Array 1 11402-8395 **** Predicted by CRISPRDetect 2.4 *** >NZ_UXEY01000025.1 Flavobacterium psychrophilum isolate 29-SE328_S12_R1.fastq.gz, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== =============================== ================== 11401 46 89.1 30 TGC.G...G..................................... AACCAAGTTCACAAGTACAAGACAAATTAT CT,T [11388,11394] 11322 46 100.0 30 .............................................. AAAACAGAAGTGCAAATTAGCAAGGAAGTA 11246 46 100.0 30 .............................................. TGGTTTGTTCCTTCGGATTTATGAGATGGT 11170 46 100.0 30 .............................................. TAAAGAAGGTACTAACGTACCTGTGGGTTT 11094 46 100.0 30 .............................................. ATATATTTGTACCATAAACAAACAAACTCA 11018 46 100.0 30 .............................................. AAAATAAACCAAGCGTGTCAGACGATTTAG 10942 46 100.0 30 .............................................. ATTGAATTAAAAATGCTTCAAGACACCGCT 10866 46 100.0 30 .............................................. CCAAATGAATAACCAAACAACGTTGAACCT 10790 46 100.0 30 .............................................. CTCACGCCTGAAGTTCTCATAGGCATTAAT 10714 46 100.0 30 .............................................. TTACGAGCCAATTAACAGTAAAAAATACTA 10638 46 100.0 29 .............................................. CCTCATTCCTGCTTCATCTGGATCCATAC 10563 46 100.0 30 .............................................. AATATGCAACTTACGGATTGTTTCTTCGTC 10487 46 100.0 30 .............................................. ATTTGAATTATTATTTCAATCTGAAAGAGT 10411 46 100.0 29 .............................................. AATTTTCTAGTTCCGTTAATGCCTCTTTC 10336 46 100.0 30 .............................................. ATAGTTTAAAAAAAATATTTGCAAAACCAA 10260 46 100.0 30 .............................................. GAAGCGGTGGTTATTCCAGAAGTAAAGCCT 10184 46 100.0 30 .............................................. ATGGAGAGAATTACAAACCACACAAACCAA 10108 46 100.0 30 .............................................. CAACGCCAGCAAGCACAACACCAGCACCAC 10032 46 100.0 29 .............................................. ACGTTCAGAATTTCACAACAGAATTGTTG 9957 46 100.0 30 .............................................. TGACAACGGGATAGAAGCAAATGTTTCTAA 9881 46 100.0 30 .............................................. GAACTTCTAAAAAAAGAAACAGAGTACATC 9805 46 100.0 30 .............................................. TCATTAACCGACACCGTTATATTTCCGCCA 9729 46 100.0 30 .............................................. TGTATGCTAAATACCAATCTGAGGGTTACA 9653 46 100.0 30 .............................................. TAGAGGCTAATGCGTGGCATGGTGCTACAG 9577 46 100.0 30 .............................................. TGACTGGGCAAAAGTAGCCGTAATAGACAC 9501 46 100.0 30 .............................................. TGATTTTCTTGAATATAGTATTTAGCACGT 9425 46 100.0 31 .............................................. GGAACCATATTTGTTATTAAATATGTATCAT 9348 46 100.0 30 .............................................. GCTAATATGTGGCTCCTTAATGGCACACGA 9272 46 100.0 30 .............................................. GCAAACCGAGTTAGAAATCGATTCGATGGT 9196 46 100.0 29 .............................................. TTTCATATGAATTGGGGCTGGTCAGGTAG 9121 46 100.0 29 .............................................. TTATTGTCACGCTTCACGTCTAATGTTTC 9046 46 100.0 30 .............................................. CTTCAAAAAAGATTGTACGAAGTACTATTG 8970 46 100.0 29 .............................................. CAAAATGGAATATAGCGTAGCCGAAATCA 8895 46 100.0 30 .............................................. ATTTATGCGTGAAATTAGATTGCCTGTTTT 8819 46 100.0 29 .............................................. ATAAACAAACTTACGATAACAATGGCTAT 8744 46 100.0 30 .............................................. TCAGTTGCTTCAATTGAATTGCCCAGCATT 8668 46 100.0 30 .............................................. CCATTGTCTTGTATCTCCTTATCATATTGC 8592 46 100.0 30 .............................................. AGGAGTCGATTTTATTGTTTTTGTGCCCAC 8516 46 100.0 30 .............................................. TCTTATCTACCTTTCTCGAGTCTAATTCTG 8440 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== =============================== ================== 40 46 99.7 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : CACTAAAAATAAAATGTCATTCCTTACTGATGATGCGGTTCTAAAATCAGTTTATTTAGCTTTAAAAGAAGCAACAAAAAAATGGTCAATGCCAATACAAAATTGGGGTATTGTTTTAAATCAATTTAATCTTATATTTGACAAAAGGCTCAGATTATAAAATCCAAGCCTAACTTTTTAACTTACACACT # Right flank : ATACCGCGAGTTAATCGTTTGATATGTTGGTGGTTATATGCTTATTTTGAAATTAAAAAACAGTTCTGTTTGTGTGTTGATATTCTGGTAGGTCTAATATTTCTAAATCCTATTTTTCAAAAAAGTTCTAATTGTTGCGAAGGTTTGTCTGTTTCTACAGGTTTTTTTCCATAAAAAAGCTCCATCATACCAAATTGTTTATCGGTTATTTGCATCACACCAATTTTGCCATGTTCGGGCAAACTATTTCTTATTCTTTTGGTGTGTACTTCGGCATTTTCTCTGCTGGCACAAAACCGCATATAGATCGAAAATTGAAACATAGAAAAACCATCGTCCAATAATTTCTTGCGAAATTCACTGGCAATTTTACGCTCTTTCCGCGTTTCGGTGGGCAGGTCAAAAAATACTAATATCCACAAACTTCTATACTGGTTTAAACGGGTGTAATGTTCGTCATACATAAATAGGGTATAAAATTTTTCTTGCGGCTCCCGCAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.90,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //