Array 1 248875-251463 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUCF01000004.1 Klebsiella pneumoniae strain 183F8 contig_0004, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 248875 29 100.0 32 ............................. TATATAGTACGTTTTCACTTTCTTATTCCTTA 248936 29 100.0 32 ............................. TTAACCATTCTCCCCGGCTCAGTACCTGCCCG 248997 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 249058 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 249119 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 249180 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 249242 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 249303 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 249364 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 249425 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 249486 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 249547 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 249608 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 249669 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 249730 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 249791 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 249852 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 249913 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 249974 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 250035 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 250096 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 250157 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 250218 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 250279 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 250340 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 250401 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 250462 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 250523 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 250584 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 250645 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 250706 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 250767 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 250828 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 250889 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 250950 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 251011 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 251072 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 251133 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 251194 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 251255 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 251316 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 251377 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 251435 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 43 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //