Array 1 80342-77973 **** Predicted by CRISPRDetect 2.4 *** >NZ_LFEJ01000012.1 Franconibacter pulveris strain DJ34 Bact_Abyss2_96, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 80341 28 100.0 32 ............................ CGGGATTCACGCCGGTGTTAAAGATGACGTGA 80281 28 100.0 32 ............................ GCTGGCGACGTTAATACGACGCGCTCTACGCC 80221 28 100.0 32 ............................ TCTTTCGCCTCTTCCAGGATTTCCCGGTAATC 80161 28 96.4 32 ...........T................ TTTACCGCTTTTTGCGTTGACTGGCTCAACGT 80101 28 100.0 32 ............................ AAAATATTTGCTGTGGCTGTCTGCCGTAATTA 80041 28 100.0 32 ............................ AGGTACTGGTTTTAGTCACGTCGCGCCAGTTC 79981 28 100.0 32 ............................ TCATTGCTTGATATGCGGCACGGCGGGCTATT 79921 28 100.0 33 ............................ CGTGAAAATTCATTTTTCGACGGTATGAATAGT 79860 28 100.0 32 ............................ GGTTCGCCGACGACGACACGGCAGGGGAGTAT 79800 28 100.0 32 ............................ AGTCGTCGTCCCAGATGCGCATCCATTCCGGC 79740 28 100.0 32 ............................ GACAGCGAACGGTCTGAGGCGCTGGGTTACTT 79680 28 100.0 32 ............................ TCAGCGCACTGATACACCGGCTCCGCCTGTAC 79620 28 100.0 32 ............................ GCTAAGTATCGCAAAGGCCTGTGGTTTTATCA 79560 28 100.0 32 ............................ TATTGAGGGCTGTGTATGGATGAAGTGCAAAA 79500 28 100.0 32 ............................ GTTCGCAAATCTCCCGCGTCTCCTGATAAAAA 79440 28 100.0 32 ............................ AACGGAATCTACCAGGTACGGATGCGCCGCAA 79380 28 100.0 32 ............................ AAGCGGGTACGCTTGAAGTTTTCAGGAGTGGC 79320 28 100.0 32 ............................ GCGCCGTGCGGGTCAATGGGCGATTCCTCCAC 79260 28 100.0 32 ............................ GGAAACGCCTTCAAAGGTTGTTATTGTGGCGT 79200 28 100.0 32 ............................ GTCACTGCTCAGGACATACACTTCAACGTTAC 79140 28 100.0 32 ............................ GTTACGCGCCGCTGGACGTGTAAAAATTTAGT 79080 28 100.0 32 ............................ GGTATGGAATGGCGAGGGATTGCCGCCAGCGG 79020 28 100.0 32 ............................ GTAGCGGCAGCGTTGGCCGTCATTTCCGACGG 78960 28 100.0 32 ............................ ACGTACCAAACCCAAGATAAACCCCCGGATTC 78900 28 100.0 32 ............................ TCCGCGATATCCAGCGGGCCGGGCATTATTTT 78840 28 100.0 32 ............................ CGCGAGCTTCTGGCGTACCGCAAAGAGCGGGA 78780 28 96.4 32 ...........T................ TGTACATCGTGCCGGAGCTGGAGTTTGTCGAA 78720 28 96.4 32 ...........T................ ACGTCGCAAAGAATTGATCAGCGGGCAGAGAT 78660 28 96.4 32 ...........T................ AAACTCGCGTGTCATAGATGAGATAAGGTCTA 78600 28 96.4 32 ...........T................ CACAGGCACAATTTTTATTTTTCGGTCATATC 78540 28 96.4 32 ...........T................ AATCTTGTTGGCGCTCACGCCAATGATTTCTC 78480 28 96.4 32 ...........T................ TTCCCGCACCCCATGGCGCGTACTAGATAGCT 78420 28 96.4 32 ...........T................ TTTCAGCGTTCGCTCAAATCGACGGAACAGAT 78360 28 96.4 32 ...........T................ GTACATATGCAGCGCGTTCCCGCTTAATAACG 78300 28 96.4 32 ...........T................ AGACGGCCTTCGCTGCTCTGTACCGTAATTTT 78240 28 96.4 32 ...........T................ AGCAGCTCACGCTCGCGGCGCTGCAGGGCTTT 78180 28 96.4 33 ...........T................ CCCTGGGGCACCGGGCCAGAGCGCCCGCCCGTG 78119 28 96.4 31 ...........T................ ATTTTGCCAATCAGAATTTCGGGATATTTGC 78060 28 96.4 32 ...........T................ AACAATGAAGAGATCCCCGCCTGGGATAAATC 78000 28 96.4 0 ...........T................ | ========== ====== ====== ====== ============================ ================================= ================== 40 28 98.7 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CGGCGCTTGCAGAACTGGAGGCCACACGCTGGCGTGCCAGCTTGCAGGATTATTGCCTGAGCAGCCCGATAACCCCGGTGCCGCAGGTGCAGGGTTGGCGTGTGGTTTCTCGCGTGCAGGTGAAAAGCAGCCCGGCGCGGCTGATGCGCCGTTCTGTTCGCAAAGGCTGGCTGACGGAAGAACAGGCGCAGCAGCGGTTGCCGCATTTACAGGAGCAGCATACTGCTCTGCCCTGGCTCAATGTCAAAAGCCTTTCTGGCGGCCAGCAATTCCGGCTTTTTATTCGCCACGGCGAGCTTCTGCCTGCGCCGGTAAGCGGCACCTTTAGCAGTTATGGGTTAAGTGCCCAGGCAACCGTCCCCTGGTTCTGACCCTTTTTTCAACCGCCTCGCTAACCTATTGATTTTTATTAGCGGGTTAGCGAGGCGTTAAAAAAGGGTTTTGCTGCTGAAAAGGGCGTTTTTGTTTTTATGATAAGGAGTTAGGTCTATATCGCTCTT # Right flank : TGCCGCGCCGCCATGCTCACTCAACGCCCGGTTCACCGCCGCCCGGGCGCTCCTCCTCGCTTTTTCCCGTTGAAACTTGACCTTCCCGTTGGGGAAAGGTTTAAGCTCATGGCATGCCTGTCGTCGATAAGGAAATAAGATGCATCGCCGTGATTTCTTAAAATACAGCGCCGCACTGGGCGCGTTCAGCATGCTGCCTGCCTGGGGGCGCGTGATACCCGCGGCAAAACGCCCGACCTTACCCATCCCCGAACTCTTAACGCCCGACGCGCAAAGCAAAATTCGCCTGACCGCCCAGGCGGGCGCCAGCCAGTTCAACGGCCAGAAGGTGGCGACGTGGGGCTATAACGGCAACCTCCTCGGCCCGGCGGTAAAGCTCACGTCCGGCAAACCGGTGACGGTGGAGATCCGCAATGCGCTTCCCGAGGAAACCACAGTGCACTGGCACGGCGTGGAAATACCGGGCGAAGTGGATGGCGGGCCGCAGGGGGTGATTGCGT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-1] Score: 0/0.41 # AT richness analysis in flanks prediction: R [23.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 91846-89237 **** Predicted by CRISPRDetect 2.4 *** >NZ_LFEJ01000012.1 Franconibacter pulveris strain DJ34 Bact_Abyss2_96, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 91845 28 100.0 32 ............................ AGACCGATGACGAAATCTGTCGCGGTCCGGTC 91785 28 100.0 32 ............................ CAGGCGATGAACAATTTCGGCTGTGACGTGCT 91725 28 100.0 32 ............................ GTCACGGCGTCATCTTGAGAAAATATCTCCTG 91665 28 100.0 32 ............................ ACAGTGATATCGTCCGGCAACTTGGCAACAGC 91605 28 100.0 32 ............................ ACAGTGCTTGCGTACCTGGAGATAGCGCCGGG 91545 28 100.0 32 ............................ CTGACGCGCGACAAGCAGTCCGCACTCATTCA 91485 28 100.0 32 ............................ TGTCGATTTCGGTGTGACAGAGGGCCTGCGCA 91425 28 100.0 32 ............................ ATTACCGTCACCAAAAACTGAGTCATCGGCGA 91365 28 96.4 32 ....................T....... TGCTCCAGCGTCACACTGCCGTCCGTGACGGT 91305 28 96.4 32 ....................T....... ATTCGGTGTCGGAAAGTTTTTCGCCGTACCAT 91245 28 96.4 32 ....................T....... TTCCTGCAACATTTTAACAGTCATGAAATCCG 91185 28 96.4 32 ....................T....... AGACTCAGATAAAGATATCCCTCTCGCAGTAC 91125 28 96.4 32 ....................T....... AAACCGGATATCTATGGCCAGGTTCGCTCATT 91065 28 96.4 32 ....................T....... GATGAGATGGAATCGCTGGTGCGTGACATGAA 91005 28 96.4 32 ....................T....... GTCATTACTGGCCTCCCGCGGCGTTCGCCAGC 90945 28 96.4 32 ....................T....... AGCGGCAAAAAGAGGGTATAGCTGTAGCTAAG 90885 28 96.4 32 ....................T....... TCACTAACGGCAAGTACGTCATCGCCGACGAC 90825 28 96.4 32 ....................T....... TGGCTCGAGCCGTAATGAATACGTAACCTCAT 90765 28 96.4 32 ....................T....... GAGAAACGCCTGCCCGGCTTTGATGGCTCCGA 90705 28 96.4 32 ....................T....... TGGCGATGGAGGGCGCGCGCATGGAGCAGCAA 90645 28 92.9 32 .............T......T....... AGCGCGCCGATCTGCGCGAGAATGTCGTTCAT 90585 28 96.4 32 ....................T....... AGGCAAATGTTGACGGCACGTGGACAGAGTGG 90525 28 96.4 32 ....................T....... GAGACAACTCAATCGCCAGGGCAAACCGCAAA 90465 28 96.4 32 ....................T....... AACGGCCTGTCCATTTGGGACAACTCAGCCAT 90405 28 96.4 32 ....................T....... GTTGGGGTGCTGTTGCTCCAGGTAGGCCGCCA 90345 28 96.4 32 ....................T....... TGACGTGCGCCCGGTTCCGCACCGCAAGCAGC 90285 28 96.4 32 ....................T....... TGGGCGACGCCTGAGATGATTGACAGCCTTTG 90225 28 96.4 32 ....................T....... AAAGTGGCTGGCGTATCCGCTGGACAGGTGGC 90165 28 100.0 32 ............................ ACGTAGTTCACACGCAGGTAGCGCTTGATGCC 90105 28 100.0 32 ............................ AGGTGGCGAAAGCCCGCCAGCGCGCCGCGAAG 90045 28 100.0 32 ............................ CACGAGCCGCCAAGACCGGCCTCCATGATTGG 89985 28 100.0 32 ............................ ACGCAAGCCGCGAGGACAGGCTTGCTGGCGGT 89925 28 100.0 32 ............................ ATCGGCTTGTGATTGCATTTCGGGCAGGCGTC 89865 28 100.0 33 ............................ AAATCTGCGCCGGTGGCAAACTCACGGGTAGCA 89804 28 100.0 32 ............................ TGGATATTAACGCGCGCCGGGTATCGTGTGAC 89744 28 100.0 32 ............................ ACTACTGGCGCGGCTGCTACAAAGGCAAGACG 89684 28 100.0 32 ............................ ATACCCTGTATCGCCGTAATGGCCGTTGTCAG 89624 28 100.0 32 ............................ GCGACACGCCCGCGCGGCTTTCTGATTATCTG 89564 28 100.0 32 ............................ TACCTGCCGATAGCCATTCCGGCCGGTCTGCC 89504 28 100.0 32 ............................ GTCTCAAGCGCGCGCTCGCCTGGCGTCGAGTT 89444 28 100.0 32 ............................ CAAATCGCCCTCCAGTTCCGGCTCCGCACTGC 89384 28 100.0 32 ............................ ATAAGAAGCATCTACAGAAATCTGAATTGTGT 89324 28 100.0 32 ............................ CAAGGTAGGGCAGGGCGTGCCGCCAACGTGCC 89264 28 82.1 0 ......................ACT.CC | ========== ====== ====== ====== ============================ ================================= ================== 44 28 97.9 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGGCAGTGAGATCGGCCATGTCTTCCGCTTCTGATTCACTTAACGCAAAGCTACTGGCGGAAAAGCCCATCAGACAGCCCAGCAACATCACCCTGACCCACTTGTTCATTACGTCTACCACTCGCCAAAAGATACCAAACGATAGCACATTTCGTTCAGACGCGACGAGGATATTTGATCCCTTTTATGGCGGATAAATGCCCGTATGACGGGGCCTGGCGCGCTTTTCAAAATGAAAACAAGATGATTTAAGGAGAGGTGAAAAAGTAAGCGGCAAACGCCGCGTTTCGAAAGCAAAAAGCGGCCTCGCCAAAAAGCGAAAGTGAACGAAACGGCGCACGGGAAAATTGACTTTGACTCTAACGCCCAAACCCTTTTTTAACGCCGTTTTTTAAGCGATTGATTTTAAAGGCGCTATAAAAGCGCCGGAAAAAAGGGTCTGCAACAGCAAATTAAAGGTATTTGGTGTTAATACAGCGAATTAGCTAAAATCCGCTCTT # Right flank : CATAACAATTACCTCATAAAAACGGCCATTTATTTGGTTATTAATAATGCTTTTATAATAACTAACAATCTTGGCATTTATCGGTTTAATATTTGTATGGGTTATGATCCTTTTTCATCTTATAAGCGAAAATAAATTATCCCGGCATTATTTCCGTCTGGTTTTTATCAAATTATTTTATTTTTAAAAGAGATGTTTCTGTAAGGCGCTTACAGCATTTAATTTATTTTTCTTTGCGTTATATCGCATTTTGTTTTCCTTGCGTTGCTAGAATTCGCACCACTTTAATAAGGCGAATAATTGTAATGAGTGAAGATGTCAGCCCTTCCGATCTTAAAACCATTCTGCACTCTAAGCGCGCCAACATTTATTACCTGCAATATTGTCGGGTATTAGTCAATGGCGGGCGCGTTGAATATGTTACTGAGCAAGGTAAAACGTCTCTGTACTGGAATATCCCCATAGCGAATACCACGGTCGTAATGCTCGGCACGGGCACC # Questionable array : NO Score: 5.95 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.79, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGTACAGGCAGTTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //