Array 1 189056-185729 **** Predicted by CRISPRDetect 2.4 *** >NZ_UAVW01000021.1 Enterocloster clostridioformis strain NCTC11224, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 189055 33 100.0 34 ................................. CAGATGTCCCATCCACACCCATATCTGCATCCGA 188988 33 100.0 34 ................................. AATTAGGAGGTAAATGTACATGAGTGATATAAAT 188921 33 100.0 34 ................................. CCGTATATGCTCACTCACTGTCATTTTTTCCCTC 188854 33 100.0 33 ................................. GCGTATACGGTAAATGCAGCCCGTATAATCCAC 188788 33 100.0 34 ................................. CGTGTCTATCACAGGAATTTTCTTTTGCTGGGAA 188721 33 100.0 35 ................................. AAGTCCTTTTGGACGATTTATAATTGTAATATGCA 188653 33 100.0 33 ................................. TCAAATCCTATAACTCAAGTTATTCGGCAAGTC 188587 33 100.0 34 ................................. CCGTTTTCTCACCTGCTGTAGAAATCAAGAGAAT 188520 33 100.0 35 ................................. TCCTCCGCGTTCATTGATGTGCGTCCATCCTCCCT 188452 33 100.0 34 ................................. CTCTGCGACTGAGCAATCAGGGTCACAAGGCATC 188385 33 100.0 35 ................................. CCTTGACTGTGGAATAATTGCCTCCAACCTCTTTG 188317 33 100.0 36 ................................. GGCGCAATGGCCAAGGCTTTTGGATTTGGTGAACAG 188248 33 100.0 35 ................................. CCTGACCTACAACCGGATTGTAGGCCGGGGATTTT 188180 33 100.0 34 ................................. CTGCCCTTACATTATGGCAAGGGCATAAAAGAAT 188113 33 100.0 35 ................................. TGGAACATCGGGTTGTATACGCCGTAGGTATCATC 188045 33 100.0 34 ................................. CTTGTCCCAGCACCTCCAGGAACGCCAGGAAGAT 187978 33 100.0 34 ................................. AACGTGAACCGGGGGTATCTGATGATAGTGGACG 187911 33 100.0 35 ................................. TACCGCCAGCACGGTTCCGGCCGGGCTGCTTCCTG 187843 33 100.0 34 ................................. AGCTGGTCCGCCGCCTCCTGGGCCTTTCGCACCA 187776 33 100.0 34 ................................. GCCGGCATCGTGGCAGCGGAGGCGGTAAAACGCG 187709 33 100.0 34 ................................. CGGAAACAGGTTTGCAAGTGCCCGGGTGAATCCC 187642 33 100.0 34 ................................. TTTAAACAGATGATGGAGCCTGTCCTGGAACTGG 187575 33 100.0 33 ................................. ATCTGGGACCGCATGACACTCAGACAGATTATG 187509 33 100.0 35 ................................. CAGATTGCAGGATTGGTAGTCAGAAACTGTGGCTC 187441 33 100.0 34 ................................. TCCCTACGAACCCGGTATAGGTTGTCCTCATACT 187374 33 100.0 35 ................................. GTTTATAATACAATTAAAAGGCGGCAGGACTTTTC 187306 33 100.0 34 ................................. CATTGAAGCAATTAAAGACCACGGCTATGAAAAT 187239 33 100.0 33 ................................. CGACCGGCAGATAATCAACCGCATCCGTGAGTG 187173 33 100.0 34 ................................. ATTCGGGGGATGATGCGGTATTTGTTGGAGTAAT 187106 33 100.0 34 ................................. AAATTTGTTCCAACCGACCTTGACATATTCGAGC 187039 33 100.0 35 ................................. ATGGAAATTGGGGACGGATTGTTTTCTCAGGTCCT 186971 33 100.0 34 ................................. CTCGTCTGTGATTGTCCGTACATCCAGCATATCA 186904 33 100.0 33 ................................. ACAGAAGATATTAGATAGATTTATCATTAAGTA 186838 33 100.0 34 ................................. AGTTAGATAAAGAGGGAAAAAATGACAGTGAGTG 186771 33 100.0 34 ................................. ACTGGGAAAGGCCGTGAAGGCAGGGTTCCAGGGG 186704 33 100.0 36 ................................. TCCAATTCTCCCGGAAATGCTAATTTCCTGTTTCTG 186635 33 100.0 34 ................................. TGCTTGGATAGCAAGTAGGATTTCCGGTCAAGCA 186568 33 100.0 34 ................................. TATATGATGTAACTATGTTTTCTGCTTTTGCGTC 186501 33 100.0 34 ................................. CCTATGCCAGCTGTGCAGCCGGTCATTGTATAAG 186434 33 100.0 33 ................................. ATTGATAACTTATTACACATAAATCAGATAAAT 186368 33 100.0 34 ................................. CCCATGCCAATTGTGTCTACATGATGTATTTCAC 186301 33 100.0 35 ................................. GCGGGAATGTCGGTTGACCAGTACCGGACCATGAT 186233 33 100.0 33 ................................. TCTTATACTCATAATAGATTTCCTCCATGGTAT 186167 33 100.0 35 ................................. CAGTAGGTGTATACTGGCTATAATCGCCACATAAC 186099 33 100.0 34 ................................. CACAAAAAATAGGCTGGAAGAGCTTGAGGACGAA 186032 33 100.0 34 ................................. TCGATGATGGACAGCAACTCATTGAGTAAGTACC 185965 33 100.0 35 ................................. TGTTGCTGCAGGTAAAAAAATGAACGGCGTTATAG 185897 33 100.0 34 ................................. TCTTTTCTCACCGGACAATATCATGTCAAACCAC 185830 33 100.0 36 ................................. CACCATGGTCTGTCCGGGGAGTTGAACCCCGCCCTG 185761 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ==================================== ================== 50 33 100.0 34 GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT # Left flank : AAGTCCTGGAATTTCCGGAGAAATGTGGATTTCTGGCAGTGGCCGGAACAGCGGTGGCCCTGAAAGCGGGAAATCTGGCAGCTGTAATGGAACGCCAGGGCAGGGTACTGCGCATTTACGATGTCAATGATATGAAGGAAGTGATGGCGGAATTTGTCCGTGCGTTCAAGCAGGGAGCTATATATCCGGAACAAAAGAGGCTTGTTTTGAAAGAGTATCCGGCGGAGGCGGCAGAGGCACTGCAGCATGCGGGATATATGCGTGAAATGAAGGATTATGTAGTGTATAAGTAGAGTGTGATTTCTGTGAGGCGGAATCCCATCAAACCAGGTGCGAATGCCAAGCTAACATGAAATGCCTGGGAGATTCGCACCTGAAAAACAGCGGAAAAGCCGTGAAAATAGGCTGGGTGAATGGATGGAGGAGGTTGAAATAAGGAGGGGAGGACATAATGCATAAAAAGTTAGGGGGATGTGGAGGGATTGTTGGATAGTTTTGCT # Right flank : ATAACATGCTTTATATACATATGCTTTTCCTTTCCACCACTGCTGGATATGTGGTTTATTTTAGCTGGCTGATTTCGTGATAGGCTTCCAGAATACCATTTTTGGCTGCTTTTTATACAGTATCAATATCAACCCAATACCAACACTCACCCAATACCACCCCAATACTAACACCAATTCTTAATCATGCAGAACCATTAGGCAATTGCGAAACTCACTGACCAGAATTTATGCACATCGTATAGGAATGAATCTAAATTGAATATATTAAGCAAGATATTTTGTGCAAGGTGAATATAAAAATTCAGAGTTTCGTAATTACCTAATGCAGAACCATTTATGAAAGGAGAGGGAAAAGCCATGAAACAGATGTCATTATTCGATGACAGAGAAGTATACAATCCCCTGGCCAGCAGGCTGCGTCCGGATGACCTGGATGGATTTGTGGGACAGGAGCATCTTTTGGGAAAGGGGAAGCTGCTGCGCCAGCTCATAGAGCA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 853537-855891 **** Predicted by CRISPRDetect 2.4 *** >NZ_UAVW01000001.1 Enterocloster clostridioformis strain NCTC11224, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 853537 32 100.0 34 ................................ GCTCTGGTTGTAGGAGCGGAACTGGCCTGTGTAC 853603 32 100.0 35 ................................ CTGTGAAGCCTGTCCTTCGGCTGTTTCCTGTCCGG 853670 32 100.0 35 ................................ AACTCAATTAGATTCTTTTTTGGCTCTTCTATGTC 853737 32 100.0 34 ................................ AGGATATGGAACGGCTTATGAAGGGGATGGATGC 853803 32 100.0 35 ................................ CCCAAAGCCTCCAGGTAGGTATCATCCGTTTGGTC 853870 32 100.0 35 ................................ ATCCGCTGCATCGCTGGCATTATTCAAGTCCTTCC 853937 32 100.0 35 ................................ GTCCGCGCCAACACCCCGCAGCTGGCCATGATTGG 854004 32 100.0 34 ................................ TGAAACTGCAATTTGACAGCCTTAAAGCCACAAT 854070 32 100.0 33 ................................ CCGGCAGCAGGGCCACCTCCAGGTCCCCCTCAT 854135 32 100.0 35 ................................ GTCACGTCAAATATGATAGGCATATCAGTATCCAC 854202 32 100.0 35 ................................ CTGGCTCATTCCAAACCAACGCACACCGCGTAAAG 854269 32 100.0 34 ................................ AGGCTATAGTTTAGCAGACATTGCCGCCGCTACA 854335 32 100.0 34 ................................ CTTTGGGCGCAAAGGAGGAGCGTACTACAAAGGG 854401 32 100.0 36 ................................ TGGGAGATAACAACCGTGAAACAGAAGTGGTATCCC 854469 32 100.0 34 ................................ CGGGCATTAAATCATTTACCGACACTCCAAAATA 854535 32 100.0 34 ................................ CAGTAGTACATTGATTATATTCATTCAGTGTTAT 854601 32 100.0 38 ................................ TTTTCATCTGCTTCTAAATCCATACAAAGTCTTGCTCC 854671 32 96.9 34 A............................... CGGTATCGATAGAATATAAATATGATTTTGAAAG 854737 32 100.0 34 ................................ CTAAAAATAGGTATAAAAAATACAGCTCCGCAAA 854803 32 100.0 33 ................................ ACCTCCCACTCCCGGAGCGGATGCTTAACCATA 854868 32 100.0 35 ................................ TGTTGTCCTGCGGTTCCCAGGCTCATATGCTCGGC 854935 32 100.0 34 ................................ TCTGATTACTACCCAAAAATGTGCAGCTCTCTGA 855001 32 100.0 35 ................................ AAGATGTCTCTCTGCTTCTCGTCCGGTTTTGCCCG 855068 32 100.0 33 ................................ ATCCTGCAACATCTCCTTTATGATTTCTCCCAG 855133 32 100.0 34 ................................ ATTACCGCTTTCATCCCAGTCCCTCCTCAAAATG 855199 32 100.0 33 ................................ GACATGGGCGAACTTGATACATCGGCCATGGAT 855264 32 100.0 35 ................................ CATACCTATAACAATGATGTGCCCGTGGAGGATTA 855331 32 100.0 37 ................................ AAGGACATAATACACCAGTAACCGGCGGTACTATTGT 855400 32 100.0 33 ................................ CGATTCTCGCGCGCGTATACGCGCATGTGTATG 855465 32 100.0 34 ................................ TCATTCGCAGCAATCCAGTCAATGATGAACTGAT 855531 32 100.0 35 ................................ CGTGGTTGTCCACTTTGCGTCCGGAGTATATACCG 855598 32 100.0 34 ................................ TTGGGGCAACAAAAGGAGCTGCCATCTTGTTTCC 855664 32 100.0 33 ................................ CCGCAGTCTGCGATATGGGCGATTGTTTTATAA 855729 32 100.0 33 ................................ AGCAGTTAAAGGCAGATAATGCACAGTTAACAG 855794 32 100.0 34 ................................ TCCGGGGTAGTCTCATAGCCGTTCACATAATAGC 855860 32 68.8 0 ......G.T......TC....CAAG..A...A | ========== ====== ====== ====== ================================ ====================================== ================== 36 32 99.0 34 GTCTCCACCCTCGCGGTGGAGTGGATTGAAAT # Left flank : GCTGGTACTGATTACATATGATGTGAATACGGAAACCGCCGCAGGCAGGGCCAGGTTGAGAAAGGTTGCAAAGCAATGTGTCAATTATGGCACCCGCGTCCAGAACTCCGTATTTGAATGTATTTTGGATAATGCCCAGCTGATAAAGCTAAAGGCGATACTGACAGATATAATTGATGAACAGACGGACAGCCTTAGGTTTTACAACCTTGGGAATAAACACACTACAAAAGTGAACCATGTTGGGATGAATAAGGGGATTAATGTGGAAGAACCGCTGATATTCTGACCTGGCCGCGGGCGGTAAAGCGGTATAAAGTATTTTGGTGCGAACCTGAAGCAAACATGGATTTACGGGGGGATTCGCACCGGAAAATTTGCACAATGAGAACGGATTTGCGAGTGTGCAGGGATGGTTGGCCGTGATTTGAGGGGGGTGGGATATGATTTGTTTGTGGAAATGTGATGAAGAATAGTAGTGGTTATTGTGTAGTATTTCT # Right flank : ATCCGCCAATTACAGAATTACATCCAGTTGCCCTCTCCTCTGCCCTTTTCGCAAACGCCGCAATCCCTTTTGAACTGCAAAAAGGTTAGGTAAAACTAATTCCGTACAACAAAAAAGATGGGGCATGCCCCATCCCTTTCATAATCTTGTTAGAATGTACAAAGAATGCATACTTCCATTATCCCTTCCATGCCCGAATCTCTTTAAGCCCCGGCACCAGCACCTTAGCGCTGGTTTCCAGAATGATCCGTCCCTTTTCAGCTGTGGCGCCTGAGGGGTCCCCGCCGATTCCGATGGGTTTGCCGTCTTCTGTTTTCCAATCCTCGGATACCCAGCCAATGGATACATTTCCGTAAGGTTTCAGCGCCTGATTGTCTTTAAATGCAGTGGGAATTCCCGCCTCTGAGGTCTCTGACTTTACCAGGGACGGGTCCACGGCCATGACCATGGAGGTTTCCATTTCACCTCCATGGAAGTCCCAGATATTTCCTTCTGAAATC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCACCCTCGCGGTGGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTCCACCCTCGCGGTGGAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.40,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //