Array 1 12228-14161 **** Predicted by CRISPRDetect 2.4 *** >NZ_NIVQ01000043.1 Vibrio salilacus strain DSG-S6 NODE_43_length_14234_cov_1432.54, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 12228 32 100.0 33 ................................ CAGATTGGCTTGATATCATTGGCCATGGCTTCA 12293 32 100.0 33 ................................ GTTTGCATACATAAAAACACCTCCTTTTTCTTC 12358 32 100.0 33 ................................ TCGTTATTAATCAAGAGTCAAGCTCAGTAACTG 12423 32 100.0 34 ................................ AAGCAGATAGCCGTGAGAGCGCAGAACGGAATCA 12489 32 100.0 33 ................................ GTAGACAACTACGCAAGAAATACGCTTACATTG 12554 32 100.0 34 ................................ AGGTAATGCAAAAAGGTGGAAGCCGTTAAGAGCA 12620 32 100.0 34 ................................ GATTTATCGAATGTACAAGATGCGTAAAATCGAA 12686 32 100.0 34 ................................ TCGACAATCGAAGATTATATGACAGATTGGCGAG 12752 32 100.0 34 ................................ CTGATAAACCAAGTCTCAATGATTTACTAGCCAT 12818 32 100.0 34 ................................ CACTCCCGAAGCTACACGTTGGCATTGTTAAGTA 12884 32 100.0 33 ................................ CAGCTTCAGCCGCGGTAACATCAAATGCGATAG 12949 32 100.0 33 ................................ ACGCAGTCGGATATAGCAAAGCTCCTTGGCATC 13014 32 100.0 35 ................................ CAGCTGAGGATGGAGATTTTTACATCCGAGAGGCT 13081 32 100.0 33 ................................ TTGGTGGTCGTTTGTTTTGCCGAAGTGTCAACA 13146 32 100.0 33 ................................ GCTATACCAAAACTGAGTCGGCACCAGCACCTT 13211 32 100.0 33 ................................ GATAGCAGTGCACGCTCGATCATCGGCTGCGAG 13276 32 100.0 34 ................................ GCGACAGGGTTGTCCAGCACGCAATCAATAATGT 13342 32 100.0 33 ................................ GATACAGCGGTTCGCTACGCAAAGCTTGACGCT 13407 32 100.0 34 ................................ CGGCCTATACGGGGAGCAACCCATCATCTGCTGC 13473 32 100.0 34 ................................ AAGACGTCAAGAACCCACTAGAAGCGGTTCCCAC 13539 32 100.0 34 ................................ TCGTCTCTAGTGAAGTTACGGACGGTGGCAACAC 13605 32 100.0 33 ................................ TCGCACTCGTGGAGCTGATGGCGATCCGGTTGA 13670 32 100.0 33 ................................ TGGTGATGGCGGTTCCGGTCTTCCTGATGGTTT 13735 32 100.0 34 ................................ CATTTTTAAATCATCTTTTGCGCAAACGACTTAT 13801 32 100.0 33 ................................ TTTACCTTTATTTGTCTAAAGGTTTAATATCAA 13866 32 100.0 34 ................................ AGTTGCTAAAGACTATCCAAACAAGGCGATTGAG 13932 32 100.0 34 ................................ ACGAAAAACATGGTTTTTTGTCATTTTGTAGTAT 13998 32 100.0 33 ................................ CAAGAAATCAGGGAAAAACTCATTATCAGTGTA 14063 32 100.0 35 ................................ TTTGATATGCAAGAGACGGTCATTAAGGGCTTGAA 14130 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 30 32 100.0 34 GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Left flank : ATTTGTGATCAAAAAATAAGGAGAGTGCGCAATGATGGTATTGGTCACCTACGATGTATCCTTTGCCAGTGATGATGGGAAAAAACGCCTTCGGCAATTAGCAAAAGTATGCTTAGACTATGGTATGAGAGTGCAATATTCAGTGTTCGAATGTGAAATAGATGCTACACAATGGTTACGCTTTAAAAATAAGCTATTGTCAATATACGACCCTGAAGTAGACAGTTTGCGTTTTTATAAGCTTGGCAAAAACTGGCAAAGCAAAGTAGAGCACCATGGCGCGAAAGAAGCCATAGATATATTCAGAGATCCCCTTATTTTATAATCGCTAGGTTTTAGTGCTCAGTAAAACACTGGGGATCTAGCGATTGCATAAGTTCTTTAAAAATATAGCAAATATCTATTTTTATAAATTCACTTAAAATAGTTTTCTTCTACCGCGTAAAGTTAGCGGCAAACCATAAAATATGCTAGTTTATACGTGCCTTTCACAATAGGCT # Right flank : AAGACTCTTTTGATCGACTGTCAACGATCACCGAAAACTGATCCACTTTTAGCTTAAAAACGATCAATCAAAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA // Array 1 75-435 **** Predicted by CRISPRDetect 2.4 *** >NZ_NIVQ01000023.1 Vibrio salilacus strain DSG-S6 NODE_23_length_40814_cov_1526.66, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 75 32 100.0 33 ................................ AAACCAGTAAGTGTGATGAATAGCGATATTCTG 140 32 100.0 34 ................................ GAGCTATAAACCTATGCACTTGCATTGAGAAAAT 206 32 100.0 35 ................................ CATTTTGGCACGACATCTGCCACCGCACGCTAAAC 273 31 96.9 34 .........-...................... AAGTATAAATTCGTCTTCCACATCATCGCCGTAC 338 32 100.0 34 ................................ CAGTAGCCCTCATCGTTATCAACACGCACAATAT 404 32 96.9 0 ............A................... | ========== ====== ====== ====== ================================ =================================== ================== 6 32 99.0 34 GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Left flank : AAGTGGATCAGTTTTCGATGATCGTTAGTGGATCAGTTTTGCATGATCGGTGACAGACTAACCAAACAGGTGACG # Right flank : CATTTGATCCAATGAGACCGAGTATATTGGCGGCGTCGCTGCATCTTTAATTTGCTGTTCACTGCCGCACAGGCAGCTTAGAAAACGTATGTAGCCAGAGACTGAGCCACGCGCAGTTTACTGCGTACAGTGTTGCGCCTCCCGTATCTGAGATTCAACTGCACTTATTAGAAGTTAAAAGCCCAGTCCTGGATGATATTAAAAAGTCAGACTTCTTTGAGCACTTCAAAGGCAAGGTATATATCAGCCAGTATGAAGCAATGGCTGATTTGGATAGTTCGATTTTTAATCGCTGATTTATTGCTACGCTATAAAGAGGATGAATAAAAATAAGTGATTGTACCACTTAGTAACTTGTGTATTTATAAAGGACCTATTTATGCCAATTACACGTAGAACATTATTAAAGTCCGGCCTTGCTATTGGTGCTGTAGGCGCTGTTGGTGTCGGATATACTGAAGTTAGTAAAATTGATACCAAAGCTAAAATTGTTATTGTTG # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //