Array 1 6975-7597 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAQC01000020.1 Fusobacterium sp. CM22 ctg7180000007336_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 6975 29 86.7 35 ....-T....C......A............ GAAGCAGTTTATGGAATTTTTTCTGAGATTACTTT 7039 30 100.0 36 .............................. GTACATTTGAAATGTATAAAAATACTATGCAAAGAA 7105 30 100.0 35 .............................. AAAGCAAAGATTTATATAACTCATAAAGAACACAA 7170 30 100.0 37 .............................. GTTATTGACTTCTCATTAAAAAGTCTTTTTTATTTTA 7237 30 100.0 37 .............................. TAATCCACAGAATAAATTTAAAATTGGAGGTGTTTAA 7304 30 100.0 36 .............................. AGAAACAGAGGAGGCTTTAACAGTTATGAATAAAGG 7370 30 100.0 36 .............................. AGCAACAGATGGGAAAGGTGGTTATTTAGTACCAAC 7436 30 100.0 36 .............................. AAGAGAAGCTACTGAATTAAATGGTAGTGATTGGAA 7502 30 100.0 36 .............................. TTATCTTCTAAGTAATTTCCGTTCTTATCTTTTTCG 7568 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 10 30 98.7 36 ATTTCAAAACTTTTCAAGTTTATAGTTCAT # Left flank : TTCTTCTGTTCCATGTATAGAAAATTTTCTCATACTTTCCTCCTTGTTTCAAGAATTTTTAATAGATTTTTATTTATTCTTTAATATGATTGGTTTATAAGCCAATACTTTGTCTGCTATTTCTTCTGAACTCATATCAGTCCAGTATATATAATCAGATATTTCTGGATCCAAAACTAAATTTTGTAGTTTTTCTAAAAGAATATCTTCTTCTTCCTCTGTTCCTTCAAAGTTTTTTATTTGTTCTATTAAATCTATTAATTCTTTTCTTTCCAATATATTTCACTTCCATATTATTGATATATAATATTTGACTCCAATTAGATGATTTTGGTTATTTTTTCTCTTTACAGTATTTTTTTATAAAAATAGTATATTTAAACTACTATTTTATTTTTATTTTTATTTATATTTAATTTTTTTATATTCTATATGATAGGATCACTTTTTTATTTACAAATTACTATGGATGGATAAAAGAAAAAGAAAGAAGACTTTGA # Right flank : TTATCT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTCAAAACTTTTCAAGTTTATAGTTCAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-8.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA // Array 1 17-776 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAQC01000003.1 Fusobacterium sp. CM22 ctg7180000007336_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 17 30 100.0 36 .............................. TATTTTTCTGTTTTTAATTCCTCTAATGTTCTTCCT 83 30 100.0 37 .............................. TAAATAAAAGAAATGGAGTAATTGAATCAGTAGTTGA 150 30 100.0 36 .............................. TGTAGTTCTGAAATTAAGTAGTCTTCTACATAAATT 216 30 100.0 37 .............................. TTTTGAGTATGTAATTTTTTATACCCTCAGTGGTAAA 283 30 100.0 36 .............................. GTTTGGAGGTGATGAAAATCCTTATACACAACTACT 349 30 100.0 38 .............................. ATGGTAAAGGCTAATGCTGGAGTAGTTAGAAGTTTACC 417 30 100.0 36 .............................. ATAAATGGAAAAGAAAATAATTAAAGTTAATAATTA 483 30 100.0 37 .............................. TGTGACATTGAATACATCTACAATTACAACAGTAGCA 550 30 100.0 36 .............................. AAAACATTTTAATTGTTGTAAATGCGGTTCAGAATT 616 30 100.0 35 .............................. ATGGGCTTAGATGACCCTGAAAAATTAAAGTCCAT 681 30 100.0 36 .............................. TATTTTTCTGTTTTTAATTCCTCTAATGTTCTTCCT 747 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 12 30 100.0 36 ATTTCAAAACTTTTCAAGTTTATAGTTCAT # Left flank : AATTACAACAGTAGCAA # Right flank : TAAATATATTTCTTTAATTGTTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTCAAAACTTTTCAAGTTTATAGTTCAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [18.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 1 58-2337 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAQC01000015.1 Fusobacterium sp. CM22 ctg7180000007337, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 58 30 100.0 36 .............................. ACTTGAAGCAGGTTCAATTAATACAAGTTAGACCAC 124 30 100.0 37 .............................. GAATTATATAGAACTTACAAAGATAGTTTTAAGTGCT 191 30 100.0 36 .............................. GGAAGATGTAAGATAATGGGACAGATGTTTATGTTA 257 30 100.0 36 .............................. GAAGTAACCAAAAATAAAAATAAAGAGTGTACAGGA 323 30 100.0 37 .............................. CTATCAGATAGCCAAATTTAAAGTTTTAAAAGAAAAG 390 30 100.0 36 .............................. AAAATGTAGAAAATAGAAATCTAACAGATATAAATG 456 30 100.0 36 .............................. AATATTTTTGCATTGTCTATCCATATTCTAACTTTT 522 30 100.0 37 .............................. TTTTAAAGGGGGATGTAAAGCTAATAAATTCTACACT 589 30 100.0 35 .............................. TAGAACTTACATAATTTTTTATAGTATTTAATACA 654 30 100.0 37 .............................. TAAATATGGAAAACATGGAAAACTTTGGTGGGATAAT 721 30 100.0 36 .............................. TGATAAAAATAATTTAAATTATAAATTCTATTTTAA 787 30 100.0 37 .............................. TATATAAAATAAATATTTATCATATATTCTTTATATT 854 30 100.0 35 .............................. AATCTAAAATACATTTAATATTAAATTTATAGACT 919 30 100.0 37 .............................. GTATGGAAAAGAGGGCTTTAATGTTCATTACCCAGCA 986 30 100.0 36 .............................. AAAAGTATCACTGTATGGCAGGAGTAAGTCAAGGTT 1052 30 100.0 36 .............................. TCTTTTTTCAATGTCCTAGCTAGCTATTTTCTAGCT 1118 30 100.0 37 .............................. AAAACAAAGGATATAGATTAATATATACTTTAAAAGA 1185 30 100.0 36 .............................. TGAAATATAACACTTGTACCTGTTGCAATTACATAT 1251 30 100.0 35 .............................. TGTTTTGAAGATATTGTAAATATATTTTACAGTAT 1316 30 100.0 37 .............................. AAGTTAAGGCTTTAACAGGAGCTACTGCTGAAGAATA 1383 30 100.0 36 .............................. AATCATATCCACATTATCAATAGATTTTAATTTCTC 1449 30 100.0 36 .............................. ATTATCAAAAGGCTTATATAAAGCATTAGATAAAAT 1515 30 100.0 36 .............................. ATAAAAGTTTAAAAGACTTAAAGCTTCTACATACTT 1581 30 100.0 36 .............................. TAAAAATAAATCCACATATGTATCAACTTCATAACT 1647 30 100.0 36 .............................. CATCTCTATGAATATTTTAAAAGATAGAAATAAAAT 1713 30 100.0 37 .............................. ATTACGATTATAGTAGGACTACAGGTAAATATAGAAA 1780 30 100.0 35 .............................. ATATCTAATTAACTATTTATCTATAAATTTAAACT 1845 30 100.0 38 .............................. TATTTGTCCTTCCAATAGTCTACTCTTTAACTTAAATA 1913 30 100.0 35 .............................. ACAAAATAGAAAATATATGTTAATATTAATTATAA 1978 30 100.0 37 .............................. TAGCATCTTTTTAAATTTATGTCAATCTTTTTTTTTT 2045 30 100.0 35 .............................. ATTAATAAGTAGTCTTTTTTGATATTGCTGGGAAC 2110 30 100.0 36 .............................. AATAATTTAAAAAATGTATTGACATTTTATAGAAAA 2176 30 100.0 36 .............................. TTTGTCATTTTTTTTACTCTCCTTTTAAATAAATTT 2242 30 100.0 36 .............................. AGTCTTAATTGACTTATTAAATAAATTAGAAAAATG 2308 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 35 30 100.0 36 ATTTCAAAACTTTTCAAGTTTATAGTTCAT # Left flank : TTTTCAAGTTTATAGTTCATGAATTATATAGAACTTACAAAGATAGTTTTAAGTGCTA # Right flank : TAGCTATTTTTTCAAGCTTTATGGATTTATAATACCTTATTTTTCTCAATATTACAAGTATTTTTTATGTATTTTTCCCAAGCAATTCTACTTTTTATTTAATTTTTCTAAAACATTCATATTTTGGAAAGTTTAAATAGTTTTTTAGAATATTGCTTGGGAAATTTTCTTTTTTATAAAAATATATTTTCTTCATTTGGAGTTGGATTTCCCAGAGTTTCTTCTCCAAAAACATCAGGACTTATTGATTTTAAAATACAGACAAAATCTTCTTTTTCAACTATTATGTTTTTCAATTCACTTCTTAAACTAATTAATTTAGATGGAGTTATATCTCCACGAAAAACAGATTTTTGAAAATGAGATAAATATTTTTTGCATATTTTAAAAACTTTATTTACTCTTTTTTCTGAAACATCGTAAAATACCCAAGCATAATTATAGTTTATATTTTTCAATTTTTCTCATCTCCTAAACTAATATGAATTTTTTAAAGAAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTCAAAACTTTTCAAGTTTATAGTTCAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 68353-68617 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAQC01000007.1 Fusobacterium sp. CM22 ctg7180000007391, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 68353 36 100.0 40 .................................... TTATACTCACTATATCTGTCTTTTCCAGTATAAAGATGTA 68429 36 100.0 39 .................................... TCTTGGTGGACTAGGTGGAGCTAATATTTCAGCAGATAA 68504 36 100.0 42 .................................... CGTTATTAATTTACCTGTCATTTATATTTACCTCCTAATTAT 68582 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================== ================== 4 36 100.0 41 GTATTGAAGGTAATCCATTTATAATAAGGTTTAAAA # Left flank : TACTAATAAAAAAAGTATTCTTTTTTCTCCCAATAGCTGTCCCTTGAGTTGAAATGTATAGATCCATAGATATTTCCCATTAAAAAATTTTTTAAATGAAAAATGTAATAAATATGGTTAAAATAGTTTAAAATAATAAAAAAATAATTATATATTATATATTAACATATATATTAAAAATAAAATAGAAAAACTTTAATAAAATAAATATTCTTTTAGAAAAAAATGTTTACAAATTTATAAATATGTAGTATAATATAATAAATATAAAAACATTAGTGTAGAAAAAAGAGTATAAGGTCAATTTTTTAACATTTTATTTTTTTGTTTGTATTAAAAATTAAAATGCTCACTATTTTAAAAAGTTAAGAAAAAACAATAATAAATTTTTAGTACAAAACAGTTAAAATCCTCAAAATACGGAAAAATGTTCAATTTTTGCTACCATATAAAAAAGACTTCTTTCTACCATAAATACACCATCTATCCCTTTGGTAAGG # Right flank : CATATAATATTTTCATTTCCCTCAAAGTATATAAGCTCATGGTATTGAAGGATCCATTTATTAAAACTTAGTATTTCTTCAATTCTACGT # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTGAAGGTAATCCATTTATAATAAGGTTTAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 4241-4013 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAQC01000063.1 Fusobacterium sp. CM22 ctg7180000007323, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 4240 30 100.0 37 .............................. TATGAATGTAAAAAAAGCACCTGTATTCGTTGGAGAT 4173 30 100.0 37 .............................. GGATTGGTTATCTAAAGCTGCAAAAGAAGAATTTGAC 4106 30 100.0 35 .............................. AAATGGATTGTTTAATTCAATTATTAATTCATCTA 4041 29 90.0 0 ........................AA-... | ========== ====== ====== ====== ============================== ===================================== ================== 4 30 97.5 37 AATTTATGTATTTCTATATTAGAATTTAAA # Left flank : AATTCAATTATTAATTCATCT # Right flank : TACAGAAGAAAGGGATTGAAAAATAAAGACTTAATGCTGTTATATAACAAAAGAATAAATAAAAAGTTAAAAGGATTAACTCTAGTTTTTTATATAAGTTAATCCTTTTTAATAAGTTAAATTAAATTTATTCAATTTTTTAAGGGGGAGTACATTTTTTATTGTGTTAAGTATAGCTTCATAAAGTAAACTAAGAATTAAGTATTCATAAAGTAATAGAAAAATTAAAAAAACGAAATTCAACTAAAATATTAATATAATGAACACAAAAATTTAAGATAGAAAATAAAAATTATCAATTATTAAATTAATAAAATTTTATTAAAAATTAAGTGAATTTCACAATAAAAATATTGCATTTAATCGTAATTGGTGTTAATATATACTTAATAAATTTGAAAGATAAATTTAAAGTTTTATCTACTAAAAATAGGGAGTGATTATAATGAGTTTTTTAGGGCAAGTTAGAAAAAAAGCCTTACAAGCAAACAGAAGAATAG # Questionable array : NO Score: 5.74 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATTTATGTATTTCTATATTAGAATTTAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:90.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.10,-1.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 12117-11773 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAQC01000064.1 Fusobacterium sp. CM22 ctg7180000007370, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 12116 37 100.0 42 ..................................... GTAATATATATAAAGCAACCAGATAGTATGGGAGGAGACCTT 12037 37 100.0 39 ..................................... TCACACCAATTTCTTATCCCCCCGAAAAAAACAGCTTTA 11961 37 100.0 37 ..................................... GGACTTGATACAAAACTTATGAAACTTGCATATCTTA 11887 37 100.0 41 ..................................... TACAAATGGTTTATCTATAGATTTAACAGCATTAAGCATAG 11809 37 97.3 0 ....................................G | ========== ====== ====== ====== ===================================== ========================================== ================== 5 37 99.5 40 GTATTGAAGGTAATCCATTTATAATAAGGTTTAAAAC # Left flank : TGAAAGTTATGATGCTTGGATAGAAACAATAAGAAAACAAATAAAGAAATCTGAAAGCACTATAACAAATATAGAGTTTAAAAAGGTTGAACTAGAAGCAATACAAAAATATATAGCATAATAAAAATTAAATATCAGCTGATATAAAGAAAATGGAGTTTAGCGACTCCATTTTTTTATAAAAAAATATATTGAAATTTAATATAAAATTATGTATAATAAGTTATAGTTTACAAGTTAATAAAAATGTTGTAAAATATAAAAACAAGAAAAAAATTATGTAGAAAAAAGGTTATAAGGTCAATTTTTTAACATTTTATATTTAGATTTATATTAAAGAATAAGATGCTCACTATTTTAAAAAAAAGTAAAAAATCTGTAATAAAAATTTAATATAAAAGGTTAAGAATCCGTGAATTACGGAAAAATGTTCAAATTTTGCCACCATATAAAAAAAACCTCTTTCTAACATAAATACGACATTCATCCCTTTGGTAAGG # Right flank : TAAAATAGCTATTAAAAATATAATAAAATTTCTACATATTTTTATTAAAAGATTAAAATTTCATCATTTTTAAATTTTTTAAGTTCTAAACTTAGCAATTATTCGAAGTCAGTTTATAATGAATTTTTTTAATAAAAAAAATCTATTTAAAAAATAGATATCTAAACACAAAAAATGGAGTTCGTTATTAAACAAACTCCATTTATATATTCTACATATTATTTTTAGAATTTGGATACTATAAAAATTCTACTAATATTATATATAATATTTATTATTTTTTTAACCTAAAAATTATTTGTACAAGAACTATTATTACTAAAAATTTTATTATAGTTAAAAGCATAATATAATCCTCCTTTGAAAAAAAATAAAAACTATAAATTGACAATAATTACTTTAAGTGTTGCAGTTATAAAATCTTTTAGTATATCCATGTTATCAACTCCTTTTCACTAAAATTTTTAAAGATAAAACTATTTTTTTAAAAGCCAGTACCA # Questionable array : NO Score: 3.03 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTGAAGGTAATCCATTTATAATAAGGTTTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.68%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [91.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 7584-8601 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAQC01000071.1 Fusobacterium sp. CM22 ctg7180000007356, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 7584 37 97.3 37 A.................................... AATCTGAAGTAAAGAAATACACAGCTTCTGTACATAA 7658 37 100.0 37 ..................................... ATGGGCACAATTAAGCCCAGACACATATCATGGTGTA 7732 37 100.0 39 ..................................... AGAGGAGAAAAGAAATGAAAAAGATTATTATTGTATTAA 7808 37 100.0 40 ..................................... AGCAAGTTGGGATAATACAGAAAAAGTAGGTTATATAGAT 7885 37 100.0 36 ..................................... CTGAGCAAAAAGTTGAAACTACTAAAGCAGAAGTAG 7958 37 100.0 36 ..................................... TAATTAACAAAATCTCCTAATGGTGTATTTTGTGGA 8031 37 100.0 38 ..................................... TAAAAGACTTGAAAAGAATGCATTATGGAAAGATTTAG 8106 37 100.0 42 ..................................... TAAAGAAATATTGATATTAGTTTGCTGGGTGATAGCAATAAA 8185 37 100.0 42 ..................................... TAAAGAAATATTGATATTAGTTTGCTGGGTGATAGCAATAAA 8264 37 100.0 43 ..................................... TATGGAATAGCTGAGTTGAACCAATATGTCCAATATATGTTTT 8344 37 100.0 37 ..................................... TCATAAAACTTATCTCCGTCAAACTCATGTCCTGATA 8418 37 100.0 38 ..................................... TTCCAGTTTTTAAAGCACTATCTATATTAGAAGTTATA 8493 37 100.0 35 ..................................... TCAATATTATAATACAGAAGATGTAGCAGAAGTTA 8565 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== =========================================== ================== 14 37 99.8 39 GTTTTAAACCTTGTTATAAATGGATGACCTTCAATAC # Left flank : TAACTTTTTCAGTAATCTTATAAAGAATTTTACCAAATCTCTTTTTTGTAATTCCTATTTCATCATTAGCTTGATGTGTTTTCTCTAAATTATTTTTATCATAGACATAATATGAATATATACTATTATCAATACGTGAATCAAAGTAACTTTCACCTAAGTAATGCAAGTTTATTAACTCTTTCTTTGTTAAATTTTTTTCTTCTAATACTAAATTAATTTCTTTTAAAAATTTCTTTAATTCCACTATATATTCATCTGAATCTTTTCTCATATCTTTATATCTTTCAATTACATCTATTAGCTCCTTTACAGAATCTTTAAGTTCAATAAAATCTTCTTCTACAAAATAATTCTTTTTTCCAAAATTACTGAACAACATAGTTATTCTCCCTCTGTTACCTTTTTTCTATTGTATTGTATTTTTTATTTTAAATCAATTATTTTTACATAATAAAAAATGGAATCCTTGGATTCCATCTTCCATGATATTTAATTTT # Right flank : TCAATATTATAGATAGCAATAAAGTTTTA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAAACCTTGTTATAAATGGATGACCTTCAATAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA // Array 1 47030-46693 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAQC01000087.1 Fusobacterium sp. CM22 ctg7180000007313, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 47029 37 100.0 40 ..................................... TCCGAAAGTTTCCATTTCGTACGCTTCTGGTACAAAATTT 46952 37 100.0 36 ..................................... TATTGCAATTGCTTCTGTTGTTTCACCCCAAGCTAA 46879 37 100.0 39 ..................................... TTAAGCTCCAATTCAGATAACCTGTTGTTAATCTTTGAT 46803 37 100.0 37 ..................................... ACGCTTATCATAAAGTGATACATCTCTTATACCTACT 46729 37 97.3 0 ....................................T | ========== ====== ====== ====== ===================================== ======================================== ================== 5 37 99.5 38 GTATTGAAGGTAATCCATTTATAATAAGGTTTAAAAC # Left flank : TGTTTCACCCCAAGCT # Right flank : TTTTGAACTCCTATTATTGTATTAAAATTAATACAAATAAGAGTTTTTTTATGGTTGTTTTATTGCAAAGAATATATAAATTGTTATATAATGAGATATATAATTATTGGAGGTGGAGAGAAATGATTTCATTTGGTAAAAATATTCAAAATAGAAGAGTTGCACTAGGTTTAGATGTAAGTGAATTAGCACAACTTGCAAACTATGCTAATAAAAGTTATATAGAAAGAATAGAAGATGAGAAAATGTACCCATCTGCTAAAAAACTTCCAGATTTAGCAAAAGCTTTGTCTTGGAAAATTGATGATTTATTTAAAAATGTTGAGCTTGAAGAAATTGAAACAGAGTATAGTTTAATACAAAATGCAATAAGATTTATTAAATCAATGGATAAAAAAGAAGTATCTTTAAAAACAGTTACTCTTTCAATAGATACATATAAAAAATATTATGCTTGTTTATTTGATAAATATATTAGAGAAAATTTTTTAAATAAGGTT # Questionable array : NO Score: 3.03 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTGAAGGTAATCCATTTATAATAAGGTTTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.68%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-13.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 37242-36030 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAQC01000066.1 Fusobacterium sp. CM22 ctg7180000007334, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================================================================================== ================== 37241 30 100.0 36 .............................. ATAATATCTATAACTTGAATAAATTGATTTATATTA 37175 30 100.0 35 .............................. ATTTAAGACTACTTAAATTAATAAGTAGTCTTTTT 37110 30 100.0 35 .............................. TTTAGTAGTCCTCCTTTTGTTACTCTAACAGATAA 37045 30 100.0 35 .............................. TTATAATCACTTGTACCGAATATATTTTCTATTTC 36980 30 100.0 35 .............................. TAGTTTCGACCTCCTAAATTTTAGATGTCTTAAAC 36915 30 100.0 35 .............................. AATTATACCTAATTCTTTAAAGTTTATATTCATTT 36850 30 100.0 35 .............................. AATTTAAAGCATTTTAAGGCTATAATTTAGAGTTT 36785 30 100.0 36 .............................. ATATTACATATATAGGTAATTGAGGGGAAAAAGTGG 36719 30 100.0 35 .............................. TTTTGCCAAAGCTTTAGAAATAGAACCTGAGATAT 36654 30 100.0 37 .............................. GTATTTAATTTCATCTCTACTCCTTGTAGAGATTGTT 36587 30 100.0 102 .............................. GTTGGAACAATATATAATTATTGTAGAATTGGAACTATTGATGAATAAAATTAAAAATTTAGTTCTAAAAGAACAATATATAATTATTGTAGAATTGGAACT 36455 30 100.0 36 .............................. TTAATTATTTGAACAGGATCACCTAATGTAATATCA 36389 30 100.0 36 .............................. TGTAAAATGAAAAAAATCATCATCATAATAATTTAC 36323 30 100.0 36 .............................. AAGGAAAAGTTTATAACATTAAATACAAGAGCAGTT 36257 30 100.0 37 .............................. GATAAAGCTAAAGATGAGGCAATTAAAGATGTAAAAA 36190 30 100.0 35 .............................. AATATTGCTCTATCCCTTTTATTAGTAAAAACCTT 36125 30 100.0 36 .............................. TATAAGTATTTCCAAGTTATTGGAATTAATTGTTCA 36059 30 93.3 0 .........................A...G | ========== ====== ====== ====== ============================== ====================================================================================================== ================== 18 30 99.6 40 ATGAACCTTAAACATGAAATGTTTTGAAAT # Left flank : TAAAATTAATTTATTATAGAACTTTCCTTTTATTATTAATGTACAATAAGTTCAACATTAGATAATATCCACACTTTGACTAATTAAGGTCAATTATAAAGTTAAATGTATGATATAGTATTTTATAAGTTTATATTGATTTGATCAAAGGATATCTTAAATACTCAAGGGGCTGTTACAAGCTGATGATAAAAATCATCAATTTGCAACAGCCCAAAGCCCCAAAGAACTTGGTAAATATATGTGGCTAATAAAAGTACATATTTCCCAAGAAGCTCCCACTTCTACAAGTGGGAGTAGTTCACTTTATAGTAAATATAAAAAAATTAAAATAATAATTTTACCAGGTGATATTGTAAATAAAAGTTTTAAACTAAGAAAATATGGACATTTAAAAAAATTGAAAGAAAAAATGAATTTACTTGGTAAAAATATATAAAAAACTTGTAATATTGGAAAAAATAAGGTATTATTAATTCATAAAGCTTGAAATTATAGCT # Right flank : TTAATATCTTTATTACTCTCTGCATAAGTTTTCCACATGAACCTTAGGAATATTATGGGGTTATCATAAAATAATGTAAGGTAGAATAGATCAAAAAGTTGATAAGGAAACCTATAATAAAGATATGAAGTACCTAGAAAAAAGAAGTGATGAGAGAGACAATGAAATCAAAGATTTGATTAAAGACTTAAAAGTTGATATGAAAGATAGATTAGATTATATCAAAATGGATATTAATTATCTTAGAAATAGAGATTGTAAGGGAAATAAAAAAGAATAAGATATAAAAAAAGTTCAGTAAAATAATTAGCTGAACTTTTATTATAATAATTTTTGTTATCTAACACCAGTTATTTAATAATATTTTAAAATAATGATTTTTAATAAATAACAAATAAGTAACAAAAAAAGTATCAGAATACAAAAAAGCCCTCAACTTTTTTCAAGTTCGGGCTTTTTTGTAGAAATTAAACTATAATTAAGGAAACGATACAAGATAA # Questionable array : NO Score: 2.90 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:-0.33, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGAACCTTAAACATGAAATGTTTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.80,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA //