Array 1 1854542-1849266 **** Predicted by CRISPRDetect 2.4 *** >NZ_JXBL01000001.1 Geobacter soli strain GSS01 Scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1854541 29 100.0 32 ............................. ATGTTTTTCAGGTCGCTCCGCAGATACACGAT 1854480 29 100.0 32 ............................. CGAAATACCCCGCTGGATAAAGGTGAGATCGT 1854419 29 100.0 32 ............................. GTCGGCGTCGGTCATTCCTGCTGCCTCTTCTC 1854358 29 100.0 32 ............................. TCCGCCGGTTGCGTGCGGGATATGCTGGAGAG 1854297 29 100.0 32 ............................. ACCCCGGCATGTGGGAAAAGACGGTTACATCA 1854236 29 100.0 32 ............................. AGAGCAAAGCTAATGCCCGACTGATTGCTGCC 1854175 29 100.0 32 ............................. AATGAACAGTCCGCCCTGGTGCTGCTGCCGTG 1854114 29 100.0 32 ............................. TCACATGCCCATCATGTGAAGGCAGAGGCTGC 1854053 29 100.0 32 ............................. CTGATGCTCCCGCTTGAGCAGAATGAAGCGGT 1853992 29 100.0 32 ............................. CTCACTCAATGACCTGGTACTGCCCGGTATAT 1853931 29 100.0 32 ............................. GCCGACCGCGAGATGTACCTGCCGCTGCTGGC 1853870 29 100.0 32 ............................. TTTGAAGCGTGAATTTCCGTGTGAACGGTGGT 1853809 29 100.0 32 ............................. TCGAAATCGAGCACGCCAAGCGGATCGTGTAT 1853748 29 100.0 32 ............................. AAAATCAGCGCCTACGTGCTCCACTTCGCCTC 1853687 29 100.0 32 ............................. ACCGTCGAGATACCCACCGACGACAAGGGCCG 1853626 29 100.0 32 ............................. CGTTCCGGCGCGCTGCTGGTCCAGGTTGGCCA 1853565 29 100.0 32 ............................. CCACGGCGCCGGAAATACTCCATGGCCTGTTC 1853504 29 100.0 32 ............................. CGATCCTCACCGTGGGCGGCAAATCGTGGGAG 1853443 29 100.0 32 ............................. ACGGGATAACACTAATTGCCGAGGAGCGACGC 1853382 29 100.0 32 ............................. TCAGGTCGGTGCGAGACGGACATGAGCGGGAA 1853321 29 100.0 32 ............................. ATGAAAGATCCGCTCCCCCACGGCGCCGCCGA 1853260 29 100.0 32 ............................. ATGGATGTATCGGCCTGGATGAACTTTGCACA 1853199 29 100.0 32 ............................. ATGAAAGATCCGCTCCCGATGAACTTTGCACA 1853138 29 100.0 32 ............................. ATGAAAGATCCGCTCCCCCACGGCGCCGCCGA 1853077 29 100.0 32 ............................. GGCGATGCCGGACTGGTCGTTCATACGGAACA 1853016 29 100.0 32 ............................. AACAGCCCGAGCGAATCGTCAATGTCAACATC 1852955 29 100.0 32 ............................. AGCGGCGGCGGCATTTACGGATCGTTCAACCG 1852894 29 100.0 32 ............................. AAAAACCGCCGCCGGGAAACGTGAAGGGTTGA 1852833 29 100.0 32 ............................. CGCAACACGTCATACGCCGCCTTCTCGGCCAG 1852772 29 100.0 32 ............................. ACGCCCTTGCTAGCTTCCTGAAGGCCCGGCTC 1852711 29 100.0 32 ............................. CGGCAGCGGCATATGCCCTCGCGCTCAAACGT 1852650 29 100.0 32 ............................. GGCGGCAGTTCCGGCATCCTCTCCGCCATTAT 1852589 29 100.0 32 ............................. ACGTTGATCTGGACCGGGGAAAACTCGATATC 1852528 29 100.0 32 ............................. AAAATTGTTCTGCTCACCCAAGGCGGGCGACA 1852467 29 100.0 32 ............................. GCTTTGTTACCGTACCGCTCTTTCATCTCGGC 1852406 29 100.0 32 ............................. AAAATCAACGCCGGCACCACCGGAGTGTACCT 1852345 29 100.0 32 ............................. GGCGATGCCGGACTGGTCGTTCATACGGAACA 1852284 29 100.0 32 ............................. GGTGGTACCTGCCGTGGCGATAGGCGCCCGCA 1852223 29 100.0 32 ............................. CACCTGAGCCCGACTTACCAGGTTATTCCCCA 1852162 29 100.0 32 ............................. ATATACCTCTCTTTTTCAGCGGGAAAAGATTC 1852101 29 100.0 32 ............................. CATAGCGCCGAAACCATGCACCGGATACTGTC 1852040 29 100.0 32 ............................. CCACACCGGGGCCGCTCCGGACGTGGCATCCT 1851979 29 100.0 32 ............................. TTTTTTAGTTTCAGGGGTCATGGCAACCTCTT 1851918 29 100.0 32 ............................. CTCACTCAATGACCTGGTACTGCCCGGTATAT 1851857 29 100.0 32 ............................. ACCACCGAACAACTCACCGACACCGAGAAGAA 1851796 29 100.0 32 ............................. CTACGTCAAAACTGTTTACGATGCCCTCAATG 1851735 29 100.0 32 ............................. AATTACATTGCCGAGGTGGCAGGTCTGAAGAT 1851674 29 100.0 32 ............................. ACGGCCCCATATGGGAAGACCTCAACTCCTCC 1851613 29 100.0 32 ............................. ACATGATTCCTCCTTGTATTTTAGCGGCGTTC 1851552 29 100.0 32 ............................. AAACGGTCATGCATAAGCCCTCTGCGTTGTTT 1851491 29 100.0 32 ............................. ATTGATCGGGTGATCTGGTTCTGCCCGGTATC 1851430 29 100.0 32 ............................. CCGGAAAGGGTGGCACCGCCGGCAGTGTAACC 1851369 29 100.0 32 ............................. AAAACCCGCGGAATAGAGTCGAGGGTTTCAAT 1851308 29 100.0 32 ............................. TACATGGGGTGGCGGGGGCTCAGGAGCTGGTG 1851247 29 100.0 32 ............................. ACCCAGGGGCCCCATATCCGGGCGTTCCAGTT 1851186 29 100.0 32 ............................. TTCGGGGAACTTAGTCCAACCAGTCACCTTGC 1851125 29 100.0 32 ............................. GCCATAGCGCAACAGAACATTACCATTGCCAC 1851064 29 100.0 32 ............................. TCCGAGTGCACCTGTGGCGGGCGCGCTCACAC 1851003 29 100.0 32 ............................. TCAACAGCCACCCCATTGCCCCCTTGGCCACC 1850942 29 100.0 32 ............................. CGTTCCGCCAACTGGATAGGAAAATACAGGAG 1850881 29 100.0 32 ............................. ACCAAAATCGAGTTAGTCGGTATTGCTCTTTC 1850820 29 100.0 32 ............................. AACGCCCGCGAGCGCCAGGCCGCCTTCACCGC 1850759 29 100.0 32 ............................. ACGAAGCCAGCCCGGTTATCGCCCAGGTAAAA 1850698 29 100.0 32 ............................. GGTGGGACCTCTCAGGGGAAACGCGATGAACG 1850637 29 100.0 32 ............................. AATTATCCGACTCCATGCGGACCCTGACCGAG 1850576 29 100.0 32 ............................. CCCAAGACGACCTTTTCAGCATCCGCATGACC 1850515 29 100.0 32 ............................. AACGAGTGGCTGTCGAATTTCACTGTTTTCCA 1850454 29 100.0 32 ............................. GCGGAGGACGTCGCGGCCTTTTATCGTCTCGA 1850393 29 100.0 32 ............................. GGGTATGCGATGAAACAAACTCTGACTAACGA 1850332 29 100.0 32 ............................. GGTACCCCCAGGACCTAGAGTGTAACCCCGAT 1850271 29 100.0 32 ............................. CAAGGGTCTGACCGATGAATTGATAGAACAAT 1850210 29 100.0 32 ............................. GCAGAAAACTGCAGCCCTGGAGAAGGAGCGCA 1850149 29 100.0 32 ............................. GTTTTTCGGGCCGACCGCGAGATGTACCTGCC 1850088 29 100.0 32 ............................. CAATAAACTTGTGCGCAATAAGTGCCATCAGG 1850027 29 100.0 32 ............................. CCCCTCATTTCTGAGGGGCCGCGATCTTTGAC 1849966 29 100.0 32 ............................. CTCGACGGCTGCAACGCCGTTATCACCATCGA 1849905 29 100.0 32 ............................. CCAAATCACGAGCGATTCTGCTGGGAGTACGT 1849844 29 100.0 32 ............................. CTCGGCATGGACCCTGACGAGGTTTTGAGAAT 1849783 29 100.0 32 ............................. GGGTACAAACGCAACGAAGGCCTCGACCTCAA 1849722 29 100.0 32 ............................. ATCGAGGATCTGTTCGTCGGTGGTGGTGCCAT 1849661 29 100.0 33 ............................. AGCACCGGCGTGGTCCGGGTAAACGTGGCAAAC 1849599 29 100.0 32 ............................. GCCCTGGCCGACCGGATGGTGCAGATCGATGC 1849538 29 100.0 32 ............................. AAATCGTAACCATCAACCACGTGAGGGGTGGG 1849477 29 100.0 32 ............................. CGGTACAGCATACCCGAAGGGGCGACGGTGGT 1849416 29 100.0 32 ............................. AGGGAATTGGAGTCATCGCTCCAGGACTATGC 1849355 29 100.0 32 ............................. CCGTTATGCCACATCAATCATGCGCCAGTTGT 1849294 29 75.9 0 ............CAT.........CGGA. | ========== ====== ====== ====== ============================= ================================= ================== 87 29 99.7 32 GTGTTCCCCGCATGCGCGGGGATGAACCG # Left flank : AAATTCTGCACCGGATTATTCCCACTATCGAACAGGTACTTGCGGCCGGTGGCATGGCGGTGCCCACGCCGCCGCCCGAATCGGTCGAAGCCGCAATTCCGAACAAGGAGGGGATCGGCGATGCTGGTCATCGTGGTTGAGAATGCGCCGCCGAGGCTGCGCGGCCGGCTGGCTCTCTGGCTGCTTGAAGTGCGGGCCGGAGTCTACGTGGGCAAAGTCTCGCGTCGGGTGCGGGAGATGATCTGGAATACCATCGTGCAGGGGATTGACGACGGTAACGCCGTCATGGCTTGGAGTACCAACACAGAGTCGGGTTTCGACTTCCTAACCCTCGGCGCCAATCGGCGAATTCCTGTGGAGATGGATGGAATCAAGCTGGTGTCATTCCTGCCGGAGAATGGAGCGCAGCAGGCTGCAGAACCATGACGAATCCGGTGAGAAAAGTTGGTAGGTTTGAGCTGTTTGGAAATCGCATGTGAATTCAATGAAGTAGAGGAAGT # Right flank : TTCTAGGGCTTGTGTCCACAGGTCGGGAGGGATGGCTTGGAGCCTGACGATGCATGTCTGCTTCTGGTGGCTCCATTCATTTCTGCAACGTGTAGTTACGGTGGCGCTCTTTGGAAACAAGAAGACGGCCCCCAGCATCGGGAGCCGTCTTCTTGTTGTTCAAGTCCGCGCGTCTACGGACGAGTTGTCGCTTCCTACCTGATCGTCAGGTTGTTGACGACGAGCGCGCCGTTGGTGATGGTGAGGACCCCTTGCAGGGTCGTCATGCCGGTGCTGGTGCCGAAGAGCGCATCGTACCCGCCGCGGAACGTTATGGTGCCGGTCTTGTTGAGGTTGACTGCAGGTTCGGTGAACAGGATCCCGAAGGCCTGGATGGTGTTGCCCGATGCTGCTGCAGTGAAGGCAGCCGCCAGGGTCGGATAGTAGATGGTGTTGATCCGGACCGGGTTGGTGGCTGCCGCGACGCCGGTGCCGCTCAGGTTGATGTTCGGCACGGGGGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCATGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCATGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //