Array 1 17857-17225 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADBQA010000027.1 Enterobacter cloacae complex sp. P28RS contig_0027, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 17856 28 100.0 34 ............................ CTGCATGACTGGATATCCATTCCGGTTACTGCAC 17794 28 100.0 32 ............................ CCACATATGCATTCATCTCACCGGTGCGCATC 17734 28 100.0 32 ............................ TCAGGCTGGCAATACATCTTCGGCATTGTCGG 17674 28 100.0 32 ............................ TTGCAAATCGAAAATGCGGGACTGTTCAATAT 17614 28 100.0 32 ............................ CGTCGGAACGGCGCATCGCTGCTGCGGCGGCT 17554 28 100.0 32 ............................ TAGTCACCCAGCGTTTGATGCATTACGGTGCG 17494 28 100.0 32 ............................ AAAAAAGCGATTACGCCGTTCTTCTATCAGGA 17434 28 100.0 32 ............................ GATTATCGTTTCAAGCTGCGTGACGCTTATTT 17374 28 96.4 32 ........T................... CACTCAATGCCCATTTGCACAAATGAGTTAAT T [17368] 17313 28 100.0 32 ............................ TTCCTGCGATTGCTCTATGGCGCGACGAGTGA 17253 28 85.7 0 ...........A........T...T..C | T [17229] ========== ====== ====== ====== ============================ ================================== ================== 11 28 98.4 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGCGCCACACGTTCGCTCTCGTCGGGCGTCAGCGTCCGGCCCGTACTTTTGCGGCGGGCAACGTTACGCTCGTTAATTCCCGTGACGCGTAAAATCTCCGCTTTCGACATGTCCGTCCACTCGTGAATATTGTCGAGGACGCTGACGGGTAATCCTTGATTGAGATATTCAATCAGCCGCATGCCTCTGCTTGCAGGTAAACCGGCGTAGCGCCACAGCGTGTTATCAGCCGGCCTTTGCGCAGGAACCCATGTTCTCATGATACCTCCTGAGTGATGTCATTTGTCATGAGTAAGTATAGCCATTTGTCAGGGGGTATGGAACGGGTGTTTTTTGTTCAGGGTGGGGTAAAAGAAGGATGGGAGTTGACCCTAATTTTTGCCCAGAATGTAATATATTGATTTTTCGGTTAAATATCCTGGAGCGCAAAAAAAGGGTTTGAGCAGGGATTTTAGCTTTTTTTGTATGAAAATCATGATGGTGGAGAGATATGATTTAA # Right flank : ATCCAATGCAGCAGTACTTCCCACCGCATCCGTGCACCACCGCACAACCAACACAAAATCCGAAACCCAACCACTCGTTCAAATAATCGACTGTACTAACAAAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGCTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCCTCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTCTCAGCGTATTGC # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 28204-27334 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADBQA010000027.1 Enterobacter cloacae complex sp. P28RS contig_0027, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 28203 28 100.0 32 ............................ TGATGCAAGATAACACCGCCACTATGACGATG 28143 28 100.0 32 ............................ TCCATTATACGCATTGGGCCTAGTACGTCAAA 28083 28 96.4 32 T........................... CTATACCGCGGGCGGTGATTATTTCCCTTTTC 28023 28 100.0 32 ............................ GCACTGTTTAATGATCAACGGCCTGTAGCGTT 27963 28 100.0 33 ............................ CATTGATCGCACAAAGAAACTTCCAGATGGAGC 27902 28 100.0 32 ............................ TGCGGTAATTGTCGGTACCGGTTCAGTGACTT 27842 28 100.0 32 ............................ TCGTCAGCATCATCAGGCGCTTCTGAGGGCTT 27782 28 100.0 33 ............................ TTCGCCAAAGCGCTGGCCGTCCATAACGATGAT 27721 28 100.0 32 ............................ TTGCGGGGTGGCGGGATTCCGAGCACCCGCAT 27661 28 100.0 32 ............................ CATGCCGCGGAGTAACTAACGTGATATCCCTT 27601 28 100.0 32 ............................ CATAGCCTTGCTGATGATTGACTCAGCCCATT 27541 28 100.0 32 ............................ GATAACGATCCCCCAGACGACTGAAGAGCTCA 27481 28 100.0 32 ............................ TCTATTTTCCCAGTCAAGGTAAACAGATAACC 27421 28 100.0 32 ............................ GCAACCGCATTGGCCCTGCTTATCACCATGTT 27361 28 71.4 0 ......CA....A........A..CTCC | ========== ====== ====== ====== ============================ ================================= ================== 15 28 97.9 32 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : TCCCGCAAACGCAGCCCGTTTGCCGTTGTCTTGGTGCTTATCTGGACGTAGTCAAAACTGAACTCGCAGAATCAATGAGTGATTTCCGGGTGGTTGAATTTGACGACGAGGCGGAACGGCCGAAGGGCAATGAGTGGCTGCTGGAAGATACTGAAATTAAGTGCGATTACTGCCGGGCATTAAACCACGTGCTGCTGGTGTCGCATTTTGACCGCGAGATGCTGCCCCATCTGACAGGATTGCTGCATGACATTACACATTCGATGGCGGCAGATGTGGTTGCACCTGAATGTGGAAAGCCTGTAATTCATATCATTAATTAGGTTTAGTGTCGTGCGTCGGGGGAGGGGCTCCGGCGCGGTATGGCGAAACCCTTTTTTCGAGCGGTTCTTTAAGTTATTGATTTTTATTGTGCGAATAAAGGCCGCAGAAAAAAGGGTTTGAGGTAGATATGTTGATTATTTTCTTTTCGAACAATAAGATGGCGAAGATTTCTTCCA # Right flank : CCAAACATTCACTCCAGCTATTTTAAAACCCATAATCATCACCACAATCCTCTTTGTATTTTAAATAAACTCAATACTCATTCACCCCACAACCATATTTCCTCATATATATTATTCACAAAAATAATGCATTAAATACGTCAGAGGTTTTTTATCTCGATATTCCGACAATTATTATTCATTTGATACGCGTCACATTTGTCTTCATCTAATCTCCGCTAACATACCTCGCATTCAACATATTGAAATAAAAAGCACTTGCTATGCCAGCGAACAGCATTACCCCATCCGACTTAAAAACCATTCTTCATTCAAAACGTGCCAATATCTATTACCTGGAAAAATGCCGTATTCAGGTAAATGGTGGACGCGTTGAATATGTCACTCAGGAAGGTAAAGAGTCTTTTTACTGGAATATTCCCATCGCTAATACGACGGCAGTAATGTTGGGAATGGGAACATCCGTGACGCAAATGGCGATGCGGGAGTTCGCGCGAGCG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 407803-408130 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADBQA010000003.1 Enterobacter cloacae complex sp. P28RS contig_0003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 407803 28 100.0 32 ............................ TTACAGAAGCCACCAAAGGATAAGGGAGATGG 407863 28 100.0 32 ............................ ACCCGCTACCAAAGCACTCAGCCAAAGACAGA 407923 28 100.0 32 ............................ AGCGTGTTCTTGAATCCTGCCAGACCATTAAC 407983 28 100.0 32 ............................ TCTAACTGCCAGACTTCCTGGCTTTCTCCCTC 408043 28 100.0 32 ............................ TACGGCGACACCGACACGCGCCAGCGTGTTTT 408103 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 6 28 100.0 32 GTTCACTGCCGGGCAGGCAGCTTAGAAA # Left flank : CAGGAACCTGCACAGACGGCGAGTTCACCCGTAAGCTGCGCTTCGGCACCGGCGGCAAAGGCGGCGACTTCTTCATGGCGGGTGGGCATCCACTCAATAGTTTTCATCTTGTTAAGGCTATCGCTGAGTCCGTTCAGAGAATCGCCAGTGACGCCCCAGATACGCTTTACGCCAGCCTGCTCAAGGGTTTTCGCTATGTATGCAGCCACAGTTTGTTTCATGGTTGTCCGTCTCCTTTTTGTGATATCGCTTACAAGCTTAGAAGAAAGTCGCTGTATTGCCTGCTCAGTATTCCTTAAGTACAGGTGGTTTTTCTGCGCGACGCGCCGCCAGCGGGCTGAGGTTGGGGCGGGAGGAAGCGGGTTTGCAGACCCTTTTTTCCTGATGGTGCATAAGTTGTTGATTTTATATGGTTAGGCTGAAGGGGAATAAAAAAGGGGTTGGAGGGAGTTTTTGAGGTATTGGTTTATCAGACAAAGGGATAGATGTAGATTGCTTCA # Right flank : ATCTTGCCTGATTTGCTCATGCCTTTAGTCACGGTTCACTGCCGTACAGGCCGTAGGCACAATGTAGGCCGGGTAAACGTAGTGCCACCCGGCAAAAAGCCCGGTGGCGCTGACGCTTGCCGGGCTTACAGAGGTTCCAAAGGCAAATGCGCTGGCCTGCATGGGCAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGAGGTTCCAAAGGCAAATGCGCTGGCCTGCATGGGCAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGGGTTCCAAAGGCAAATGCGCTGGCCTGCATGGGCAAAAAGCCCGGTGGCGTTGATGCTTACCGGGCCTACAGGTGAACCGCGAAAGATTATGCGAGCACAAGATCGCCTTGCGGATGGCACGAACATGCCAGCACATAGCCCTCCGCGATTTCCGCGTCGGTCAGCGTCATGGTGCTGGTGACCGTGTACTCACCGGAAACCACTTTGGTCTTACAGCAACCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGGGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGGGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [61.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //