Array 1 18781-17131 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPDL010000001.1 Flavonifractor plautii strain 1001283B150304_161114_C5 NODE_1_length_552260_cov_22.9161, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 18780 33 100.0 33 ................................. GGGTTCCCTCCCCTTTTCCAGCTCATGGAGGGC 18714 33 100.0 35 ................................. AGAGATAAGAGGTGAATTAAATATGACCATCATCC 18646 33 100.0 33 ................................. GTCCCGCAGCGCCTCGGGGGTCTTGGCATCGCG 18580 33 100.0 37 ................................. CAAATGATATGAAGCATATACATACACATGCAATTGG 18510 33 100.0 34 ................................. TTAAATTTATCGGGCATATCCTGAAAAGCACCCG 18443 33 100.0 35 ................................. TGTCCGAGTTTGACAGTGAGGATGATGCAAAGGAA 18375 33 100.0 34 ................................. TAGTGTAAGATATTGCACACCCCACTGACAAGCG 18308 33 100.0 33 ................................. AAAAATTATGAAAGTTGTAGCGAATGGGCAGAA 18242 33 100.0 35 ................................. CTGGCCGGGGCATCATAGGTGTTGACGATGTCCAT 18174 33 100.0 34 ................................. TATGACACAATCACCGGGAGGCCCGTCGGCAACC 18107 33 100.0 35 ................................. CATGCGAGACTTTTCATCTTCGCCCAAGGCAAGCA 18039 33 100.0 33 ................................. TTTTGTTGCGCCTTTTGGGCGAATCCTTCGCAA 17973 33 100.0 33 ................................. CATCCGGCGTCCGCCTTGACCGTGCCATCAATC 17907 33 100.0 34 ................................. ATTGTAGAGGTAAAATCAACCCATCCGCCGCCGG 17840 33 100.0 34 ................................. TGTAAGGCCCCTATATCATCTAACCAGCCTATAA 17773 33 100.0 36 ................................. GGAATTAACTCTATCGCCAACTTTTACAGCAAAACT 17704 33 100.0 33 ................................. AGCAGGATATCCACTATCAGACTGCGGGTTATA 17638 33 100.0 35 ................................. CTCCGGCAACCTCTCCTTGACGCTGATCCACTCGC 17570 33 100.0 36 ................................. CATAGGCATCCTCGTTAAATGCTCTACAATTTGTAA 17501 33 100.0 34 ................................. AGCAAAGGCAAGGCGGTGAAAAATCACCGCCTCC 17434 33 100.0 35 ................................. TGGTTTGTTAATCTTAAATATGCACCTACAGAATC 17366 33 100.0 33 ................................. ACCCTTGGAGTTATAAACACGCTGGTAAACACC 17300 33 100.0 38 ................................. AGTGAGAAATACGACATCACCAAGCATCCCCGGTATAA 17229 33 93.9 34 ............A............G....... CAGCGGCTGGACCGCGGCCACATGGAGTATGTCT 17162 32 93.9 0 .................-.............C. | ========== ====== ====== ====== ================================= ====================================== ================== 25 33 99.5 34 GTCGCACCCCTCGCGGGGTGCGTGGATTGAAAT # Left flank : GGACGCCTATCCACCCTTTTTGTGGAAGTGAGGCCATTATGCTGGTTTTGATTACCTACGATGTCAATACAGCGGATGCCGCCGGGCGCAAACGCCTGCGGCAGATCGCCAGGCAGTGCGTCAACTACGGCCAGCGGGTTCAGAACTCCGTCTTTGAGTGCAAGCTGGATCCGGCCCAGTACAAGCTGCTTCAAGCCAAGCTGTGCGCAATCATGGACCCCGAACGGGACAGTCTCCGCTTTTATTCCCTGGGAAATCGCTATGAGCAGAAGATCGAGCACTTTGGCTGTAAGCAGACCTACCTTCCAGACGAACCTTTGATTTTGTAGCGTGCGAAGTCCAAGATGACACGCCTTCTCCGGCCGGTTCGCACCCAAAAAGCATAAAGGAAAGCTTAATGGAGCATAGGCGCGTTTGTTTTTGTATGCTCAGCCTTCTTCCCCTTGTGCAAATAAGCAAATTGAGCCAAGCAAACTCCCTGCTCTTTGGTAAAGTTTGCT # Right flank : GTCTTACAGGGGCGCCTGGTCAGTTTGCAGGAGACGCCGCATAGGGGCGCGGGTCGATTCAAATTTTCACCCCGCGCCCCTGCTGTTTGCGTTTCTTTTCGTTGACTGGTATAGTAGGGAATGATATAATAGGATGATTATGACAAAAACTATGGTGGGAAGATCATATTATGTGGATTTCAAGTGACTGGAAGGACTATGAGCTGCTGGACTGCGGCGGCGGCGAGCGTCTGGAGCGCTGGGGCAAGTATCTGTTGGTGCGGCCCGATCCTCAGGCCATCTGGCGTCCGGAGGGGCGGCATCCCGGATGGCGGAGGCACGACGCCCGGTACCAGCGCGCCTCCACCGGAGGGGGCCAGTGGGTCAAGAAGGAACTGCCCCAGCGCTGGACATTGGGTTACAAGGGGCTGACCCTCAACATCAAGCCTATGAACTTCAAGCACACCGGCGTCTTTCCGGAGCAGGCGGCCAACTGGGATTTCGCCATGGAGCGCATCCGT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCTCGCGGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTCTCGCGGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.90,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //