAGG # Right flank : TTTCGCCAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [8.3-6.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 182410-181893 **** Predicted by CRISPRDetect 2.4 *** >NZ_VKNN01000002.1 Klebsiella michiganensis strain KO14657 Klox14657_C2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 182409 29 100.0 32 ............................. AACGTTCTGCTTGTTGGATTACTCGTGCTGAC 182348 29 100.0 32 ............................. TATGCATTACGCGGAACTGGCGTACAGGTGGG 182287 29 100.0 32 ............................. AGATACGCTTGCCCACTGGAGTTCCTTTTCAG 182226 29 100.0 32 ............................. ACGCCGGAGCACACAGAGAATCGACTGTGGAT 182165 29 100.0 32 ............................. GAGCCGGCATCAATGGAAAACGTTCAGGATTA 182104 29 100.0 32 ............................. CAGGAAATCGTGTGCAGCCGTTCGTTAGGCGG 182043 29 93.1 32 ........T...T................ TTTATTGGCAAGGCGCCTCAGGATTGGGAGGA 181982 29 89.7 32 ...........AT..T............. GGCTACCAGTACCTGCATACCAGGGATTTCGT 181921 29 96.6 0 .........A................... | ========== ====== ====== ====== ============================= ================================ ================== 9 29 97.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GCCAGCGGGGATAAACCGTCCTTCCGCCAGCCCACGGGTAACAATGCCT # Right flank : CCCGGAGGAAACGTGGCAACAGTTCAATACTCGTGTTCCCCGCGCCGCCATCCTTATTATCCTGTACTTTATTTTTTCCATCATTCTTTAGTGTGGCAAAGTCCGCTTTCTGGCGATACTTGCCAAATTTTGGGCTCATGGGAACAGTGCGTCGTTTTTAACATAGCGCTTATACAGATGTTTTACCGATGCTGGGTTCCGAGCCCAAATCCAACCCGTCCTGCCATACGCGCTGCCAGATATAAACCTGTCTGTCGGCGATGGATCGCGTGCTGGTAGCCAGTAGCAGTAACAACGGTATTAAAAAATGAAAACGCATCATGGCGACAGTCCTTGTTGCCTGATTTTATCGTTAGTCTATTTTGAGGCGGGTCTCTTCTCCGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACTTTCATCACATCGCGTCCGCGATGCTCAATACGCCCCGGCAGCGCTTTATCAATATACTGCAGGTTATCCAGCTGTACGTCAT # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //