Array 1 124783-124218 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CAJTHJ010000003.1 Granulicatella adiacens isolate A88, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
    124782	    36	 100.0	    30	....................................	TCACGCATCATCGCAGATAGTGCAGAACCG 	
    124716	    36	 100.0	    30	....................................	TCGATTATCCTTGGAATCAAATCGAATATG 	
    124650	    36	 100.0	    30	....................................	TCTGTGGAGGGTTTCCGTGCCAGTCTTTCT 	
    124584	    36	 100.0	    30	....................................	AAATTTTCTTGTTCAGCTTTCTTCTTTATT 	
    124518	    36	 100.0	    30	....................................	TGGTGTAAGAAAGAGAAATCTTTTAGCTCA 	
    124452	    36	 100.0	    30	....................................	ATCACCAATGGATGTACCTTCTGGGAGTAG 	
    124386	    36	 100.0	    31	....................................	ATGTCGGGCTTCCGTACCTATAAGTGGTATA	
    124319	    36	 100.0	    30	....................................	GTTAGTCTCTTCAGTCCATACAACCTTCTT 	
    124253	    36	  97.2	     0	...................................T	|                              	
==========	======	======	======	====================================	===============================	==================
         9	    36	  99.7	    30	GTTTTAGAGCTGTGTTGATTTGAATGGTTACAAAAC	                               	       

# Left flank :   TAAAGCTGTGCAGTCTGATCTATTGGATCAGCTGAACGAGAATATCGAACTAAAAAATCAGGTAGATTTGATGCTTACGCAGATCGCAAGCATTTTGGGAGTGCAATGCATAGAGAGTGAGTTGAATTTAACGTATAATGAACTTAAGATTGAACAAATTATTTCCGCATTAGAAGTCCGTGTAGACTCGGAGTCGAATACGTTGTTTGAGCAACTCTTTGAAGTACTTCAAATTTTCAAGTATCTTGTAAAGAAGAAACTTCTTATCTTTATTAATGTTGCATCTTACTTTAGTGAGGAAGAATTAGATGCTATAAAAGAGTTTATTGAGTTGAATCAAATAAATGTATTATTTATTGAGCCAAGGGGTGTGTATAACTATCCGCAGTATACCCTTGATGAAGATTTTATAATAATCAAAAATTTGTAAAAATAGTGAAAATCATTCAAATCAGTAGTCTGGCTGAGACGAGCAGCGCGATTACGAAGCCTTCTACGAG
# Right flank :  GCTTACGTGTGATGTTTGGTTATTAAACTTATAACAAGGTTAAAGTTGCTAGAATTTTTAACTGATAAATACAAATAGAAAAATAGATAAGAAATTAACTCGGAGGAAGATCATGGGACGTAAAAGTAAGTTTTATGAGGCACTAATCGAAGAAGTAGTTTATAATTCGGTATCAGATATTTGGGAGGAAGCAGTTGAAGAGTGGGAAATTTATGATGTTAAGGAGGATGAAACTCTCGAAACATCATGTATTTGTGGACATGATCACCTTAGATATCTTTTTACAATTGAAAATAAATTGAATGGAAGATTTTTATATCCGATTGGAAGCTCATGTATTAAAAAGTTTGGCCGCTGTGACTTAAAACATGAAGTTGAAGTTCAGATGCAATTGTTCCAATTGTTACATGCTGTAGAGCAAAGAAGATTTCTAGAGTTGTCTCCAGAATACTTTAGCCGAAGACTATTTGCGTATTTATTTGAAATGGGTGCGTTTAAAC

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGTTGATTTGAATGGTTACAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:66.67%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGAGCTGTGTTGATTTGAATGGTTACAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-1.90] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [71.7-51.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,5.28   Confidence: HIGH] 

# Array family : II-A [Matched known repeat from this family],   
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