Array 1 296220-296433 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAEDW010000001.1 Gilliamella sp. ESL0232 Ga0227298_101, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================== ================== 296220 30 100.0 30 .............................. TATGCAGCACAGCATTAACGCACACACCAT 296280 30 100.0 30 .............................. ATTTCGGATATTTATTTTTATCAAATTTCC 296340 30 93.3 30 ...................A.........T TGTTTTATCACTACTTGCTTTAAATCGATT 296400 30 83.3 0 ....C..T....T....A......T..... | TA,T,T [296421,296428,296430] ========== ====== ====== ====== ============================== ============================== ================== 4 30 94.2 30 AGTTTACCGCCGAGTAGGCGGTTTAGAAAA # Left flank : TCATCCAACAGCTCGTCTGAAAGCCCGTTGGTTTTATAATTATGAAATTGATAGCTTACATGATGATCATCAAGCCAAGTAAAAGCTTTTTTCATCGTGTTGCAGTTTTTGATACCGTAGATGATGTACATAGTAGGTGATCCAACATTGAAAATAATAATAAAGATTATAACAGTTATCGGCCTGATGCGGCAAACTAAAGGGATTTATTTGTTTTAATTCATATTAATACTCATAGCTAATGTTAGTTGTTAATGCCAAATAGTCGCTAGTGAAAGCTTGAAATTTTAAATATTTTGGATGGTGAGTTAAGAAATGAATTTTTGAACAGATAATTTCACTCATTTTAAAAAGATCAAACTATTGCTAACCCTTTTTTTTTAACAATAAATAAAATCAAATAAAAACAACACACTAAAAAAGCTCTAAAAAAAAGGGTTTTCAAAAGCAAAAATCCTATTTGTCTTTTGCGAAACAAGGTTTATATTATATCGGTTTCT # Right flank : AAAATAGAAATTTCTGTATAACTGGTTGATTTTAATAAAAATAAAAAAATTAAATAAAATCAATACTCTACCTAAACGATTTTATGGGCGTAATACATCCCATAACATGATAAGGATTATATGTCCATTGGTTGTTAGGTAATTCACTAATTCCTTAGTTTAGAAATTATCACCAATATTCATTATTTTCACAAAAGTTAAGACTTACAAAACCTAACACCGTATTCTAATTAAAAAATTGCATAAAAAACTAGCCAAGTTTTTTTAAAATAGCTATACTTTAATCTCCTTAAAGGAATAGTTCATTAAACAATCAAATAAACATAAAAATTAAAATAAATCATTAATTTACTTGACAGGTGAGCCGTAATGCATTATCATTTTAAACACCAAACACCAAACACCAAACCTGGCAAAACTATGTCTTAAATTTATCAGATAAACACACTAGTTGGATTTTTAACCCCACCACGTTTATATCTTCAAAGTTATTTTTCAAA # Questionable array : NO Score: 2.57 # Score Detail : 1:0, 2:0, 3:0, 4:0.71, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTTTACCGCCGAGTAGGCGGTTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.20,-10.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [71.7-88.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 7831-8038 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAEDW010000015.1 Gilliamella sp. ESL0232 Ga0227298_115, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 7831 29 100.0 31 ............................. ATATCGGTACCATTGGTGGGGAGTTCCCCCC 7891 29 100.0 31 ............................. CTGCTAAATGATTATCTAGCCATGCTGCACG 7951 29 96.6 31 ............................A TCTCCAGCCCAAATTGATAACCGTCTACTCA 8011 28 96.6 0 ....................-........ | ========== ====== ====== ====== ============================= =============================== ================== 4 29 98.3 31 GTTTACCGCCGCATAGGCGGTTTAGAAAT # Left flank : CTTATTATTTAATGGTTGTAGCATTAGTGGGTTTACTTACAGGCATAAAAATGAAAGAAACCGCAAACCGTCCACTCCGCGGCGCAACGCCTGCAGCATCAGACAGGTCAGAGGCAAAAGAAATATTATCAGATCACTTTGACTCAATAGAACAAAGAGTCGAAGATATAGAACAGCAGATCGAAACATTACAACAACAGCGTCAGAATTTAGTCGATCAACATCCTAAGTTAGATTGATTTTTTTATTTTTTGGGTTTTGTATATTTTGTTTAACATACAAAACCCAAATTTAATAAAATCAAAACGATACATAAGTATTTTTTAACGATAAAATTGACACATCATAGAAATAGCTAAAACACTGCCAACCCTTTTTTTTATTAATAAATAAAAGTAAATAAAAACAAAGTATTATAAAACCGCTATAAAAAAGGGTTTTTGAAAACAGAAATCCTATTTGCCTTTTGCTAAACAGGGTTTATAGTATATCGGTTTCTA # Right flank : TTCTGGCATTATTATTTTTAACAGCATGACGTTCACAGCTATATAATAGCTTGATTTTATTCAAAATTATTAAGTTAAAAAATAAAATCAATATTCTACCTGATTGATTTTATATAAAAATGTACCGATAATTAAGTGCGCTAAACAAGAGCGATAAATATGTGTAATTTTGGCACAATGTAAAAAATAAAAGAGTTTGAAAGTTTACTGTGAAAAAACTATTTGCGCATTAACTTACTATGATATTGTCGACGATATTCGGTTGGTGTTCGTTCTGTCTTTTTTTTAAAAATCCGACAAAAATAATTACTATCTTTAAACCCCGATGCTAGAGCAATTTCTTTTATATTTAGATCATAATCCTTTAGTAGCGATTTTGCATATTCTAAGCGAATATGATTTAGATATTCATTTAGCCCTATTTTTCCCTCGCTTTGAAATAGATGTGATAAGTAATTGGGTGAAATGTAAAACATATTAGCTAAAAAGTCGCGTGTAAT # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTACCGCCGCATAGGCGGTTTAGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: F [matched GTTCACCGCCGCATAGGCGGCTTAGAAAT with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.70,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 95296-95567 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAEDW010000008.1 Gilliamella sp. ESL0232 Ga0227298_108, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 95296 28 100.0 32 ............................ ACTTGGCAATATTCGGAAACATTTCTAACCAT 95356 28 100.0 32 ............................ AACCCCAAAAGAGATAACCGATGCAATTCATC 95416 28 100.0 32 ............................ AACTTTTGTTCTGCTCGGTACCAATTTTTGTA 95476 28 100.0 32 ............................ ATCATAATAATTTATTTTTGTGTCAACATATA 95536 28 89.3 0 .................TG....T.... | TC,T,T [95556,95563,95565] ========== ====== ====== ====== ============================ ================================ ================== 5 28 97.9 32 CTTCAATGCCGTATAGGCAGTTTAGAAA # Left flank : AAAGCAGATATACAGCAAAAATCATCGATAAGTGATTATGCTTTATTGATGCCTATCACAACAGTACCGGCAACGATAAAAGGCTATTTGCATTTGAGTCGTGTTAATCCTAAAGGTCAGAGTGCGTTAAGACGTGCCGAAAAAAGATTAACAGCACAAGGTAAATGGACACCTGAAGTGAAAAATAAAATGGTTGAAAAGTGGGGAAGCGTTCATTTGCAATACCCACATCTTCATTTGAATAGTAAAAGTACAGGTCAAAGATTTATTTTGTGGTTAAAACAAGAAAAATGCCCAGAGCCAGTGCAAGGCACATTTAATAGCTATGGATTAAGCCAAACAGCCACTGTTCCTGATTTTTAAATCATTAACCCTTTTTTTGGGGATAATTTTAACATATTGATTATTATTGATATTAAAATAGACTCAAAAAAAGGGTAAAAATTGGGAAAAGTGCAGTATGCTCTTTTACAATAAGGCACTATTGAGATAAAATTCTA # Right flank : AAAGTAGAAATTTCTGTATAACTGGTTGATTTTAATTAAAATAAAAAATTAAATAAAATCAATACCCTACCTGAGAGATTTTATGGGCGTAATACATCTTATAACATGGTAAGGATTATATGTTCATTGGTTGTTAGGTAATTCACTAATTCCTTGGTTTAGAAATTATCACCAATATTCATTATTTCCACAAAAGTTAAGACTTACAAAACCTAACACCGTATTCTAATTAAAAAATTGCATAAAAAACTAGCCAAGTTTTTTTAAAATGGCTATACTTTAACACCTTAAAGGAATAGTTTATTAAACAATCAAATAAACATAAAAATTAAAATAAATCATTAATTTACTTGACAGGTGAACCGTAATGCATTATCATTTTAAACACCAAACACCAAACACCAAACCTGGCAAAACTATGTCTTAAATTTATCAGATAAACACACTAGTTGGATTTTTAACCCCGCCACGTTTATATCTTCAAAGTTATTTTTCAAATT # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCAATGCCGTATAGGCAGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: F [matched CTTCACTGCCGTATAGGCAGCTTAGAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.70,-4.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //