Array 1 125071-123215 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMRG010000015.1 Klebsiella pneumoniae strain D43t1_170807_C5 NODE_15_length_133590_cov_28.35, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 125070 29 100.0 32 ............................. TTTCTTGATGCTATGTTGAAGAAGATGAGGGG 125009 29 100.0 32 ............................. ATTTGGCAGAGGCTGGTCGTGTCGATGTCGAA 124948 29 100.0 32 ............................. ATACGTCTGTTACTTTGCTATTATTAGAAAGC 124887 29 100.0 32 ............................. TTTCCTGTACTGTTCAGTTGCATAGTCCAGCA 124826 29 100.0 32 ............................. AAATCGCAACGCACATCGAAGCCGGAAAAGTT 124765 29 100.0 32 ............................. AATACACGGGCGTTCAGGTTAAATATTTTGAC 124704 29 100.0 32 ............................. TGTCATACGACCTGGTAAACGACCGTTCCATG 124643 29 96.6 32 ..A.......................... GTTTTGTCGACAAAGTACGTCTGCTCTCTTGA 124582 29 100.0 32 ............................. GTTGTCAGTCAGGGAAAATCTATCCGCAGGGG 124521 29 100.0 32 ............................. TGATTGTCGCTATACCAGCGCTCAAGGAAAAT 124460 29 100.0 32 ............................. GTCAGATCACGTCAACCACGCTTGATTTTACC 124399 29 100.0 32 ............................. CTCACTAACGCCGTTGCCTGCGATAGCTGATG 124338 29 100.0 32 ............................. CTCCGTCACCAGTTCTGTGCTATCCGGCACAA 124277 29 100.0 32 ............................. CTCGGTGACCGGCAGATCGTTTTGAAACACAT 124216 29 100.0 32 ............................. CGTCTGGCGAGGTTTACGACGAGCTGACGTTC 124155 29 100.0 32 ............................. TCACGTTTGCAGAACTCGCGGAGGAAGAAGAA 124094 29 96.6 32 ..A.......................... AACGTAATTGGCTTACGGGGCGGTCGGCACAA 124033 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 123972 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 123911 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 123850 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 123789 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 123728 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 123667 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 123606 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 123545 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 123484 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 123423 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 123362 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 123301 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 123243 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 31 29 99.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGAGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //