Array 1 1632-448 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JWFI01000236.1 Klebsiella pneumoniae strain 1035_KPNE 681_7493_91222, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
      1631	    29	  93.1	    32	............TG...............	TCGTGTTGTCCACGGTTACCCGCTGGCTGGAA	
      1570	    29	 100.0	    32	.............................	AGGTATTTGACCTCATCCAGAAAGGCACAGAC	
      1509	    29	 100.0	    32	.............................	GCACCCTCACGGATACCTTTTGCACAGTGTTA	
      1448	    29	  93.1	    32	............TG...............	TTACCAATGGGGAAAAATCTTCATTTGTAAAT	
      1387	    29	  96.6	    25	.....T.......................	AACATCAGTGGAAATCCACTGCGGC       	Deletion [1334]
      1333	    29	  96.6	    32	......T......................	CGAAAACGGCAACCTTCATAAAAACGTCTTTT	
      1272	    29	  93.1	    32	............TG...............	CCGAGATTGAGTAAAGCAAAGTAACGGCGGTG	
      1211	    29	 100.0	    32	.............................	TGTGTGTTGGCGTTCGTTAAATATTGTTAGTA	
      1150	    29	 100.0	    32	.............................	CGGTAACGCAAATGTGATCCGATGTCGTCAGG	
      1089	    29	  93.1	    32	.............T.A.............	AACAATTTGAAGTTTCTGCGCCAGGTCGTTTC	
      1028	    29	 100.0	    32	.............................	AGCAGTTCGAGGAATAGTGACAGGCAGTGCAG	
       967	    29	  93.1	    32	............TG...............	TTAATGTTTTGTTAATTTATGAGTGTGGTGAT	
       906	    29	  93.1	    32	............AC...............	AGCAAATCGAAAATCCGGCTGTTTGAAAAATG	C [901]
       844	    29	  89.7	    32	.............T.A............C	CATGAGCCTGCGCACTCTGACGCGCACCTGCT	C [839]
       782	    29	 100.0	    32	.............................	TGAGGCTGCTGACGGAGAATTGGGACCTGTTC	CC [776]
       719	    29	  96.6	    32	..............C..............	CCGACCCGGTGCCCAGGAGAACTGGCTGAATA	
       658	    29	  93.1	    31	.............G.A.............	TTCCCTGCACTAAGACGCTGGTGGTCGCCAC 	
       598	    29	  93.1	    32	...C......................T..	CCGGTTCGGATTTTGCGAAACAGGTGCAGGGC	
       537	    29	  96.6	    32	.............T...............	GGCATGAGCGAGAACCACTGCGAGAGTGTGGT	C [532]
       475	    28	  86.2	     0	..........A.....T......-....A	|                               	
==========	======	======	======	=============================	================================	==================
        20	    29	  95.4	    32	GTATTCCCCCCGCATGCGGGGGTTATCGG	                                	       

# Left flank :   GATAAAGACACCAAAGCTGAGCTTCAAATCAAAGTACGGGAGCTCGATGAAAAAATTCAGGCCCGCAAAGATCAGAAGCAGGAATCTCGCGAGTCAATTCGCCGCCCGATTGACCCGTATGAAGCGTTTATCACCGGCGCAGAACTCAGCCATCGCATGAGTATTAAAAATGCGACTGATGAGGAAGCAGGGCTTTTCATTTCTGCATTAATCCGCTTTGCAGCCGAACCACGTTTTGGCGGTCATGCGAATCATAACTGCGGTCTGGTGGAGGCTCACTGGACAGTTACGACCTGGAAGCCGGGTGAACTGGTACCAGTTACACTTGGAGAAATCGTCATCACACCGAATGGTGTTGAGATTACCGGGGACGAGTTGTTTGCTATGGTAAAGGCATTCAATGAAAATCAATCTTTTGATTTCACTGCCCGCTAACTCCAAAAGCTGGTGGATTTTAGTGGCGCTATTTAATATTTTATAATCAACCGGTTATTTTTAGA
# Right flank :  ACATAGAAACCGCAATGGTGGGGCTTTTGTCATGTGCCCCTACAAGCAGATGGGACTTTTTACAATCAAGGAAAGTTACTTTCCTGGATAACCCACTTTCTGCCATCTTTTGTCTCAAAGGGTACTCCCACCGTGGCAGGTGGGAGGGGAATTTGAATTGACGCGATAGCGTTAAAGGAACATTTAGCCGCGCTGGTGCTGAATGTAGCGCTTTACGACTTCCAGCGGTGCTCCACCACATGACCCAACAAAGTAGCTGCGTGACCAGAGAACAGGCTTACTGTACGCCTCCCGCAAATCCAGAAATTCATTCCGTAGCCGCCGACTTGTGACGGCTTTCAGGCTGTTAACCAGTTTTGACAGTTGCACAGTTGGTGGGTATTCGACCAGCATGTGAACAAACAGTTTTAAACCGAACCAAAGCAGACTGGCAAGGTTACAGCGCCAG

# Questionable array : NO	 Score: 5.44
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:-0.01, 8:1, 9:0.43,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTATTCCCCCCGCATGCGGGGGTTATCGG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [6,2] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 93% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-5.20,-5.90] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [17-8] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [51.7-68.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,5.55   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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