Array 1 37042-37550 **** Predicted by CRISPRDetect 2.4 *** >NZ_RDOJ01000023.1 Faecalibacter macacae strain YIM 102668 Scaffold23, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 37042 47 100.0 30 ............................................... GGTTTTTCACCCAGACTCAAGCCCTTTAAA 37119 47 100.0 30 ............................................... GGGATCGACCTCCCCAAGTTACGAGTTAAG 37196 47 100.0 30 ............................................... GAGGGTCAATCTGTTGTATCAATCGTTAAG 37273 47 100.0 30 ............................................... TAACTTCATTTCGTTTCAATAACGTTAATA 37350 47 100.0 30 ............................................... AGTCGATAAGCGTCTGAACTGTATTACGGT 37427 47 100.0 30 ............................................... TAGCCTGTATATTTCATACAATCATCTCTG 37504 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 7 47 100.0 30 GTTGTAATTGCTTTAGTAAAAATACCAAATTGAAAGGAATTCACAAC # Left flank : TGTTTAACTGGAGAGCAACGAATAATTCGTTACCCAGAATTACAATGAGTTTTAGTCGTTATAATGCATATCGAATTATGTGGGTTTTAGTTTTTTTTGATTTACCTACTGAAACAAAGAAACAACGCAGTCAAGCAACTAAATTTAGAAATTATTTGTTGGATGATGGATTTGTAATGTTTCAGTTTTCAATTTATTTACGCCATTGTCCAAGCAAAGAAAATGCGGATGTCCATATAAATCGTGTGAAAAATAAATTACCCGAATATGGTAAAGTAGGTATTCTGAGCATAACAGATAAACAATTTGAATTGATGGAAATATTTTTTTCTCAAAAAGAAACTGATGTGCCTAAAGGGCCACAACAATTAGAATTATTTTAAAATAATAGAAACAAAAAAACCGATAGAATTATTAAAGTGTTCTATCGGTTTTTAAATTTTTACAATCCTAATTTGAACGCTCAATACCTTTATTTTAAAGGTCTCATCAAAGATGAG # Right flank : TAGAAACCCTAATTAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAATTGCTTTAGTAAAAATACCAAATTGAAAGGAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.34%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.70,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : NA // Array 1 1141-17 **** Predicted by CRISPRDetect 2.4 *** >NZ_RDOJ01000046.1 Faecalibacter macacae strain YIM 102668 Scaffold48, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 1140 47 100.0 30 ............................................... TGTTAACACCTTGACTTTGCAATTCTTTAA 1063 47 100.0 30 ............................................... TATCTGGCTCATTTTGTGGGTCTTCTAAAG 986 47 100.0 30 ............................................... TAACATATGACTCAGGATTAAACGCAAGTC 909 47 100.0 30 ............................................... CGTAATCACCGATAGTGAAGAACTCAGTTA 832 47 100.0 30 ............................................... ACGCTACTCATTGAAAGGCGAAAGCGATAT 755 47 100.0 29 ............................................... GAAGTTGAGAGTAAGAACAAACGTTCTTA 679 47 100.0 30 ............................................... AAGCAGGTCAAGATTTATCATGTGTTTCGC 602 47 100.0 30 ............................................... ATCCTTGTCCTACCCTCGTCGCTTGTAATA 525 47 100.0 30 ............................................... TACTCGCTGTAATAATATCCATTATTCGTT 448 47 100.0 30 ............................................... TATATTTTATAGTGTTCTCAAAAGAATAAT 371 47 100.0 30 ............................................... TGTTTGTAGGTGCGTTATTGCTTCTGATTG 294 47 100.0 30 ............................................... GGTCCCAATACAATTGTGGTGATTGGACAT 217 47 100.0 30 ............................................... AGAAATATTCGTGTATTAAAAAAATACTTG 140 47 100.0 30 ............................................... TATATCAAAGTAATTTAGATTCATAAATAA 63 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 15 47 100.0 30 GTTGTAATTGCTTTAGTAAAAATACCAAATTGAAAGGAATTCACAAC # Left flank : CTTTATTTCTTCAG # Right flank : CTAGAAACCCTAATTAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAATTGCTTTAGTAAAAATACCAAATTGAAAGGAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.34%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.50,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [20.0-16.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : NA // Array 1 16-397 **** Predicted by CRISPRDetect 2.4 *** >NZ_RDOJ01000013.1 Faecalibacter macacae strain YIM 102668 Scaffold13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ========================================================= ================== 16 47 100.0 30 ............................................... TTAATCCTCTGATTCTTCATAAACGAATTT 93 47 100.0 30 ............................................... CTGCTGCAGAATCGGCCACTACCTCACCCA 170 47 100.0 57 ............................................... TCTTGCCATTTCAAAGANNNNNNNNNNGTAAACTAAATGCTTCGTATTCGGTATTAT 274 47 100.0 30 ............................................... GCTTATGGTGAAAGCGCTAATACTGCTTTA 351 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ========================================================= ================== 5 47 100.0 37 GTTGTAATTGCTTTAGTAAAAATACCAAATTGAAAGGAATTCACAAC # Left flank : CTTTATTTCTTCAGCG # Right flank : CCAGTTGGAACATTAAAGTTTGTTGGAGTGGGTTGTAATATAGGGGATAGAACGAAAAGTATAAAAGTATATTAAATAAAAAAAGCCTGAAAACCCCGATAAATAGAAGCTTTAAAGCAAAAAAAGCCTTTTCTCCAACTCTTAACGAAAAGTATATTTATCTACATTTAACTACTATTTAATTACCTTTCTAAATGCCTTTAAATACCATTTAACGAAAGTATATACCAATATAACCTGAAATACTGCTTAAAACTACTATTATAGCGGTATTATGAAATATTAAAAGCCTTTTAGACGACTGTTTAAAGGGCTTTTTTATATTTTTTTGCGTAGATCTGCTGATGCTATATTTTATTTAAAAAAAAGATTTTGGACATACAGTTGGGCATACAGTTGGACATACAAAATAGGTTTTGAAATGTATTTTAAAAGTAGTTATAATACCTTTAAAGTGTGTAAAACGTTATTATATTAATGATAAGCATAGGGATAATACA # Questionable array : NO Score: 2.76 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.29, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAATTGCTTTAGTAAAAATACCAAATTGAAAGGAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.34%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.70,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [16.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.64 Confidence: HIGH] # Array family : NA // Array 2 39190-39699 **** Predicted by CRISPRDetect 2.4 *** >NZ_RDOJ01000013.1 Faecalibacter macacae strain YIM 102668 Scaffold13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================================ ============================= ================== 39190 48 93.8 29 TA.A............................................ GTTTACAAGGATTTTTGATTTGTTTGCTA 39267 48 100.0 29 ................................................ ATTGATCCTATGTTGGCAACGGGCCATTC 39344 48 100.0 29 ................................................ AAGAATCCGAACCAATTGAAGGCAGCATA 39421 48 100.0 29 ................................................ AATAACACTATAAAGAAAAAACACTATAC 39498 48 100.0 29 ................................................ TAAAGTAACACTTATTTAATTATAACATT 39575 48 100.0 29 ................................................ GAGAAGCATTTTTATATGCTTTAGGTTTT 39652 48 97.9 0 ...............................................T | ========== ====== ====== ====== ================================================ ============================= ================== 7 48 98.8 29 AGTTGTAATTGCTTTAGTAAAAATACCAAATTGAAAGGAATTCACAAC # Left flank : AAATCCCAATTACTATATAAAGGTAGTGATTATTAGCGGGTTTACAAAAAATTTACACTTCAAAATGCATATATTTTATGTATTATTGTGTTAAAATTAATGATATGGAATTGAAACGTTATGATTTTAAAATTTTTTGGGAATACGAGTTGAGTGATTATTGGAATTTGAATGATCATCCATTGTATATTAAATTAATTAGTAAGCGTGAAGCACCATATTTTAAGATAAGTGAACAGGATTTTGAAGGATCTACAAAAATAACAAGCTTAACTGCTTTTGTAAGGTATTACTCAGCCTTTGATTGGTTATTGGTTTCTAAAACAAAAACTGAAAAAGTCATTAAATTAACTCAGTCTATGATTAATATACCTTGGTCACCATTAAAGTAATATTAAAAGCCGTTTAAAGATGATTTAAACGGCTTTTATATTTAGGATAAGTTTTGTGATTTTATTGTACATTTCGTTTTGAAAAACTGTACATTTCGTTTTGCGGAT # Right flank : TTGGCGCAGTCGAACAATATTTAAGTAGTAAACATAAAAAAGCTGCAGAAAACATTCTGCAGCTAATATATTTAATGAATTTCAACAACTTCGGTTGTTTGTTCGTGTATTGTTGATGCACGACCTGATGGATCTTCATTCTCTTGCCATTTCGGAATCCATTTTTTTACAGTTTTCGCAGCAGCTTCACTTGGGAAATGTTTATGAAAAATCTTTCGCATATACATCGCTTCTTTCGTCGTAGGAGTATTGATTGGGAATAATGTTTCGGCTTGTTCCATTTCCTGATCAGAAATTTGTGTAGCACAATAATCTACTAACTGATCAATCCAAGAATATCCAACTCCATCAGAAAATTGTTCTTTCTGTCTCCATAATACATGTTCAGGTAACCATGGTTGTTCTTTATCATCAAATGCTTTTCTAATGATGTGTTTTTCCATTTTACCTTCGGCTCTGTTTGGTCTTTTATACGATGGATCAATTTTCATGGCAACATC # Questionable array : NO Score: 2.70 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:-0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTTGTAATTGCTTTAGTAAAAATACCAAATTGAAAGGAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.92%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.70,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : NA //