Array 1 12606-16903 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP035514.1 Haematobacter massiliensis strain OT1 plasmid pOT1-4, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 12606 29 100.0 32 ............................. CAGTTCCGACGAGAGGACGAAAAAATGACAGA 12667 29 100.0 32 ............................. AATTCAACCGCTTCTGGATGACGGTCGCGTTC 12728 29 100.0 32 ............................. CTCTTGACGCATTTGAGCGCGATGAGCGCGCC 12789 29 96.6 32 ............................T CCCGACCAATATGTCGAGATGAAGATCAACCC 12850 29 100.0 32 ............................. TTGAGAGCAGAGACCATTGCCCGCACCGAGAG 12911 29 100.0 32 ............................. GTCGTGGCGGACGATCAGTCGGGCGTGAATGA 12972 29 100.0 32 ............................. ATCGAGACACGGCGCGAGGGCGCGATCACCAT 13033 29 100.0 32 ............................. GTTTCCAGATCTTCGGCGCCAAGGAACGCGAG 13094 29 100.0 32 ............................. ACGTCTCATATCCGGAACATCCTGACGGCAAG 13155 29 100.0 32 ............................. TAGGCCAGATCAACCAAGGCGCATCCGCCTCA 13216 29 100.0 32 ............................. GCGGTTCTTGTGCAGCTCCTCATGCGCCGCAA 13277 29 100.0 32 ............................. ACAGCCACGCCGCGAGTTTTCCGGAACCGTTC 13338 29 100.0 32 ............................. GCGAAACTGTCGGACTCCGAACTTATGCAGAA 13399 29 100.0 32 ............................. ACGCCCGAGGATATCACGATCCGCCGCAACAT 13460 29 100.0 32 ............................. GACTTATCGGCGCGGATGTTGACGCGATCTAC 13521 29 100.0 32 ............................. GCGGTGGCTGCGGCTGCGGTCACTCTGAAGCG 13582 29 96.6 32 ............................T GTTGATCTGCGGCCTGTTTGTTGCACGAAACC 13643 29 100.0 32 ............................. CGGGTAGCACACCCCATTCCGCATCATACCCG 13704 29 100.0 32 ............................. CCATGTCCCCGATCATCGCGGCGCTTGGCGGT 13765 29 100.0 32 ............................. CCAGTTCATAATGCCATCGCGTTCAGCGTACA 13826 29 100.0 32 ............................. TCACGCCTCGGTCGCGTCTCATCACCGCCTAT 13887 29 100.0 32 ............................. CCGCAGGTGCCTGAGAGTGGCGACGGCGGCGA 13948 29 100.0 31 ............................. GCATGGGTGCGCTGAGGAATAGGCGCGCTAC 14008 29 100.0 32 ............................. CGATATGCCCAGTTAGTTTAAGGGTGATAAAT 14069 29 100.0 32 ............................. GTCATACCTATGCCTTGCTGCCTCCCTCTTTA 14130 29 100.0 32 ............................. AAATTCACCAATAAGAACACCCCTTGACACCC 14191 29 100.0 32 ............................. GACCAGAGAAATTCGCCAAACCATTCACCAGG 14252 29 100.0 32 ............................. ATGGTGCACCGAATACGTCTATGGACGGATGG 14313 29 100.0 32 ............................. AGATTGGGGCTAAGGTGGGGGATGTGGTGGAG 14374 29 100.0 32 ............................. TCCAGCAGGACATTTGTAGCGAGTCAATGCGC 14435 29 100.0 32 ............................. GTGACAGGCCAGCGCTTCGATTGGCACCCCCG 14496 29 100.0 32 ............................. TATTACAAAACCCGTGATGGTCGGACGGTCGG 14557 29 100.0 32 ............................. CGTGCGATGCATAATTCAACGAAACGCAAACG 14618 29 100.0 32 ............................. GAAGTCCGGTTGACCATAGGTTTCGCGTTCAT 14679 29 100.0 32 ............................. GGTGGCCGCGTTTTCGGGTACGGAGACACCCC 14740 29 100.0 32 ............................. CATCGCCCCTTTGCCGCCCGCATACAGGCCGG 14801 29 100.0 32 ............................. CTCAGCGAACTGATCGAGGCGATGCAGCGCAC 14862 29 100.0 32 ............................. TTGCGTGATGCATCCCCGGATACCGGCGCTGA 14923 29 100.0 32 ............................. ATGCCGGCCCTTTTCGCCGCCTCTCCTTCGCG 14984 29 100.0 32 ............................. CATCGCATCGACAACCAACCCAGCGCGCTTGT 15045 29 100.0 32 ............................. CTCCCGGACCGGATAACAGTTTTCTGGTGGGC 15106 29 100.0 32 ............................. GACAAGCTGGCGCAGGTGCAGCTAATCGCACT 15167 29 100.0 32 ............................. TAATACTCTCACGCCGCGATGCAGCATCAATC 15228 29 100.0 32 ............................. GTGGACGTGCTGTTCTGCCCCCCGGATGCTCG 15289 29 100.0 32 ............................. GCTCCATCCCTCCACAGTTTCTCCACTACGGA 15350 29 100.0 32 ............................. ACACTAATGGATTCGATGTCGGCTACGTCTCG 15411 29 100.0 32 ............................. CGGACGTCAATTCGTCAATGGTGCATCTGGCA 15472 29 100.0 32 ............................. CATAACTCCGCTAAATTCTATGAAAATGGAGA 15533 29 100.0 32 ............................. GTCTGTTCTCCGCTGCGTATTTGGCATGAGTA 15594 29 100.0 32 ............................. CAGGGACTGGCAGAACGCCGTCCATATAGCGG 15655 29 100.0 32 ............................. CGATTTGCTGAATTCGTCGCTAATGACCCCAA 15716 29 100.0 32 ............................. CCAATCGTAGCATTTCCCGGAAAAGACCAGAT 15777 29 96.6 32 ............................A CGGTCGCAGACGCAGCCGCGCCGGTCCAGACC 15838 29 100.0 32 ............................. TCAACGGTTTCCGGGACGAACGGTGGCTTCGG 15899 29 100.0 32 ............................. CGGAAATAGAGGCAGCCGAACTGGCTGCTAAA 15960 29 100.0 32 ............................. GCAACCCAATACCGGGTGAATGTCTGGGCGCT 16021 29 100.0 32 ............................. CGGCAGCAACGATCCGAAGATGCCGGATGGCT 16082 29 100.0 32 ............................. ACGTTGCCACCGGCTGGTTTTATACCACGCCC 16143 29 100.0 32 ............................. CTTTCGGCGGCGGGTCGGGAGAGGCTCTTCGC 16204 29 100.0 32 ............................. GCTTTCGACAGCTCGCTCGGGTCTTCGAGCCG 16265 29 100.0 32 ............................. AGTTGACTTTCCTGCGCCTTTCTCCCCAGTCA 16326 29 100.0 32 ............................. AACCCGAGCCGCTTCGGATAGCCGGGCACTTT 16387 29 96.6 32 ............................C GGCACGGTGGGCAGCGAGCCGGTGACGATCTC 16448 29 100.0 32 ............................. GCTCTCTTTAACACTAAGGGAGCTAGGTTGGC 16509 29 100.0 32 ............................. ACGGTCAGGCTTCCTCAACCAGATCAGCATCG 16570 29 100.0 32 ............................. GACCGCGTGTCAGCGGATCGGCGAAGAGCAGC 16631 29 100.0 32 ............................. GGCGCGCGCAACCGGGACTACCTGACTTCTGA 16692 29 100.0 32 ............................. CAGTCATCAGTTGGCGGAGAACAGGCGGATGG 16753 29 100.0 32 ............................. AACGCCAACTACACGGGTGGTGGTCTGAACAC 16814 29 100.0 32 ............................. GTGCGCGCCGGTGAGAGGGCGCTGTTTCGGGA 16875 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 71 29 99.8 32 CCGTTCCCCGCTCGCGCGGGGATGAACCG # Left flank : CTCCTGTCGAAGATCATCCCCGGCATCGAGGCCGTGCTCGAGGCGGGCGAACTTCCCCGCCCCGATCCGCCACCGGAGGCGCTCGGCCCCGCCTTTCCCGACCAGGCCTCCGGTGATGAGGGCCACCGCGGATGATGGTGGTGGTGGTGACAAACGCCCCGCCGCGGCTGAGAGGGCGGCTCGCCGCCTGGTTGCTGGAGGTGCGCGCCGGGGTCTATGTCGGCGACTATTCCGCCCGGACGCGCGAGATGATCTGGGGCCAGGTCATCTCCTATATCGACGAAGGCGATGCGGTGATGGTCTGGCGCGCACAGACCGACCAGGGTTTCGACTTCCTGACAACGGGCCGGAACCGGCGGATGCCGGTGGATTTCGACGGGCTGAAGCTGGTGAGCTTTCGCCCGCGTGATACCGAAAGCTGAGCGGCGAAAGAGGCCTTAGGCATCGGTGCGTTCTTTGACAATCGAATAGTTTTGATGAATCAAATGTCTGCAGGAAGA # Right flank : GCTGGGGACGTCGTCGTTCCGAAGGGATATGCGGTGGCGCCTGTCGATTTCGAAAAGGATCAGACGGTGAAGGTCACCCCTTGCTGACCGGGCTCTTTATCCAAAAGCAGAATTATACGGTGGGTCTGGCCAGGGTGGCGTCGGACGAGGCGTATTCCTGCCAGCTGGGGTCATGCTGGGCCTCACTCTGCTAATTCTGGGGAGGACGTAGTGCAGAATTCGCGATCTTGGGAAGCCGTTCAGCCAACCCCTATGCAGCTTGGGCAAGGCGCGCGTCGCGGCTGTCGGTTACGATTCCGCTACCTCGGGGAGACGTCCCGCAGGTACCGCCCATTAGGTCTAGAAGCTTCCGAACCACGTTCCCAGCAGGATCACGGCGATCAGAGCCAGCAATGCGCCAATGACCGCGACCATGACGACATCGCGATAGCTCTGCCGGGCTGTGACGCCGCAGACCGACAGCAGCGTTACCACAGCGCCGCTATGAGGGAGGCTGTCGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGTTCCCCGCTCGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCTCGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.60,-12.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [2-2] Score: 0/0.41 # AT richness analysis in flanks prediction: F [58.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //