Array 1 19075-22033 **** Predicted by CRISPRDetect 2.4 *** >NZ_SNWX01000034.1 Halanaerobium saccharolyticum strain MA284_T2 Ga0255679_134, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 19075 37 100.0 33 ..................................... TCAGTGCGTGAAGTTGGAGGTAAGGAAAAATAT 19145 37 100.0 35 ..................................... ATAAATTTAATGATAATCCTGATCTAATAAATGAA 19217 37 100.0 34 ..................................... TAAAAACAGTTTCATCATCAGTCAAATTTTCAAA 19288 37 100.0 35 ..................................... TCAATTTACTTTTAATCAACCAGATTATCTGATGG 19360 37 100.0 34 ..................................... ATCAACTATACGCTGACAGACAGGGCACCAATAA 19431 37 100.0 34 ..................................... CCCTGAGGGGATGGCTAAGGTCGGTAACCTTTGG 19502 37 100.0 34 ..................................... TTTGATACCTTCCTGCACCAGATCAATAGCTTTG 19573 37 100.0 34 ..................................... TTATAAAAGGTGTTACCTGATACCTTTCTAATAC 19644 37 100.0 34 ..................................... AGCAGTACCGGTCATTTTTGTTACAACAAATGAG 19715 37 100.0 34 ..................................... TCCACCACCGGAAACCGGCTGGACATTAACTGTC 19786 37 100.0 33 ..................................... TCTTTGATTTGATGTCATACCCTGATTATACAA 19856 37 100.0 34 ..................................... TAATGCGCTGCTGTCCCAACCGCTTGCTGATGAA 19927 37 100.0 34 ..................................... ATATACAGTAACTCTTTTACTTAAGTATTTTGTA 19998 37 100.0 36 ..................................... TACTGATACAGTGAACCCAAAACTTGACTGATCAAT 20071 37 100.0 34 ..................................... AATTGTCCCATCGTCTTTTTCATAGTCCCATAAA 20142 37 100.0 35 ..................................... TATCTGATCAACAAAGCTTGTTTGCGAAATTACTC 20214 37 100.0 34 ..................................... TTTCGATTCTTTTGACATTTCACCCTGCAGATTA 20285 37 100.0 34 ..................................... AAATCAAAGGAAAGACAATGACTGAATATATTAG 20356 37 100.0 35 ..................................... TTTATTAGTATCGTTGCATTCTGCAGAGTGTTTAT 20428 37 100.0 34 ..................................... TAGTTGAGAGTAATGGTTACCCCACAATAATAAA 20499 37 100.0 34 ..................................... TAACTAACCAAGGCCTTATTGTATTAACAACAAA 20570 37 97.3 34 ...................A................. TAAATCCTGCAGTATTTCTCTTTTCTTTTGAGTG 20641 37 100.0 35 ..................................... TGATAAATTATATGAAGTAGCCCAGGACATAAAAC 20713 37 100.0 34 ..................................... AGCTGGGAAACTACAGCTACCTGGGATGCAGGCG 20784 37 100.0 34 ..................................... CCTGCTAACATAACTGTCAAATTATCTGGCACAT 20855 37 100.0 34 ..................................... AGGTAGATGTGTTGATGCTTTGATTGAGATAGAA 20926 37 100.0 35 ..................................... TAATTTTTCATGGATTATAATGCCGGAAGAAACAA 20998 37 100.0 34 ..................................... CGCGTCCATAACCACGAACTCTTTTTGCTTTCGG 21069 37 100.0 35 ..................................... TGGACAACCTTATCTTTTGGATGCTGCCAACAATA 21141 37 100.0 34 ..................................... ATCAAATAAAAGCTAATGAACTGGTAGTTATAGG 21212 37 100.0 34 ..................................... CGCGCCTTTATCTTTATGAAAAGGAACTTGTGAT 21283 37 100.0 35 ..................................... CGGCAAGTGTGGTGGTTCAATGGTAGGTAATCGAA 21355 37 100.0 34 ..................................... AGAGCTAAAGAAATTTGATGATCATGAGAAAGCT 21426 37 100.0 34 ..................................... TATTAAAGAGTGGCCGAAAGGAGCTAATGAATGA 21497 37 100.0 34 ..................................... TATAACCTCCCTATTACAACATAATTACCGAGAG 21568 37 100.0 35 ..................................... AAAACGCCAAATATTTATACTACCATCAGAATTTG 21640 37 100.0 35 ..................................... TCCGCACACCTGGCAAATCAATATTTTGTAATCAG 21712 37 100.0 35 ..................................... TTCCATAATCTCAACTTTTTTATGATCAGTACGAA 21784 37 100.0 34 ..................................... CGGGAGTGCTTCTTTCACTTCCTTGGGATTATAT 21855 37 100.0 34 ..................................... TCTTTGATTTAGGTTGTTCTGGCTGCTCTTTATC 21926 37 100.0 34 ..................................... TCTGCCGCCTTTGGTTTCTTTTAAAGTTCTATGT 21997 37 89.2 0 ................................C.TTT | ========== ====== ====== ====== ===================================== ==================================== ================== 42 37 99.7 34 ATTGCAGTCCCCTTTGTTGGGGACTGAGAATTGAAAC # Left flank : TTATTTATCAGTAAAGGTGTGATAAAATTGATGTATGTTCTGGCATACGATATTTCAACTGAAAATGCTAAAGGTAGAAAAAGGTTGAGAAAGGTTGCTGAAACCTGTGAAAATTATGGACAAAGAGTTCAAAAATCAGTATTTGAATTTCAATTAGATGACAAAAAATTTTTAATGATGAGAAATGAAGTATTGGAATTAATGAACAAGAAAAAAGATAATATAAGGATCTATAAAATAATTGCTCCAAAAGATAATTATGTAGAAGAACATGGGAACTTTAAGTCTGTAGATTATGATAATGACACATTGTTAATTTAATTTGCGAAGGGGGAGTGTTTGTTAAATTACTGCTTCTTTCGCAAATGGTCATAAATACTAATTTAAGAGCCACTTAGAGGAGATGAAGTAAAATGATTTTATTTTTTGTGGAGGTGATAATGGATATTCGCAAAATAAGCTTTATGAATTTTGATTTAACAGGGCTAATTTAGCCTGCT # Right flank : TTAATCCAACTTTAACTTTAAACAAATAAATAATTAATATTAGCCTGCTATCCTTTAACTAATATAAATAATATTAAGAGGAGCTGATAATAATGGCTTATATTAAATTATGTCCAGAATGCAGAAGTAGAAGCATTAGTGCCAGCAAAGAAGAATGGACCTGTCCTCACTGTGGTGAAGATCTTTCTGATGAACCAGTATTTCGTCAGATTAAAATCAAGAAAAATTGGTGGAATGAAACAAAAGCTAAAAATGATCAAAAAGTTCTCGCTTAAATAAGTTTGAATTTTGAAAAATTCTCCTTGTTTAAAATTAGAATTCATGATATTATAAAATCAAATTTATAATAATCAGAGGTGAAATATTTAAAAAGATGATCATTAATACTTTAACCATTCAGTAACTGAAAACTAAAGCAACAAACTGGTTAGAGTATTAGAGCAATATATTTCCATAATTTAACATATGATTATTTAGATAATTAATAATCTCTTCTTATT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAGTCCCCTTTGTTGGGGACTGAGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.60,-12.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA //