Array 1 5186-3804 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMRO010000016.1 Intestinimonas butyriciproducens strain D59t2_181005_A6 NODE_16_length_63419_cov_29.2199, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 5185 33 100.0 33 ................................. TTTACGAAAGGGGACAGCCGTTCATAATTTGCG 5119 33 100.0 36 ................................. ATTCCCCAGGCCGTGCAGCCTGCGGACCACCCCGGC 5050 33 100.0 36 ................................. ATTCCCCAGGCCGTGCAGCCTGCGGACCACCCCGGC 4981 33 100.0 36 ................................. ATTCCCCAGGCCGTGCAGCCTGCGGACCACCCCGGC 4912 33 100.0 35 ................................. CTCCAGGTTCAAGGTCCCACCCCCTCACCGACGGC 4844 33 100.0 34 ................................. GTGGAGATCCTGGAGCTATGCCTGGAGGCTGCCG 4777 33 100.0 35 ................................. TTCGTCAAAGGTGCGACGGTTGCAAAAAAATGCAT 4709 33 100.0 33 ................................. GTTCCAGTTGATCTTTTTCATGGTATAATCCTC 4643 33 100.0 33 ................................. GTAGATATCAGGGCTCCCACCATGAGCCGGCAG 4577 33 100.0 35 ................................. CGGCATCCCATCCAGACCATTAAGGCCACCCTGAG 4509 33 100.0 33 ................................. TGAAGGAGTCCTCCAGTTCTGAGAGCCAGACTG 4443 33 100.0 35 ................................. AGGAGACCAGTGTGCAGTATATCGACCGCCTGGAG 4375 33 100.0 33 ................................. AAGTATACGCTGAAGGACGACTTCGTGCGGACG 4309 33 100.0 36 ................................. GATCCTGAAAAGATCACCCTGCTGGTGGATGGGGTC 4240 33 100.0 36 ................................. TCGCTCTGTGCCGCGCGCAGGTCAGATCGTTTGCTC 4171 33 100.0 34 ................................. GCACGTACATCTATTTCTAACCAGGGGGGGAGAG 4104 33 100.0 36 ................................. TTTCCGTAGTTGTTGGAGCTATAATAATTGGACAGG 4035 33 100.0 33 ................................. GTCCTCGCCACAAAAATTACCGTGCAGGAATCC 3969 33 100.0 33 ................................. ATCATGGGCGACGGTGGACGCAAGGTGAACTAT 3903 33 100.0 34 ................................. GCGGCCTCCAGCGGGTCCGGTGCCGGGTGGCTGG 3836 32 78.8 0 ...................-....A..CTCC.C | C [3821] ========== ====== ====== ====== ================================= ==================================== ================== 21 33 99.0 34 GTCGCCCCCCACACGGGGGGCGTGGATTGAAAT # Left flank : ACTTGGACGCTTACCCACCTTTTTTGTGGAAGTGATAGTATGCTGGTTTTAATCACCTATGATGTGAACACCGAGGACGCCGCTGGCCGCAAACGTCTGCGGCAAATCGCGAAGCAGTGCGTCAACTACGGACAGCGGGTGCAGAACTCTGTCTTTGAATGTCTGCTGGATGCGGCCCAGTGCCGCATGTTACAGGCAAAGCTGTGTAAGATCATGGACCCGGAAAAGGACAGTCTTCGTTTTTATTACTTGGGAAACCGCTATGAAAACAAGATCGAGCATTTTGGAGTAAAGGCATCCTACAACCCAGAAGATGTATTGATGCTTTAGGTGCGAAACGTAAGCGCGCAGAAAATCGCCGAGGTCTCGCACCAGATTTTGCAGTATTATCTGTAAGGAGGCAACCTTATTTTTCAAAATCGGATAAGAGTTAGAAGAGGATATTTGTAAGAATTGTCTATTTTTCACGAGAACAGCTTGAATTTTTAGCTGTTTTTGCT # Right flank : TTTATACGGTCGCTCACATATGGATAAGACCGCTAAAAAATCCAATGAATCTTTCGTAACAGCATCCTATCCTACTTCTAACAAATTTCTAACAGAACGATAAAAAATGAATATCCAACAGGCCCAATGGTTTCTGAGATTTTATTCCGCATGAAACCCGGAACTCCTTGTGCCACAGCGGTTTTATGGGGTATTACCAGAGACAGCCAAACACCCGTAGGAACATACCATGCCCCCTTCGAGTTCTGCTGTCTCCACCAGAAAAATCCCCGGAGCCGCAAGGCTTTGGGGATTTTTCGTTTTTGGTTAATTTTTAAATGTGACATTTCTTTGTATCAAATGTGTTTCTTTTATGAATTTTAGCACTCCTATATTGACAGTGCTAAAACAGAGGACTATAGTAGAGCCGTACCAAGGGAAGGGGACCAGAAAAGGTCTTCTCTGCAGGGCAAAAAGGTAAGACAACGAATGGAGGAATGACTTATGTTGCCCAGCATTTT # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCACACGGGGGGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCTCCACACGGAGGGCGTGGATAGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.80,-10.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.15 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //