Array 1 25700-24890 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADCKU010000027.1 Enterobacter cloacae complex sp. P24RS contig_0027, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 25699 28 100.0 32 ............................ AAAGGACTTATGCGGTTACAATCCAAATAGAA 25639 28 100.0 32 ............................ TTTGCCTGCAAATTACAGTGCTAGAGCTAATG 25579 28 100.0 33 ............................ TGTAAGCCATTTTCACACCAACCCTCAACGAAT 25518 28 100.0 32 ............................ AACGGCGTGAGCAGTATTTACGACGCCCTGGG 25458 28 100.0 32 ............................ TGCACCCGGTCGCCAAGCGAGTCGTTCTCGTC 25398 28 100.0 33 ............................ CTGATGCTTATAGCTGCCTGGCTAACATTAGAA 25337 28 100.0 32 ............................ TTCACGCCGTCCTGCGTGGTCATTACATAAAG 25277 28 100.0 32 ............................ AACAACCACGAACGGAGCTATAGTATCTGTAA 25217 28 100.0 32 ............................ GGCATGAGAGAGAACAGCCTCAAGCGCCCGCT 25157 28 100.0 32 ............................ GGTAACGCCGCGTCATAGCTGTTTTTGATATC 25097 28 100.0 32 ............................ TGGACTTCGTCAGTCATTCTCAGCGCCACCCG 25037 28 100.0 32 ............................ GGCATGGAGTGAGCAACAAAAGCGGCAGGTAA 24977 28 100.0 32 ............................ CACAGCGACATGCTGCGGTACAGAAAGGAACT 24917 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 14 28 100.0 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AGCGTGCCACACGCTCGCTCTCGTCTGGCGTCAGCGTCCGGCCTGCGCTTTTGCGGCGGGCAACGTTACGCTCGTTGATTCCCGTAACGCGTAAAATCTCCGCTTTCGACATGTCCGTCCACTCGTGAATATTGTCGAGGACGCTGACGGGTAATCCTTGATTAAGATACTCAATCAGCCGCATACCTCTGTTTGCAGGTAAACCAGCGTAGCGCCACAGCGTGTTGTCAGCAGGTTTTTGTGCGGGGACCCATGTTCTCATGATACCTCCCGAATAATGTCATTTGTCATATATAAGTATAGTCATTTGTCAGGTGCCAGGGAATGGGTATTTTTTGTGCTGAGTGGGTTATGAAAGAGTGGGTTTTGACCCTAATTTTCGATAAGAAATTAATGTATTGATTTTAATATGCATTTTTAATTGGCGAGAAAAAAGGGTAAGAGGAGGGCGTTTAGCTTTTTTTGTATGAAAATCATGTTGGTGTGGAGCTATTATTCCA # Right flank : AATCGTTCAAATAATCGACTGTCCTGACAAAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAATTTCAGCGTATTGCCCAAGCGTCACGGTACAACCGAACGGAAAGCGCATTCGTAAAGGGGAGACGACAGGATAAACGTCAGGACGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 5890-4598 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADCKU010000019.1 Enterobacter cloacae complex sp. P24RS contig_0019, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 5889 28 100.0 32 ............................ AAAAACAAGGCGGCAGGATGAACAAACCACAA 5829 28 100.0 32 ............................ TGGGCGACGGCAGCAGAGGATGCCGCTTCACC 5769 28 100.0 32 ............................ GATAGTTAAAGTGTGGAGGGACGAACTAAAAG 5709 28 100.0 32 ............................ TTAAAGCCCCGCAGTTACTGGATTAAACAAGC 5649 28 100.0 32 ............................ TATCGCATGGGGGTAAGTAACTGGCAAACCGT 5589 28 100.0 33 ............................ ACCCATAACCGAGGGTCTGCACTTAGCGTTCGT 5528 28 100.0 33 ............................ TTTGGCTCGCTGGCGTACTCTGGAAGCAATGCA 5467 28 100.0 32 ............................ TGATCGTCAGCGAGATCCAGATGGGAGAATTT 5407 28 100.0 32 ............................ CCAGGCTTCACAGCCCTCGGCCTGCATCAGCG 5347 28 100.0 32 ............................ GGCATCAATCTGATTCTGAACCCAGCGATCCA 5287 28 100.0 32 ............................ CGCCAGCCATCGGTGCGGTGACCGATGACGTG 5227 28 100.0 32 ............................ ATGGAGTCAAACCGCAGGCGCCAGGCAGAAAT 5167 28 100.0 32 ............................ TGAACGCGAAAAAAGCAAGATTGAGAGCTACG 5107 28 100.0 32 ............................ AACTGAAAGCGGCGCTTGTCCAGGCTGACGCC 5047 28 100.0 32 ............................ AATGATAAAGGGCGCATTGTGTGAGAGCCTCG 4987 28 100.0 32 ............................ GATCCGCCAGGGCGTGCAACGTCCATTATGTT 4927 28 100.0 32 ............................ AGGGCAGAAAGGGCGCTACAGGCGCAAACGGC 4867 28 100.0 32 ............................ GGGCGGGATGGTTGCGCCGTTGTTCTGCAACG 4807 28 100.0 32 ............................ ACCGAGGCTCGCCAGCACTAACTGACATCCTC 4747 28 100.0 32 ............................ TTCTTACTTCTCTGGACATTTGCAATGGACAG 4687 28 96.4 32 .........................T.. AGCATCGACACAAACATAGTTAGAGTGTGGCT 4627 28 82.1 0 .....T...T.....A.....AC..... | TC [4601] ========== ====== ====== ====== ============================ ================================= ================== 22 28 99.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CTCCCACAAACGCAGCCCGTTTGCCGATGTCTCGGAGCTTATCTGGAAGAGGTAAAATCCGGCCTCGCAGAATCCCTGCGCGACTTTCAGGTGGTGGAATTTGAGGACGAAGCGGAACAACCGCGACAAAAAGAGTGGCTGCTGGAAGATACCGAAACGAAATGTGACTACTGCCGAGCGTTAAACCATGTGCTGCTGGTGTCGCATTTTGACCGCGATATGCTGCCACACTTGACGGGGCTGTTGCATGACATTACTCATTCTATGGCCGCTGATGTCGTTGCACCTCCACATGCAGAATCGGTAATTCACATCATTTCCTGAGTGTAATCCGAGGCGTCGGGGGCAGGCCTCTAACGCCGCTGGCTTGACCCTTTTTTTTGATGTTTACGTAACGTATTGATTTATACAATGCAAACTTACGTGCCAAAAAAAAGGGTTTTATGCGCGAAAGTTGATTATTTTGTTTTCAAACAATAAGATGGCGTGGTTTTCGTTCA # Right flank : CTCAATCCGCTCAAACATTCACACTATCTATTCAAAATTAAATACCATCATACATCCATCTCTATTTTTTAAATTAAATAAAAAACCCATTCATACATCAATCATATTGCTAAATATATATTATCCACAAAAATAATAAATCAAAAAGAAAGGTCATATTTCATCCGTCTATTACAGTAATTCCTATTCATTTGATACCCGTCACATTTGTCCTCATCTTATGTTCGATAACATACCCGCATTCAACGCATTGAACTAAAAGCCCTTTATATGTCTGTAAACAGCATCACCCCCACGGATTTAAAAAGTATTCTGCATTCAAAGCGCGCCAATATTTATTATCTTGAAAAATGCCGTATTCAGGTGAATGGTGGACGCGTTGAATACGTCACTCAGGAAGGTAAAGAATCGTTTTACTGGAATATTCCCATCGCCAATACGACAGCGGTGATGCTGGGCATGGGAACCTCCGTGACGCAAATGGCAATGCGGGAGTTCGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //