Array 1 58474-58334 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFREK010000015.1 Faecalibacterium sp. Marseille-Q4137 NODE_15_length_70335_cov_20.336170, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================== ======================================== ================== 58473 20 100.0 40 .................... GAAAACGTGCCCTGAATTTCGTGCTCTGCCTGCTCGATCA 58413 20 100.0 40 .................... GATAATCCGACTTCCATGTTCTTGACGTTCATCATACTAG 58353 20 95.0 0 ...T................ | ========== ====== ====== ====== ==================== ======================================== ================== 3 20 98.3 40 TACCATCCCCGTAAGGGGGC # Left flank : CATCCACCAGATCCCGGCACAGGCCGATCAGCGTTTCCGGGCGCTGATCCTCCGGCAGGTCGATCTGCCGCACCTGATCTTCTGCAATGCCCAGCTGCGGCAGCTCTTCCAACAGCTGCCGATAGTTGCGGGCGGTATCGGCATTTTCCTGCCGGATGGCCAGTAGCTGCACCGTGTCCCCGGGTTCAAGGGTATCCCGCATCACCTGCACGATGGGGAAACAGGTAGCCGTAGGCGCATCTGCCCGCTCCCGCTGGTACAGCATGGGGTCCAGCTTTCCCTGCAAAGGTACGGTGGTGATATAAGTCTTTAGCACAGGACAACACTCCTTTTTATAAGATCCATTATCAGCATCATACCATGAAACCGCCCCGCGCACAAGGCAGGCTGAATGAATTTATGGCCGTTCTTTTCAGCGCAAAAGCACATCATTGCAATAAAGTGAACATTTTCTAGCCTCTGGCTCTTCAGTTTTGCGATGTTTTGTGATATATTTAGTA # Right flank : AAACAAAAACAAGACAGGGGAGATGATGTCATTCTATGTACACGCTATGTACACGCTTTTCATGTGTCTCGTTGCGTTGGGTGTAATGAGCATTATTTTTAAGAAAAAGTAATTTTAAGTTTCTTGCTTAACTATCCGCATTCCATGGGCTTTTTCTCTTTGCAATGTCAAGGAGGAATGCCCTATGCTCATCAACTTTACCAATCATCCTTCTGCCCTGTGGAGTGCCGAGCAAAAGGCTGCGGCACAGGTCTACGGCAAGGTGATAGACCTTGCCTTTCCTGCCATCGACCCCGCCACCAACGAGGCCGTGCTGGACTCCCTTGCCACGGTATATACTGACCTCATCCTGCACCTTAGCCCGGATGCCGTGCTCTGTCAGGGCGAGTGTACCTTTGTGTACCGGGTGGCCCAGCGTCTGGAAGCCGCGGGCATCCCCACGCTGGCCGCCTGCTCCCGCCGCAAGAGCCAGGAGACCACCTACCCGGACGGCAGCACCC # Questionable array : NO Score: 4.27 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:-0.75, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TACCATCCCCGTAAGGGGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 62079-61795 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFREK010000015.1 Faecalibacterium sp. Marseille-Q4137 NODE_15_length_70335_cov_20.336170, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= ============================================ ================== 62078 23 91.3 36 ....T...T.............. CATCGGTAGTCTGCCCATGCTTCTTGATATCCAATG A [62075] 62018 23 91.3 44 AG..................... AGCCGGTCAATCCGCCCAGAAGCCTGCTCCATGACATTACAATT T [62016] 61950 23 100.0 44 ....................... TCGTGCGTATCCACTGCCACATCCAGCTTGTTCCCATTGTAACT 61883 23 100.0 43 ....................... AGCTTTCCACGAATATAAGCATTAGAAGCCGGATGTTGTAACT 61817 23 87.0 0 .................AA...A | ========== ====== ====== ====== ======================= ============================================ ================== 5 23 93.9 42 TATCCCCGCAAGGGGACGGAAAC # Left flank : CCGTTCATCAGCGAGTTTTTCCACTGGCTGGAGCAGAGCTTTGCTGTTCTGCACAGCGGCGAGACCTGCCGCTATCTGCCGGTGAACGATTCCGTACAGAGCAGCGAGCGTCTGACCCCGGCTCTGGGCGTGCTGGAGGAGCTGGACCTGCTCCACTTTGCCCTGCTGGGCGGCTCCAACAGCCGCCTGTACCTCTATATCAACCAGACCCAGACCCTGGAGCTGGCTGACCGCGGCTTTTACCGCAACCACCTGCTGGAGCGCATTGCCCAGCGCCACACCGATGCTGTGCGGCTGATGAGCTGGCTGTTCACCAGCGGCTTTTCCAGCGAGCAGCTCTGGGACCGCATCGAGGAATACTTCCTCGGCTTGCCCATTCAGGGCTTTGACGCCCCTTCTGCCGAATCGAGGTGATCTTTATGGCTTATCTTTTCTACTCCATTCGCGCTTCTCCGGTGTATGGTTCTTTTCTTTTGACTCAATGTGTGATATAGTAAATT # Right flank : GCACCTCTGCCACTGGCGTTTGCCAGCAGCGGAGGTGCTTTGCTTTTTCTTATATTCTATTTTACAAGTTGGGAACTGCGCCTGCCGGAATCGTCTTTGTGACAGGCAGCGCCTTGACGCCTTCCGGAACATCCGGCTTCATGGGGCGGATCTCCTGCAGATAATCGGCCACATCCTGCAGGGTCTGTTCGATGTGGGCTGTGTCCAACGGAAGAATACGGTCGCTTTGCAGACCAAAAGCCGTATCACTGGCATGGTTGATCTGGTTGCGGTACTGCATCACACGCTGGTAGAACAGTGCCGCGTCCTCGATCTGCCACCGGACCTCCGGGTCGATCACCAGCTGACCGGAAGCGAGGATCGTATCCATATAGGCATGCATTTCTTTGGAATTTGCCACACCAAACAACATATTGCCATCTGCATCGTCCTTGCTGTGGGTCAGGCGCAGATCCGTTGTATAGGGATACTCCTTTTGCATCAAAGTCAGGCGGCAGAAA # Questionable array : NO Score: 5.68 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TATCCCCGCAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,9] Score: 0.37/0.37 # Reference repeat match prediction: R [matched AATCCCCGAAAGGGGACGGAAAC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.60,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [5-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //