Array 1 6280-4202 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADRGL010000074.1 Fusobacterium sp. DD29 JD41_73, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 6279 36 100.0 30 .................................... AATTTCAGCAATCGTAAACAGGAGAATATG 6213 36 100.0 30 .................................... GTGCAGCTGATATTCTTGCAGCACTATCCA 6147 36 100.0 30 .................................... TCTTCCCATGCCTAGGTGGCATATTTATAA 6081 36 100.0 29 .................................... ATTTTTAAATATTGTATTGTCTTTTATAA 6016 36 100.0 30 .................................... ATGGGACTAGAAGGGCTATTTGATAAGGTT 5950 36 100.0 30 .................................... CTTAGGAATAGCGGAGACAGAAGAAGAGAT 5884 36 100.0 30 .................................... TTACAAGAAAAGAAATTGATAGTTAAGGTT 5818 36 100.0 30 .................................... TGCAAGAGATAAGACCTAATCATTATAAGT 5752 36 100.0 30 .................................... TGGTATCAAAGGGTTGTTGTAAACGGAGAG 5686 36 100.0 30 .................................... GATGTTACAACTAGAAACCCTATGAAAGGC 5620 36 100.0 29 .................................... TATAGATGATATTCCAAAAGTAAATAAAG 5555 36 100.0 29 .................................... TAAAAAAAGAAAGTCTTTCGTCTGCCGTT 5490 36 100.0 30 .................................... ATTTGCATCCAAATATGAAAAGAGTTCGTT 5424 36 100.0 30 .................................... TGGTAAATATAAAGGAAGAAAACCTATTAC 5358 36 100.0 30 .................................... ATTGAACAATATTTTGAGATTAAATTCAAT 5292 36 100.0 30 .................................... TGACACTGGGATAGAATTCCCACAGATGTA 5226 36 100.0 30 .................................... TTTTGCCCAAATAAACTACTATTATCACCA 5160 36 100.0 30 .................................... AAGAAGCTCTCTAAAAACCACATATCAAAT 5094 36 100.0 30 .................................... GCAAAAGTTGTTTTTCCTGTCGAAGTACCT 5028 36 100.0 30 .................................... AAAGGTGATAAAGTTTCCATAGCTTCAGCA 4962 36 100.0 29 .................................... TAAATTAACTTCTTTAAACTGTTCTTCCC 4897 36 100.0 30 .................................... AAACTAGTTAGATTATCAATAGAAAGTTAT 4831 36 100.0 30 .................................... AACATTCCTTGGCTCTAAGTTTGTTGGTAG 4765 36 100.0 30 .................................... GGCTTCTTGAATTATGGCAACAATCAGCTA 4699 36 100.0 30 .................................... GTTGTAATCTTAATTGACTTATTACCAACT 4633 36 100.0 30 .................................... CGTTCCTAGGTATTATGGAATATGAGAGAA 4567 36 100.0 30 .................................... AACTCAACTGATATTCATCCACATGTTTAT 4501 36 100.0 30 .................................... GTAATGCATCTGGATTACGAGGGCTAATAG 4435 36 100.0 30 .................................... TTGCTTCAGGGCTCACTATTACATCCTCTA 4369 36 100.0 30 .................................... GAAGATGGAACAAATGAACTTGTCGGAGTT 4303 36 100.0 30 .................................... TAATAATTTTATGCAACTATATAACCACCT 4237 36 94.4 0 ...............G..................C. | ========== ====== ====== ====== ==================================== ============================== ================== 32 36 99.8 30 GTTTTAGTACCTTGTAATATTTGAGTATGGTAAAAC # Left flank : TTGTATTTCCAGAAAATAAAATTGCTTTAAAGGATATGCCAAAATTGCGAAATTTTTTGTTTGAATTGTCTAAAGAGAATAAAGTAATAGTGGCAACTTTTTCTAAATATCTTTTTGATTTTTCAACTTTGGATAATATTAATATTTATATTAATTCAAAATTAGCAAATTCTTTTACAGAAGATGAGATAATAAACGAAATTTATGAAAATTATCCGGTATTGAAGTCAAAAAATGAAATAAATGCTCTTCTATCTTTTGTATTAAAAAATTATTTATCTGATGTTTTACTTGGAAACATAATTACTAATAAATTTTTCTGTGAATTAGATAATGTTTTTATTGAAAATTATGAATTTATCTTCTTGCTCCTTTATTATTTAAAAAAGATAAGATTGAGTTATAAACTTAACTTGAACTATGATCCGACCTCTCCATTTTCGAACTATATAGAAGAAAAACTTTTAACATAATGTGATATATGTTAGAATAGATTTGAG # Right flank : CAAGGAAAAAAGGTTCAGAACTAAGCGTCTGAACCTTTTGTTATTTTTCAACTATTAAAGAATAATCTTCTGGAGTATCTATATCTAAGAACTCCTGAGAATATGGAAAATCAACAAGAGAAACAAGTGGAGTATTTCTAATTATATTTTTTCCACCATGGTCACCTTGAAGAGCAAGAAGCTCTTCTTTTTTACTATATGGAAAGAATACAGGTGAATATCTATCTCCATTACTTGTTGGAACAGTTATATATCCATATTTTTCAAAGTTATAATAGAGTTTTGAAATAGTATCTGGTGTCAAAAAGACCTGGTCACCAGTAAAAAATACAAAACCTTTTCCTGAAGAGTTTTGAACTCCTAATTTAATACTTTCACTCTGTCCTAAATTTGCTTTGGTGTTGTGAAGATACTTACAATTATATTTTTTACAAATATTTTCAGTCCAGCTGTCCCTTCCACATACCAGTATTTCAAAAAAGTTGGCGAAATTAAGTTTA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACCTTGTAATATTTGAGTATGGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 20784-22517 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADRGL010000014.1 Fusobacterium sp. DD29 JD41_13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 20784 30 100.0 36 .............................. ACTGGTTCTCCATTTACAAAAGCAGGACCTTTAAAC 20850 30 100.0 35 .............................. TCACAAGGAACTTTACACCAAAATTCAAGGTTTTT 20915 30 100.0 35 .............................. TATGAACTTGAATTAGTTAAAAATGTTTCAGCTGG 20980 30 100.0 36 .............................. TGCCAGAATTTAGGCTTATTGAGCACGAAAAAACGG 21046 30 100.0 36 .............................. TCTTTTCCAAACTTTTCTTCTGTTATTTTTTCAAGC 21112 30 100.0 35 .............................. TGGCAGTTAATATCTTTTAAATCCTTATTATAAAA 21177 30 100.0 36 .............................. TCACTTCCAAGCCAAACTGCACCAAATGAACCTCTT 21243 30 100.0 37 .............................. AAGGATTGATTATGACTTAGATGATGATTTGCTTGAG 21310 30 100.0 36 .............................. TCATCCGAATTAGTCATCTCATCTGTCCACCCCATC 21376 30 100.0 35 .............................. CAAAAATACAGAAGTCTTTACAATACTGATGGAAT 21441 30 100.0 35 .............................. GGGCCGTTGTTTATTATTTTATCCCCATCAATCCA 21506 30 100.0 36 .............................. TCACTTCCAAGCCAAACTGCACCAAATGAACCTCTT 21572 30 100.0 36 .............................. TTTTTTAATTCATCCTTTTTATAATTTTGGAATTTT 21638 30 100.0 36 .............................. AATCTACAAAACATATAGATTTATTGAAAGTTATTG 21704 30 100.0 36 .............................. AATTAAAGTTTATAAATAATTTCAAAACTAAACAGA 21770 30 100.0 37 .............................. AGTTATACTTCCAACGTGTTGAAGAGAGCAAAAAAAA 21837 30 100.0 36 .............................. TATTCTATTGATTTAGGGGAAAGAAAAAACCCCTCT 21903 30 100.0 35 .............................. GTGAAACGGATCACTCCTGGGGGTATTCAAAAAAA 21968 30 96.7 34 .A............................ TAAGTGAAAACGCCCCCCTTTACAAAGTGTTTAC 22032 30 100.0 35 .............................. AACTCCATAGGTATTATAACATACCTCAAAAACCT 22097 30 100.0 37 .............................. GCTATTACTCCTCTTTCTCTAATATTCCCTATATCAA 22164 30 100.0 35 .............................. TATTGTTATAATAGCTTTTGTAAGTTGTGTTTAAA 22229 30 100.0 35 .............................. CTTAAAGCAGATTTTAAACCAACAGAAAAAGAAGT 22294 30 100.0 34 .............................. TAAACATACTTGATACAACTGCATTCATTAGTTC 22358 30 100.0 35 .............................. TTTAGAGTTTTCAGAGTCTCCAATGTTTCACTTCT 22423 30 100.0 35 .............................. GTAGTAACACGAGGGCTCTTTAGTTTATCAACAAA 22488 30 93.3 0 ..............CA.............. | ========== ====== ====== ====== ============================== ===================================== ================== 27 30 99.6 36 ATTGAATAATTACATTGGTAGTATTTAAAT # Left flank : AGAATTCTATCCTTTTAACATCAAGGAGAAGATTTAATGAGTAGGAATAGATATAATTTTAACTATATTTTTCTTTTTTATGATGTAAATGAAAAAAGAGTAAATAAGATTTTTAAAGTATGTAAAAAATATTTAACACATTATCAGAGATCTGTTTTTAGAGGAGAAATAACACCAGGTAATCTTCTAAAATTAAAAAATGAGGTAAGGAAAGTTATTAATGAAAAAGAGGACTCTGTATGTATAGTCAAATTTATAAATGATAGGTATTTTGCAGAAGATACACTAGGAGTGCTATGGAAAGAAGATGAAGATTGTTTTATATGAGTTTTCCAAGTGGAAAAATAAAAAAAACTTTGAAATCCTCATAAAATAATTGTTTGCAACGAAAAATATAGAATGTTGAAAATTTGATGTGAGGTTGGAAAAAAATTGAGGCATTCCTTAAAATATGGTATATTGAAAGAAAGTTGTGATTTCAGAGTAAGCTGATTATGACC # Right flank : TATACTTCACCTAAAAACTTACACAACTAAGAAGGACGGTGGAGTTTTTTAGTTTTAAGAACAGAGATTATTTTTATTCTAAAAGAGGCCTATATGTGGTATAATTAAAACATTGAAATAGAAGTAGGAAGTGAAATGATGGGAAAAATTATTTATTTTATAGGTGGAGCTAGAAGTGGAAAAAGCTCTAAAGCTGAAGGGTATATTTTTGCAAGAAATTATACTAAAAAAATATATGTTGCAACAGGTATAGCTTTTGATGAAGAGATGAAAGCTAGAGTAAAAAAACACCAAGAACAACGAGGCAATAACTGGTTGACAATTGAAGGATATAAAGACCTTGTAGAAAAAATAAAACCTCATGTTGAAGCAGGTGGGGTAATTCTTTTAGATTGTTTAACAAATATGGTAACAAATTTGATGATAATGGATAAAGAGTATGACTGGGATAAAATTTCAGTTGAAGAGGTTGAACAGTTGGAAAAGGAAATTACTGATAC # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAATAATTACATTGGTAGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.80,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 27606-27898 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADRGL010000019.1 Fusobacterium sp. DD29 JD41_18, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 27606 29 100.0 38 ............................. TTACTGAAGAAGTTACTGAAGAGACAGAAGCTCAGGCA 27673 29 96.6 37 .............C............... TCTTGTTAACAAGTAAAGATTACAAGTTGCCATATTA 27739 29 96.6 37 ........T.................... CTACAAAATGGTACTGATAGAGCTTTTGGATGCGTTG 27805 29 100.0 37 ............................. GAAAATGACATTCAAGAAAAAAGTGTTCATGAAAGCG 27871 28 93.1 0 .............C.........-..... | ========== ====== ====== ====== ============================= ====================================== ================== 5 29 97.3 38 TCTTAAAACATCCAATGTTACTATTCAAT # Left flank : TTTATATTCAGAATGCTCTTGTAGAAATATACCTTTAACTAAACTATAAAACAATTTATCATATGTTTTAAACTCTATACTTTCTGAGAATTTTTTATCACAGTACTCTCTATTTTTATCTTTTAGTTCATTTATAATGGAGTTATTATAGCTTAAAAAAAGCACCTTCTTATGTTTATTAAAAAGAGAGCCTGCTTGATCCTCTAAAATCATTTCAGCTCTGGCAAGTCCAACTAGTGTTTTCCCACTTCCTGCTGTCCCTTTTACTATTAAAATCCTTTCACTAGAGCCCACTATTGCAGCCTGTTCTTTTGATAGCTGTATCTTCATTTGACACCTCTTTATAAATGTGACCTGTTTTTCAATTTTATTATCCTCTATCAAGACCATATAATCAATACTTTTTTACTAAAAATTAAGTATTTAATTTTTAATTTCTCATTTTTAGCCATCTAGATATTTAAAATTTTTTCAAAAAATAAAAAAGACCCCTGAAAAGG # Right flank : TGGTCAAATAACGACTTGTTATTATTTTATTTTACGTAACTCCCTTTACATCTAAAGTATAACATATTTTTTCCAAGCAATAACAGATTTTGCCTTTATTTCCATAAGTATCAATTTTAGATTAATTCACAAATTATCTATCAGTTCACTTGGAAAATTTACTAATTAAATGTACTACACCCTCCATCTTACTTATCCAAGACTTTAGGTGCAGTACACAAAATTATTTTAATTTACTATTCTTCTACTGGCTCTTTACACTCCTTAAATTTATCTATCACAAAGATATCCATACCATTAGAAACCTGATACTTTCCTTCCAGTTCATATCTTCCACTCTTAATAAGTCTTTTGCAGGCTCCAAAATCTTCATTATCAAGAAGATAAAGATATAAATCTTTTCCACGTACCTTTGCCTGGCAGCCTTTAGTGACAACATAAGCCACTCTGGTAATAACTCCATTATTCTCTTCTCTCTCTTTAACTTTTAGCATCTTATC # Questionable array : NO Score: 2.84 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCTTAAAACATCCAATGTTACTATTCAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //