Array 1 1878-325 **** Predicted by CRISPRDetect 2.4 *** >NZ_LRCC01000089.1 Klebsiella aerogenes strain GN02761 GCID_ENTE_00228_NODE_18.ctg_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1877 28 100.0 33 ............................ TTGAGGTAATGGCGCAGTCTTCACAGCAAACAC 1816 28 92.9 33 ......................G.G... TTATCCTGCTGCCAGCCTAAGCGCCCGTAGTTT 1755 28 100.0 33 ............................ TAGTTTGCTCTGGCAGCATCGATTAAAAATTTT 1694 28 100.0 33 ............................ CTTATCAACCTCTATCGCTGAGGGGTCAGGCGC 1633 28 100.0 33 ............................ TATTGTCCCAACCAGCGCCCTCTTTCGGGTACA 1572 28 100.0 33 ............................ CGTAGCCAGGCTTGCTCGTACACCTCAAGACGA 1511 28 100.0 33 ............................ TTGTAGAAATTAAGACCTGCTATATCCTGTAGC 1450 28 100.0 33 ............................ TCAACATTGCTGAAAAAGCTGAACGACGGAAAT 1389 28 100.0 33 ............................ TTCCGGGTTGGTGATGATGATCATATCGGTACC 1328 28 100.0 33 ............................ CCGGGGAATCTACTGCCTGAAGGGTTGAGCCAA 1267 28 100.0 33 ............................ TAAATTTTATCGTCGCGGTCTTTGTGGTCGGGG 1206 28 100.0 33 ............................ CACACACCAGGAGAAATAAGTGTCGACTATTGG 1145 28 100.0 33 ............................ CACCGATTGATGCCGCGCCGTAAGCACGATTGA 1084 28 100.0 33 ............................ TTTATCGACTGGTCGAAAGATGCGCTGCTCACT 1023 28 100.0 33 ............................ CGACAGCCACAAGTGAATGAGGTTAATAGTGGC 962 28 100.0 33 ............................ CGGTGAACGCGTTGCACTGCGTAGCGGTGGCGT 901 28 100.0 33 ............................ TCCGCTTTAACAGCCAGCGACGCCAGCGCGTAT 840 28 100.0 33 ............................ TCCTCAAGTGGTACGAGGACGGCGACAATAGCG 779 28 100.0 33 ............................ TAATTACCGCGCCTTGCGGGACGTAGGTCTCGG 718 28 100.0 33 ............................ TGAGCACGGGCTGACCATCAGTTTTGCTCGCAA 657 28 100.0 33 ............................ CAATTCACTGCGCTTGATGGCAAGGTGGATGAA 596 28 100.0 33 ............................ CGGGATTATCTCACCCTCAGAGAGCGAATCGCC 535 28 96.4 33 ................A........... TGGACGGCGACGTTGATCCAACCTGGTACCCTG 474 28 96.4 33 ...........A................ TACGGCACCGAATCGCAGCTGCTGGCTCAGGTT 413 28 96.4 33 ...................A........ CGATGAATGGCCAATGATGACGGCATCCCAGTC 352 28 96.4 0 ..............G............. | ========== ====== ====== ====== ============================ ================================= ================== 26 28 99.2 33 GTCTTCCCCACGCACGTGGGGGTGTTTC # Left flank : TTTACAAAGAGCGGCTCTGTATCGATCTGGCGTTTTCGCTGTCGAGGGAGATGGCGGGGCGATACGATAAACATAAAGTTTCTGAGGCATTCAGAAAACGAGTGATAGCCCTGGATTTGCTCAACCTGATTGCGGCCGATATTAATGAGCTAATGGGAGGAAAACGTGCTCGTCGTACTGGCAAATGATTTGCCGCCAGCGGTTCGAGGGCGAATGAAACTGTGGTTTGTCGAACCCCGGCCGAACGTTTTCGTCTCAGGCGTCAAAGATTCGGTTGCGCAAACCGTCGTTGATTACCTGATGCAGTACACGCCCGCGGAATCAGGCCTGATGCTGTTTCGCAGTATTCCTCAACCGCCTGGCTATGAAATTCGCTACAAGGGCGAGGTCAGGAAGCCGATTATTGAGGTCAGTGGGTTACAGCTTATTATTGAGACCCTAAAACTGTCGTAATACATGGATATAGTGTTTTAATTGTCGCTCTTTCACAATATATTGGT # Right flank : CCAACTTCGACTGCGTTATCGCCCGTAGTGTGGAAGCTTGCTCCCAGCAGGCAAGGCGTTTTATGGGTTTTAGCCGTCTGCCAGATGACACACCGCTTCGATATTGTGTCCATCTGGCGCAATGACAAAGGCGGCGTAGTAATTGGCGTGGTAATTAGGCCGCAGTCCCGGCGCGCCGTTATCCTTGCCTCCGGCGGCCAGCGCCGCGTGCCAGAAGGCATCAACCTGCTCGCGGCTGTCGGCGCAAAAGGCGATATGCAGCGGCGCGGAGCTAGCCGGGGCGAACGATGCCTCTTTATGCCTCTATCAAAGCGAAGATAAACCC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCACGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 36476-34613 **** Predicted by CRISPRDetect 2.4 *** >NZ_LRCC01000125.1 Klebsiella aerogenes strain GN02761 GCID_ENTE_00228_NODE_50.ctg_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 36475 29 100.0 32 ............................. GCAACTTCTCTTTATCGACTCCGTCAGCTTAC 36414 29 100.0 32 ............................. TAATGACCTGCTGACTGCAATTGCGCTGGGCA 36353 29 100.0 32 ............................. TTGAGGCCTCACCGGGTGAAATTCAGGTATTG 36292 29 100.0 32 ............................. TGAATACTGGCGAACTGGTGCTGGTCGATACG 36231 29 100.0 32 ............................. CGCCGGGCTGATTTGCCCGGAAAGAACGGCGG 36170 29 100.0 32 ............................. TAACGGTAAATACGGCCCTGAATCCAGTGTGG 36109 29 100.0 32 ............................. TTCATTAAGCGTGTCAGCAATGACTATCTAAT 36048 29 100.0 32 ............................. GCTGTGCTGCAGGTTATTTTGTATATGTTACA 35987 29 100.0 32 ............................. TGTCGATAGCCATCAAAAGTGGTATAACCTTG 35926 29 100.0 32 ............................. GGGTATGCCCGCGCCACGGTGAGATTGTTATG 35865 29 100.0 32 ............................. CAGGTCCGTTTAAAAATCTCGACACGCGGCGC 35804 29 100.0 32 ............................. GCAACGTTAATTACGCAAAACCAGGTGTCACT 35743 29 100.0 33 ............................. CCAATAGCGCATTATTACCAGAATATCGCAAAC 35681 29 100.0 32 ............................. GCGGAGTGGCTGGAAACGGTTGTCCGGCCTGA 35620 29 100.0 32 ............................. GCCTATATGAGTGACCGCGACGGGTCTGTTCG 35559 29 100.0 32 ............................. GTTACGTAGGCGCGCTGCTCAATCAGCCTGAT 35498 29 100.0 32 ............................. GGCTTAAGAGGAAAGAGATAACGTCATATACT 35437 29 96.6 32 ............................A TACAGACGCGGCAACCAATGCGCTGACCTGGC 35376 29 100.0 32 ............................. GTGTGGTAATTATTGAGACGTGCTACGCCAAA 35315 29 100.0 32 ............................. AGTGATTCTCGTGCACTATCAAAGCGTCTGGA 35254 29 100.0 33 ............................. TTATTCAGGAATTCTATTGTGTCTTTTGCTTGC 35192 29 100.0 32 ............................. AGACAGCCAATAAATGGCTGCCGCAGCTGATG 35131 29 100.0 33 ............................. TTCGGCAACGAGCGCAACGACTATCTGATCAGC 35069 29 100.0 32 ............................. ATATGCAGGATATTAAAAATTTCAAACCGGCA 35008 29 96.6 33 ............................T GCGGTGGATAAAGCGCAGGTCGTCATGGGGGTC 34946 29 100.0 32 ............................. GCAGGAAAATCTACAGCCTTCCTACATAGGAC 34885 29 100.0 32 ............................. ACGCGCTACAACGTCCAGCACATCGCGATTGA 34824 29 100.0 32 ............................. CTCATTCAGTATCTCGGTCATTTTGTCGGCGG 34763 29 100.0 32 ............................. GGTAGGTAAAAACATGCCTCATAAATTATCGA 34702 29 100.0 32 ............................. TATTTCCCCTCGGTTGAGAAAGAAGTTAAGGA 34641 29 93.1 0 ............T.........C...... | ========== ====== ====== ====== ============================= ================================= ================== 31 29 99.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGTTGTCGGCAGGCGAAATCGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCAGCGATACCTGAGCCTGAATCAATGGGGGATAGCGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTCCCTCCTCGTCTGCGGGGGCGGCTTGCCATCTGGCTGCTGGAGGTTCGGGCGGGAGTCTACGTTGGCGATACCTCAAAGCGGATCCGGGAAATGATTTGGCAGCAGGTGATACAGCTTAGCGATTGCGGAAATGTGGTGATGGCCTGGGCAACGAACAGCGAATCTGGTTTTGAGTTTCAAACCTGGGGAGAGAACCGCCGCATGCCGGTAGATTTGGATGGCTTACGACTGGTGTCATTTCTTCCCATTGAAAATCAATGAGTTGAATGTTCTTTAATAATAATGAAATTGTTGGAATAAAGTTGGTAGATTGTTGGTGCCTTAAAAAGGCATTAAAAAACAGTAATATATGTTTAGA # Right flank : TAGATTTGTTTTAGGTGACGATTGCCACTTCTCATTCCCATTTCATTCTCGACTCTTTAGCTTTCCCCACTAACCTTTCGCTCAGAAAAATCCGGAGATGGGCACTGTCGGCCAAATTTCTCAGCCCAGGGGAATGGCGCCCCGTTTTTCACGTAAAGCTGGTACAGCCGCTTAACCGATTGTTGGTCGCTCGAGACCCAATTGCTGGCATTGCAAAGTATAGCGGCATAAGCCTGAGATTTTCGCGGTAGCAAACTGGCTGCTTTTTCAGCAAGTTTTGCCGCCCTCCAGCGATAATGCTCAACATTGTTGAATGGTTTGGGTCGTGAATGCTGTATGCGATATTGCTCCTCGCTACCAACCCAGGAGTGTACTCCAGAGATATTGTTTGTGGCGTCTGCGCAGGACAGGTACGTATTTGCGTCACTTAAATACTTTTGGTCAGGCTCCAAAAAATAGCTCATCAGGTTGTTGCCATGCTCGCGTAGAATGACCGCAGC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //