Array 1 14367-15946 **** Predicted by CRISPRDetect 2.4 *** >NZ_NFLL01000026.1 Faecalibacterium sp. An122 An122_contig_26, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 14367 33 100.0 34 ................................. TCCGGACAATGCCCGCGCATGGCGGCCTCCAGCG 14434 33 100.0 33 ................................. ATAGACAAGAGGAATGCCTTGCAGCTCAACCCG 14500 33 100.0 35 ................................. ATCGGTTTCCACCGGCAGCATGGTGAGCTTTACGC 14568 33 100.0 34 ................................. CTGGCCGGAACGGTAACCGGTATCCACTACGCCG 14635 33 100.0 34 ................................. CAACCATCAGTGGCTCAACAACGAAAGCAGCGGC 14702 33 100.0 34 ................................. TGTAAGAACTGCATGGTGTTGTTACCATAGTCAT 14769 33 100.0 35 ................................. TGGAAAGCCCCTGCTGGTAACTGTGGTCCACACGG 14837 33 100.0 33 ................................. AGACCAGTGCAACGGACTCTACCAGCCCGCAGG 14903 33 100.0 35 ................................. CCAGAAGGCTCCCGATACTGCCCACGCTGCCCACC 14971 33 100.0 33 ................................. GCAACGTACCAGCCGATCAGCTGTCTGAAACGG 15037 33 100.0 34 ................................. TAGCTTCCACTGCCGCCATGGGCGCTCCCGTCCG 15104 33 100.0 34 ................................. TGGGCGGCTCCGGGTGGAGGATAACCCAGCCCGC 15171 33 100.0 33 ................................. AACCAGGCGTACACGGGTCAAAGCCCGGTCAGC 15237 33 100.0 34 ................................. GAGGCTGTCCAGCCGGAGGGCTTGGGCGGCCTCC 15304 33 100.0 34 ................................. AGCAGGAATTTGTGCAAATGAGTCTGAAACCGGG 15371 33 100.0 35 ................................. AACGGAGCAACCGGAGCAGGGAGCGGGAGCAGCGC 15439 33 100.0 36 ................................. CTGGTTCAGGACTGCCATTTCTCCCAGGTTTGCCAA 15508 33 100.0 35 ................................. ATCGGCCAGGAACTGTTGGAAGTCCTGGAAGTAGT 15576 33 100.0 33 ................................. AAGGACGTGACCTGTGATGCTGCGATTGGCGAT 15642 33 100.0 35 ................................. CAAAAGTATCTCGGACTTTGCAAGAACCACAGAAC 15710 33 100.0 38 ................................. AGCTCTCCGCCCCAGGCGACCATGCGCCGCTTATGCAG 15781 33 100.0 33 ................................. ACAGCGACCCGGCTATAACGGCGTTGTACGCCC 15847 33 97.0 34 ............A.................... AATGAGACCCCGGTCTGCGGGTCCAACTGCATCG 15914 33 93.9 0 ............A...................C | ========== ====== ====== ====== ================================= ====================================== ================== 24 33 99.6 34 GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT # Left flank : CTTGTCACCTATGATGTGAACACCGAGACGGCCGCCGGCCGGCGCCGTCTGCGCAACGTGGCCAAAGCTTGTGTCAATTATGGCCAGCGGGTTCAAAACTCCGTTTTTGAATGTATGCTGGATGCGGCGCAATACGCTCTGTTCAAAGCCGAACTGGCTGCACTGATTGATCCGGAAACGGACAGTCTCCGTTTTTACTGTCTTGGCAATCACTATGCATCCAAGGTGGAGCAGATCGGACTTACGCCCCAATGGCCCCAGGACGGAATCCTTTTAGTGTAAAGGACGGGATTGCTTTCAGCCGCCTCTGTGCGAGCCGGAAGTCCGCAGAACTTTCACGCTTTCCTCGCACCGGATTCTGACTGTTCCTGGATGGTAAAAGTATAAATTGTCTCCTTCATTCATTGCAGGCTGCATAAAATACAGATGTCTTTTTTGTCAGCCTTATCTTTGTGAACAAATGTCAGCGGTTATATTCTCATTTGACCGTCACATTTGCT # Right flank : CACAAAGGCCTGCATCTGCGCCAGGCCATCTGCCGCCCGTGTCTAAAACATAACGCCAATGGGGATGGACGTCCAGGGCGGCAATGCCGTTCATTTCATCCTTGACATCCAGACACAGCGGTATTACTCGGGCATCCATTCGGCAAAGTAGATCGCCATCTGTGCGTGGATCGTACTCCAGTCCTGCCGCCGTCCGGCCCTCTTTTTGGTAATGTCCATCATGGCCAGATGCAGCATTTTCAGCAGGCTGTCATCGGTGGGGAATACGGACTTGGACTTGGTTACCTTGCACAGCTGGCGATTAAATCCCTCAATGTTATTCATGGTAGATCAGCCGCCGGACCTCCTGGGAATACTTGAAGTAGGTACTCAGATTTGCCCAGTTGTCTCTTCAGGACCGGGAGATTTTCGGGTATTTCTTGTCTCAGCGCTCCCCAAAGACGTCGCGACCTGCTCATCCACAACGGCCTGGTGGATGATACAGTTCTGGATCTCGGTCT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCTCCACACGGAGGGCGTGGATAGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.60,-8.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 21123-21531 **** Predicted by CRISPRDetect 2.4 *** >NZ_NFLL01000024.1 Faecalibacterium sp. An122 An122_contig_24, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 21123 36 88.9 29 .GG..G.T............................ ATGGTGTACACCTACACATATTACAGCCA 21188 36 100.0 30 .................................... TTGAGCGTGATAATCACTTCCCATCACCTC 21254 36 100.0 29 .................................... ATCTTTTGTCGCAACGGTGGCCTGTTTGG 21319 36 100.0 30 .................................... GACGGCAGTTCGGACTTGTACTCCATCATT 21385 36 100.0 30 .................................... TCCTTGCTCCACGTCGAAAGCATTTCGTTT 21451 36 88.9 7 .............................A..GC.T TGATACC T [21478] Deletion [21494] 21495 36 80.6 0 .....G.T...................TT.T..G.T | A [21520] ========== ====== ====== ====== ==================================== ============================== ================== 7 36 94.1 26 GTATCAGCTTATCAATATCCATCAGAGAACCAAAAC # Left flank : TTCAGAATGCCGTTGCGGTTTGCCAGGAGCACAAAACCGTCCATGACAAGTACCTGAAGATCGGCTGGAAGAAGCGGCAGGCTGCCTATGCCGAGAGTCACCAGGAGGAACTGAAAGCCTATAACAAAGCCTATCGCTACTTGAAGGCGCAGCACGTTGACCTGAACGTGAATTTGGATGCCCTGGAAGCGGAGTACAGCAAGCTGCAAGCAGATCACGCAGTCTTTGCCCGGCAGCTGGAACAGGTGCAGGCGGAGCTGAAACCGCTGAACGAGGTCCGCTACTGGGTCGGTCAGGTTGTTGGGGTGAAAAAAGAAGCTGAGCTGCGGTCAAAACAATCGGTGATCGGTAAAATTTATGAGAGCAGGGAAGAAACAAAAGGGCGCACAAAAGAAAAACAGAACGATCCGAAACAGAAGGAGAGAACAAAATAAAAAATCCCGTTTATACTGCCAACCATTCTGGCGCGTAAACGGGATTTCTTTCTTTAAAAATAGAGT # Right flank : TAAGGCTTTACGCCGCAGGGTATGGTGGTATCCCTAATAATCCACCGTTTGGAAAATACGACAGCACTGGATTCCAGTGCTGTTTTTGTTTTATGCTGAGAATTTATTCCATTATAACGAATTGAAAAGATGTGTTCAAGGAAATGTTTTTCTCGTTAATAGTACCAGTTTTTTACTCTAAGCAAGTCAAAAGAAAGGCACCTGATTTGAAAACAAATCAGGTGCCTTTTTACTTGATTATATAAAATAGAAAAGGGGAAAATCATTTCTGAGCTAGCAAGAATTCTTGATAAAACGTATACAGGGAAAATATGGTGCTAATCCATTAAGCGAATGCCTCAATACAAAATAAAATTATAAAAGGAGCGATCAAATGGAAAATTTAAACCGATCCAACAACCAGAATGTCCCATTCATTAAACGTACCATCAACGGCCAGGAATTTACGGTGCTCATTCATTTTCAGGACGGGTGCCGTGAAAGCGCACAGGAAAAAGTCA # Questionable array : NO Score: 2.54 # Score Detail : 1:0, 2:0, 3:0, 4:0.70, 5:0, 6:0.25, 7:-0.41, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATCAGCTTATCAATATCCATCAGAGAACCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //