Array 1 4353889-4351239 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP069821.1 Klebsiella pneumoniae strain FDAARGOS_1326 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 4353888 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 4353827 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 4353766 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 4353705 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 4353643 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 4353582 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 4353521 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 4353460 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 4353399 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 4353338 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 4353277 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 4353216 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 4353155 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 4353094 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 4353033 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 4352972 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 4352911 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 4352850 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 4352789 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 4352728 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 4352667 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 4352606 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 4352545 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 4352484 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 4352423 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 4352362 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 4352301 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 4352240 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 4352179 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 4352118 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 4352057 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 4351996 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 4351935 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 4351874 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 4351813 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 4351752 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 4351691 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 4351630 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 4351569 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 4351508 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 4351447 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 4351386 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 4351325 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 4351267 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //