Array 1 144330-143570 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAMC01000002.1 Sulfitobacter donghicola DSW-25 = KCTC 12864 = JCM 14565 contig2_scaffold2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 144329 35 80.6 30 TCGAAA..-........................... ATGTCCCAACGATGCACGACTTCGGTGCGT 144264 36 100.0 30 .................................... TTTGATAAACACCACCGCGCTTTGCGCCGA 144198 36 100.0 30 .................................... GCAGGATGATATTGACGCGCTGTGTGGTGA 144132 36 100.0 30 .................................... ACATCAGCACTTGCCCAAATATCCACAGCA 144066 36 100.0 30 .................................... CAATCGCGCCCCCGAATAGAGCCGTTCTCT 144000 36 100.0 29 .................................... ACAATGAGCACCGCAACAACATCCGCAGC 143935 36 100.0 30 .................................... CAATCAACGTGACTGATGTGAAGCTGCAAG 143869 36 100.0 30 .................................... AGGTCTTCGAGGTTAGAGAACGCAGCGATA 143803 36 100.0 30 .................................... TAGCGTGATTGACGAAGAACAAGCTACATC 143737 36 100.0 30 .................................... GAATGAAAAGAAGCCCCGCCGTAACAAGCG 143671 36 100.0 30 .................................... TGAAACAACGGTCAAGGCAGATGTATTCCT 143605 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 12 36 98.4 30 GTTGCGGCTGGACCTCGGATTTTGAACAGCTATTCT # Left flank : CCGCCGTTGCCTGCAATGGCTGAGAATATCCCGCAAATCGCGCAAGCCACACACTCGCACGCATGGCCACACTGAGGTTTTCGTCCTGTTCTGATAGCTCGATCATGCGCAGAATTGCCTTATGCCCAGCGCCTTTACGTTGCATCTTTGTGAGCTTGGCGAAGATCTGCTGACCATGCCTGCTTGAGCGAAACCGATAAAAACTGCGCTCGGTGATCCCTGCGGCCTTGGCTGCTGCGCGCCCTGTCGTCTCCTCCCCTGTAACTGACACACATGCGGCGGCAATTGTGGCGGGTCTGGTACGGCTTTCGGCCGGTTTCCAGCCATTAAGGGCCTCAAACAACCCAATAGAGAGTGGGTATTCCTTAGAATTGAGGGCGATTTGGTCGGATTTTGACATTCGTCGAACATAGCAACCGGGTAGGCGGTATCAGAAGCACCTTCCCGTTCGGCCCATTGCGGACCTTCGGGACCCTGACCGGATGCTGCGGTGCAGCGTC # Right flank : GGACTCCCGTGTAATTCCTTGTTTTCACAAGAAAATACACGGTTAACGTTCGAGTTTTCTGATGTGGTACGCATCAAAACATCACCAATTGCTCTGGATTCTTGCGGGCACTCTTCCTGCCCTGATCCGCGAAATGGACGATATCACGGTATTGGCGGTCGGTGAAGTTGAGGATTTGGATATCTCCGGTTTCAGGTAAATTTCGCTCGATTCGGTTCACACGGGTCTGGAATGCCTCTTTGCCATTCACAAAACGGGCGTAGACAGAAAACTGACTGCGCTCGAACCCATCATCCAAAAGAAAATTCCGAAACGCTGTTGCCGCTTTGCGTTGCGGTTTGGTGTCGGTGGGTAGGTCGAACATTACCATGATCCACATCAGTCTATACCCCGATAATATGTGGGTTTCAGTCGCCATTGCATTGCCCCAGACTTGCAAGTGTCAATTTGTCAGGCGGGTTTGGCAGAGCGAGGCGTAGCTTCGTGGCCTCGAAACTCTG # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGGCTGGACCTCGGATTTTGAACAGCTATTCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [12,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTGCGGCTGGACCTCGAATTCTGAACAGCTAAACT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.40,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.05,4.87 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //