Array 1 2643745-2640743 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP058601.1 Haloterrigena sp. YPL8 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 2643744 30 100.0 35 .............................. CTACGACGGCGTCGCACCGGGATCGAACCTCTATG 2643679 30 100.0 37 .............................. GTCGACATAGGTCACGATCGCCCGGCGCTGTTCGGGC 2643612 30 100.0 34 .............................. AAACACACGCCGGATACCCATCAAGATGACTGAT 2643548 30 100.0 37 .............................. GGCGGGCCTTTGCTATCCGCAATCACGTCTGTCGGGG 2643481 30 100.0 38 .............................. TTGCGCGCGAGCCACCAGAACCCCAGTCCAAGAGGGGA 2643413 30 100.0 36 .............................. GTCCTGATAACTTTCAGATCCATAGTGTATCAGATC 2643347 30 100.0 36 .............................. GACCGTCAGATCAACCGTATCCCGGAACGTGTCGAC 2643281 30 100.0 35 .............................. GATTGATGTTTGACCGTTCCCCACTGGTTGCCATC 2643216 30 100.0 36 .............................. GTCCGCTACCGTCGCGGAGATGGCGATATCGCCATT 2643150 30 100.0 38 .............................. CCCCTGAAATATAGTTGATGACCCATAGTTTAGTTGTT 2643082 30 100.0 36 .............................. CTAGATTTCCGGTGTTGACGCTAGCCAAACATCCGG 2643016 30 100.0 37 .............................. GATCGCCTCTGGTGCCGCTATCGGGCTGTTCACAACC 2642949 30 100.0 35 .............................. AAACTCTGGCAGAAAGGCATGCTCGTGGCGGAGTG 2642884 30 100.0 35 .............................. TTACATTACGACGCGGCATAGCCGGATATGAACCC 2642819 30 100.0 36 .............................. TTCACGGAAGACGAGATTAGAAGTATCGTCCAGACT 2642753 30 100.0 33 .............................. CCCATCTGCTCGAGCCCGATTCAAAACACTATC 2642690 30 100.0 35 .............................. GGTCTAAGATTGACTCTCTGACTGAACGAATCCAG 2642625 30 100.0 37 .............................. TTTCGTAAAGAACACGTAGTAATGAAAGTGAGTGAAA 2642558 30 100.0 37 .............................. AAACTCGACTACAGTTACCGTCTCGTTCGGGGTCCAG 2642491 30 100.0 36 .............................. CGACGACACACCTGCAGCGTCCACCAAAGACTTCGT 2642425 30 100.0 40 .............................. TCCATGGATTGTTTCGTGAATAGACCATGGTTTTATGAAT 2642355 30 100.0 36 .............................. CCTACGTACCAGTGTGTTGTAGTCATGATTTAGACG 2642289 30 100.0 36 .............................. ATCTGGCCCTGGAAGGTATCCGTCTCAATAGCAACC 2642223 30 100.0 36 .............................. TCCGAAAGAATCCACACAATGACTGTTGTAGCAGCA 2642157 30 100.0 37 .............................. GGCCGGTTGCGGATGATCCCGCCATAGGTCATGTGGC 2642090 30 100.0 34 .............................. TCCGAACTCGTAAACGCTGCAAAGCGTGGCGACG 2642026 30 100.0 35 .............................. AGCGGGCCGCGGGGAATCCTCATGTCGGCGATGTT 2641961 30 100.0 33 .............................. CCCGCCAGCGTAGCCGGTCATTTCGGACCAGCG 2641898 30 100.0 33 .............................. CCCGCCAGCGTAGCCGGTCATTTCGGACCAGCG 2641835 30 100.0 36 .............................. AATGGTACGTGAATTACCGGAGGTGGTACGATGAGT 2641769 30 100.0 36 .............................. GTCGCGAGTTGGCGGCGTGCTGACCAGCCCGTTCGG 2641703 30 100.0 38 .............................. GGAAGAGCGAACAGATCGCTCGAGCACGAAGTACGGCG 2641635 30 100.0 36 .............................. ACCTTGGGGTACCAGAGGGCGGCCACCTCAACCTCG 2641569 30 100.0 36 .............................. TAACGCTTTGTTTTCTGTGGTCATTGTTATTATCGA 2641503 30 100.0 36 .............................. TCGCGGTCGAACCCAGTCGCCGGCGCTGCCGTGCTC 2641437 30 100.0 33 .............................. TCCATGGAAAAATACCTGCAAACGAATATTACG 2641374 30 100.0 37 .............................. ATCCCACGGAGCACCGCCGTTGCGCGCGAAGAGGAAG 2641307 30 100.0 34 .............................. GTCCTCGAGATTGTCGAGTTGCTTGCGTTCGAAC 2641243 30 100.0 37 .............................. CTCTTCGAATTCATCCGCCAAGCAGTTATTGCAGATG 2641176 30 100.0 37 .............................. TCCAGGCGTCGGTGCAAGCGGGCGTCGAGTCCCTCCT 2641109 30 100.0 37 .............................. ATGCAGAACCACCCACATCGTCCGGGTCCATCTTGCG 2641042 30 100.0 37 .............................. GCCAGGTCTCGAGCACTGTCCGGAGGACCTTGTTCGA 2640975 30 100.0 38 .............................. CCCCGGAAATCCATGTCAACGGTCGTGCCTTCAGGGTA 2640907 30 100.0 38 .............................. TTATCCCGTGTGAGGCAGACGATTCGTCTATTCTGGCC 2640839 29 93.3 37 .......................A-..... GATCGACTGGCTCGGTATATCGAGGAGGAGCGCAGGC G [2640813] 2640772 30 73.3 0 ..........G.....C.......ATCTCG | ========== ====== ====== ====== ============================== ======================================== ================== 46 30 99.3 36 GTTTCAGACGAACCCTTGTGGGGTTGAAGC # Left flank : AACGAACCGTCGACCATCCAAACTTAAATCGAAAGGTTAGCTATCAATATCTATTACGGCTCGAGGCGTATAAGCTCAAGAAGCATCTCCTTGCTGGCGAACGGTACGAACCGTTCAAGCGGTGGTGGTAAGATGTACGTGATAATGGTATACGATCTCCAGGCAGATCGAACGCACAAAGCGCTGAAACTCGGCCGACGGTATTTGACCCACGTTCAAAACTCTGTCTTGGAGGGGGAGATATCGGATGGTGATCTACAACAACTTCGTGGGGAGATCGAAGACCTGCTTGAACCCGGTGAATCGACCATCATCTATGAGCTTTCATCAGATTCTCTTCTCAATCGAACCGTCTTCGGTGAGGATCCGACAGAAGACCAGCGGTTCCTATAGTGGGAGAATATCATCGACCCCCCGGGGTCAATCGACTATTGGAGGTCGACGGAAGTTCTTTATCGTGACCTCCACACTTAGGGTCTGTAGCCCGAATACAGGGCATG # Right flank : AGACGATGCCCTTTCAGCTCGAGGTCGGAGACGAAGCCGTTCACGAACCGGGACACATCGAAGTCGAAGCGCCACTGGCGTTCCTCGAGAGCTTCCTCGATCAGCTCCCCGATGAATGTCAAAAAATGACCGAATACTGAGTCTGCCGTCCCGTACGTCGGAACCGAGCAGAGGTGTCGAGGTATCTTTGCAGCGGTCGGCGTTGCCACCGACCGCCGCGCCCATGACAGATAGTTCGGCCGACGGACACACCGTGGGAGCGTGAACACGGGCGCAGTCCGTCACCGAAGTCACGGCACACCCAACGCCGCGAGCGGAAGGGGTGGGATTCGAACGCCACGAGGCATAGTGCCGCCGCGGAACCAATGGCACCGCGGTGCTCTTCCGCTGAGCGACCCTTCCGTACTGCAAGCCGAGGACGGATTTCGTATTTGTAATCGGTCGGCTACCCGTCCGGTTGTTCGAACCCGAGTCCCGTAGGCGGTCGATACCGTCAGGTA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGAACCCTTGTGGGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.00,-6.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 2655150-2653270 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP058601.1 Haloterrigena sp. YPL8 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2655149 30 100.0 37 .............................. ATTCAGGACGTTACCAAGCCCGGCTACAGATTAGAGG 2655082 30 100.0 37 .............................. CTGTGAGGTATCGCTGGCGTTCAGATTCGCCAGTCGT 2655015 30 100.0 37 .............................. GGTCAGATACGGAGAACTCCACTCAATCACTCGGTCA 2654948 30 100.0 35 .............................. ACCAAGACCGTCCGACTCGGCGCGGATCGGATCGA 2654883 30 100.0 37 .............................. CGCTGTCCGGATACGCCATTCCGCACGTCGGACACGT 2654816 30 100.0 36 .............................. CTCAAGATTGTCGACTAACTCCCATAGTGCTTGCTC 2654750 30 100.0 37 .............................. CTGATAAGTTGGAAATGGGGACAATGGGGACTCTATC 2654683 30 100.0 35 .............................. ACTGTTCAGATACTCCCAATCCTCTTGCACCGACT 2654618 30 100.0 35 .............................. TCAGCCCATTTGGTCTGTGAGAGGCCCTGGTCTTC 2654553 30 100.0 37 .............................. CGTTTGAACTGGACGAACTCGCGTGTCATTACGGATG 2654486 30 100.0 36 .............................. ATGAATAGTACAACATGGATGGTGGGAACCGAACCC 2654420 30 100.0 36 .............................. ATCAAGAGCACCTACGACGGTATCAAGGGCATCAAC 2654354 30 100.0 37 .............................. GCCCCATTGATATCTACGTCGCTTCTAATATGCCGTA 2654287 30 100.0 37 .............................. CCATAAGGAAACTACGTCTAAGTGGTCTTTCGAAAAA 2654220 30 100.0 37 .............................. GCCCCATTGATATCTACGTCGCTTCTAATATGCCGTA 2654153 30 100.0 36 .............................. AATGAGAAGTACTATGAAATTGAAATAGCGATAAAT 2654087 30 100.0 35 .............................. CTGTATATAGGTCTTTGACCTTTCAAAAAGGCAAA 2654022 30 100.0 36 .............................. CAGAATAACAAATTCGAGAGTGCAACCGTCGAGACG 2653956 30 100.0 36 .............................. CAGAATAACAAATTCGAGAGTGCAACCGTCGAGACG 2653890 30 100.0 34 .............................. CGCCGTAAAGATATGTAATGTACGGATTTAAACC 2653826 30 100.0 35 .............................. TTGGAGTTTTTCGTACTCCTCGACTTCGGAAATTG 2653761 30 100.0 37 .............................. ACCGTCACCGCGTCACCGGCCGACCCAGTGCCGTCAC 2653694 30 100.0 37 .............................. GGGAATATTGGTCTGTCATCGACACCGTCATGTTATC 2653627 30 100.0 35 .............................. GAATATCCATGCAAGTGGTGGCGCGACTCGGACCA 2653562 30 100.0 35 .............................. CGCCAAAGCGTGATAGTGTCGCCGTCGCGCTCAAT 2653497 30 100.0 36 .............................. AGTGAATATTCGGATGGTACGACCGCTCCGGGGCCG 2653431 30 100.0 36 .............................. AGCTGGTCTCTGACCTCGAGCAAGCTCGACCGATCA 2653365 30 100.0 38 .............................. GACTGGTAGACTTATCGCGTGCGAAGCTTTTTGCGCTT 2653297 28 90.0 0 ...............--.....A....... | ========== ====== ====== ====== ============================== ====================================== ================== 29 30 99.7 36 GTTTCAGACGAACCCTTGTGGGGTTGAAGC # Left flank : ACTCTATAGTAGTCGGTGAAACGATGTCCCCACCGCTCGCACTGCTGTGGCCAGCGAGTGAGTGGTCTGCGTCACTTCTGAATCTTGGCTACGCCGGTACGCTATTCGAATCCGGCGACTCGAGCGAACGCTTCTGAAACGAGTATTCAAATCAAACCCCGATCACTCACTCGCTGGCCGCGAATTCGCATCGGGGTGTGCAATGACGTTCAACGACTACTATCGTTGACTCTCGCGCACGAAGACGTTCGCATTGAAATTTCGAGGCTGCGTTGGCCTAATCGGCAAGACTTCGAAGGCAATCCAAATCGACGATAATCAAAAACCAATTTCTCGGCCCTCTATGTAACTCAGATCGGGTCACTCTTAGATATCTAAACAGGCAAGATTTCAGCCTAATTTTCGTCGACCCCCCGGGGGAGTAGCGACTATTGGAGGTCGACGGAAAACGATTAGTACGAACGCAGTCTACAAACCCTCATAGCCTGATTTCGGGCATG # Right flank : AGAGACAACCATTCGTCGGAGGATAACTCCGCTACCTTTCACCCGAACCTCAGTTGGATTCCCGATCATCTGGTGGTCGGCGAATAGTTTTATGATGTTGCTTTTATAAATCGGAGGCATTCGGATGATTATCAGTAGGGGTGACTATTGACGGTGCGGATCATGGCTCACTTGTCTGCTCGAGCGGATACAGCCTACGACAACGCCTACCATCACAAACTTCGTGGACGATTGTGGCGTGCGCTCGAGGGGACTGCGTATGACGGCCGGCACGATTCCGGTGAGCCGCCGGGGTTCGTAATGTCGAACCCGTTTCCACCGGGGGATATGCGACACGGAGACGAGCGCAATCTGCTCGTCGCCTCGCATGATGAGGAACTTCTCGCGCACGTGGCCGAGGACCTCCTCGATGATCGTGAATTGAACATCGGCGAGATGCCGTTTCACGTCGAGGACGTGACCTCGCTCGAGCCTGACGTCGGCGAACCCGGAACCAGGGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGAACCCTTGTGGGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.00,-6.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //