Array 1 49072-50994 **** Predicted by CRISPRDetect 2.4 *** >NZ_SKBH01000001.1 Lactobacillus helveticus strain TMW 12281 seq1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 49072 29 100.0 32 ............................. AAACCTCTGTTTTTTCTTGTAGTACAGAAAAG 49133 29 100.0 32 ............................. GTAATATCCAAGAAATCAAAAATAAGTTATGA 49194 29 100.0 32 ............................. GTAAGACCGGTTCCAATTGAAAAAATACAGGC 49255 29 96.6 32 ............................C AGAGTTAGGCAAGCAAAGCCAGTAGCGCTTAA 49316 29 96.6 32 ............................C GATCATAACTTTCATCTGTTCGAATCCCAATT 49377 29 96.6 32 ............................C ATGCATCCTTAAAAGCAAAAAGGTCATAATAG 49438 29 100.0 32 ............................. AGTCCATAGTGTCAACGACTTTAAACTTAAGG 49499 29 96.6 32 ............................C CACCTACAAATTGAATCATGCAGTCACCTTCT 49560 29 100.0 32 ............................. AAGGAATGTAAAAAATTAGGCTATGAAGTAAA 49621 29 100.0 32 ............................. GAGACAGTCAATGCTTATCCTATCTATGATTG 49682 29 100.0 32 ............................. GCCTTTGGCTTGTTTCTTGCGCCAGTCACCCA 49743 29 100.0 32 ............................. CAGGCAAAGGAATTCATGCGATTTTCAAAGGC 49804 29 96.6 32 ............................C ATCATCAAGGGTCAAAACGCCATCTTGTACTA 49865 29 100.0 32 ............................. GCTATTAAAGTCTGGACTATCTAATGTTTGAG 49926 29 100.0 32 ............................. CTGCATTAGATTGACGATTGCATAAATTTCAA 49987 29 100.0 33 ............................. AAACCAGATGCACCAGCTAGCTATAACGCCACA 50049 29 96.6 32 ......................C...... GCAGGTTATCAAAGAAGCGGGATACAAGCCAT 50110 29 96.6 33 ............................C TTGCAATGCTGGATTTCTAAAACCAATGGAGAA 50172 29 96.6 32 ............................C TTGCTGCGGAACTGGCTTCTTTAGCTCTGCCG 50233 29 96.6 32 ............................C CACTCTGCTAGCGTGACACGGGCAAGAGAAGA 50294 29 96.6 32 ............................C AACCCCAGTAGAAATGGAGCTAGTACACTAAG 50355 29 100.0 32 ............................. TTGTAAAAAGATATTGGACTAAGAAAAGGAGT 50416 29 96.6 32 ............................C TACAAAGAATGGCTACAAAGCATTAATGATGA 50477 29 100.0 32 ............................. TTCTTTACTGATATAATTTTACTTATTTTTTA 50538 29 96.6 32 ............................C AAGGCGGTAGTATTGAAAACTTAATGCATATT 50599 29 96.6 32 ............................C TGTGGTTATCGTGTCTCGTTGATCTTTTATCA 50660 29 96.6 32 ............................C TAGTGGCATTACTGAAAATGTAATGTCTTGGG 50721 29 96.6 32 ............................C ATATAAAAATGATGAAAGAATAGACGGCTATG 50782 29 100.0 33 ............................. TGATGGATATAGTCAATACACTATAGTTAAAGA 50844 29 96.6 32 ............................C AACAAGTTCAACGGTCCAATCGTCAGATATTA 50905 29 100.0 33 ............................. TAGAGAATATCAAAAGAAGCATCCCAAAAAGCG 50967 28 79.3 0 .....................-CA.C.AA | ========== ====== ====== ====== ============================= ================================= ================== 32 29 97.7 32 GTATTCTCCACGTATGTGGAGGTGATCCT # Left flank : AGTGATATCCCTTTTTAGCATGATGATCAACTTGAGTTAAAGCAGCATCCTTATAGATAGTAGCAATGTGCTTTAAGCGAATGATCTTAGTATTAGATGAGAGATAATCGCTCTTATTGAAAGCTGGAGCTTTCTTTTCTGTAGTAGAACTTTGAGACTGATTAGAGTTCTGTACTACTTGAGTATTTGATTGAGCATTTGATTGAGCATTGCTAACAGCATCGGCTTGAACGTGATTAGTAGAAACAATTCCTGCACCAAGCAAAACTGCCACGATAGCTGTGTTCCACTTTGTCTTTTTCAACATATATTTTCTCCTCCATAATTTTTGGAAATTCATTGGTTATTTTACTCGTGTTTTAGAAGTTTTTAAATTAGGAAGGAAGAATTTAAAATGAGTAGAAGATATAAATAAAAAAGAATAAAATAAATAGGATGAAACTGAATAAATTTTAGTTTTCATAAAATTGAAATGGCTCAATGATAAGGGATCTTTTAGT # Right flank : AAAACAGGACTAACTCAGCCAGATTAGTCCTATTTTTCATCTATATTAAAATATTTCTTCGCTGCATCGCTCATGCGATCAGGCGTCCAGACCGGATACCAAACAAATTCAACATCAACATTTTTTACTTCCGGCACTTTTTTAACTGCCTGAGTAATGCTATCAATTAGGTAGCCAGTTAACGGACAAGTAGGGGTAGTCAAAGTCATATTGATTAAACAGATTCCATCTTTGTCCAGATCGATTTCATAAATTAGACCTAAATTGACTACATCAACATTCAATTCTGGATCGATAACTGTCGCCAATTGATTGATAATATCGTTTTTAATTGTTTCACCGTCACGCATTTTGTCACGCATCCTTGCCAAAAATTTTAGCTTTGATTGCTTGGCCGGTTGGAGTACCGGCTAAGCCGCCGATTCCGGTCTCACGCAGGGATGCTGGCATTTGATGACCAACTTTTTTCATAGCATCGATACATTCGTCGGCTGGGATCA # Questionable array : NO Score: 5.84 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCTCCACGTATGTGGAGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.40,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //