Array 1 29832-28364 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJOI01000005.1 Halomonas meridiana strain NBRC 15608 sequence005, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 29831 28 100.0 32 ............................ CGAGGCGCTGGCGAATAACGTCTACGGCGGGC 29771 28 100.0 32 ............................ TAACGGGTGCCCTGAGTGTACCAGCTACGGTT 29711 28 100.0 32 ............................ ATCATCGCCCGCGTGTCGCTGTTTGACATAAT 29651 28 100.0 32 ............................ ATAGCTGGCGGCGCAGAGCTGGCGTCAATTGG 29591 28 100.0 32 ............................ TATATCGGCATGGCCTATTGCGTACTCGCTCC 29531 28 100.0 32 ............................ TTCACCATAGTTTTCAAATAGTCCGCGCTGGG 29471 28 100.0 32 ............................ CGATATGGTGCTCACGGTTACAGTAGCCATAG 29411 28 100.0 32 ............................ TGCGTGTGCGCCGCCGTTGGCGAATCCGGGCA 29351 28 100.0 32 ............................ GTTGGCATCCAAGCAGTCTTGAATGCCCTGGG 29291 28 100.0 32 ............................ CGGCGCTGCCCCATTGCAATATGGCTGTCATA 29231 28 100.0 32 ............................ AATCAACAACGCCGCTGCATAACCCACGCATG 29171 28 100.0 32 ............................ ACCAAATGCGGGTCGCCACTCAATACCGTTAC 29111 28 100.0 32 ............................ TGCGCGCCCCTAAGGTGCAGCTAGCCGGTATG 29051 28 100.0 32 ............................ TGCCGCCCGTTTTGGTTAATGGATACGACGCG 28991 28 100.0 32 ............................ TCGACGATGCTGCCGATCTGCTTGGCCTCGAG 28931 28 100.0 32 ............................ CTTCTCTTCGCCGATGTCGGCGATCAGCCGGA 28871 28 100.0 32 ............................ GGGAGGCGGTACGGCGATTAGACGCTCTACTG 28811 28 100.0 32 ............................ ATAGCTCGTAGCGGGCATCGCTCACCACGGTA 28751 28 100.0 32 ............................ CAATGGCTGCAGGATCGCCGCCAGCAGTGCGT 28691 28 100.0 32 ............................ GTCCAGGTTGAAATAGACGTTGATACCTGCAG 28631 28 100.0 32 ............................ AAAGAGCAAAAGTCGCGCTACCTCGATGCGAT 28571 28 100.0 32 ............................ GATCCGCTGGGTAAACGCGGCCTAAAGCCTGC 28511 28 100.0 32 ............................ GCGCCCAGTCGCAGAGCTTGCAGCGGATCGCG 28451 28 100.0 32 ............................ TCAGGCTCAGCGACCGGCAGAGCTGCTTGCTC 28391 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 25 28 100.0 32 GTTAGCTGCCGCCCAGGCAGCTCAGAAA # Left flank : CGCGTCTAAAACAGCTAATGAGTGACGCATGGCTAACGGGGATGCGAGACCACGTTAGCGTAAGCGAAGTGCTGGCGGCACCCGACCATGCTAAGCAAATTAACGTGTCGAGGCGGCAGTTTAATACGGGCAGCCCCAGCCGTGCCAAACGCTATGCCAAGCGTCACAACATCACGGAAGCGGAAGCCAAACAGCTATACGCCAAAGTGGCAGACAAACGCATTGAGCTGCCCTTTGTGACGATCAATAGCCGCTCTACTCAGCAGCGCTTCAGCTTGTTTATTGAGCACAGCAAGCCTGCAGATAGCGAGGTTGGAGGAACATTCAACCATTATGGGTTAAGCCCCCAAGCGACGGTGCCGTGGTTTTGACCCTTTTTTTCATTGAAGTAATTGGCAACGAATAATCAACCACTTAGCGGTATCACTTTGAAAAGGGTGGTGCCGCTTTTTTCACTTAAAGCTCTTTAACAATCAGCACACTATATTTGATATGCTCTA # Right flank : TTGAAATATCCAAGAGTGAATGGGCTTTTCTCTTCATTGTGTCGCGCACCGTTGGGTGCGTGGCCGCGCATCAGAAATTCCGCAACTACTCCTTCTCCTCATCCTCATCCTCATCCTCATCCTCTTCCCAGCGTTCGATGGCGCGTTTGTCGTCGGGGAGTCGCACCATATCGCCCACGTTGAGATTTTGGTGTGACTGAAAGCGGTGGCCGCGTTGGTCGAGAATGGCGGCCACGCTGCCAATGCTCACGGCATCTTCTTCGCGGTAGGCTTCTACTTTGACCCGCACAATGCGGCCTTGGTAACGGGCGGAAAGCACGGCACCTGGGTAGGGGGGCGTGTGTTCGGGGTCGTCCTTGAAGAGGGCTGCTACGCTGGCGCTGCCGGGCTCGTCCCATTCAATGTGCTTGTGCATGGTGAGCGTCCTTACTATGGGTGAATAAAAATAAGAAGGCTCGTTAAGTGTAGTGTGCGTTGGCAGAACTCGGCCAATCTAATCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAGCTGCCGCCCAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTAGCTGCCGCCCAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //