Array 1 65464-66829 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADCPQ010000011.1 Klebsiella pneumoniae strain KCJ3K248 NODE_11_length_67285_cov_9.438116, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 65464 29 100.0 32 ............................. GGGGCCAGCTCCCGGACGAGAAATGTGACGCC 65525 29 100.0 32 ............................. CGATTACGGAGTCGTTCACAAACCGACCACCG 65586 29 100.0 32 ............................. TCGGTTTCGAGCGCGGTGTATTCCTGCCAGGC 65647 28 89.7 32 .....-......TG............... CGATTACTGAGTCGTTCACGAACCGGCCACCA 65707 29 89.7 32 ........T...TG............... CAAAAATGCCAGGCACTGACTAAACCGCCGTC 65768 29 93.1 32 ............TG............... TGACTTTTGCGCAGCCTCAGGGCTCCGGTTTG 65829 29 100.0 32 ............................. GCACCCTCACGGATACCTTTTGCACAGTGTTA 65890 29 93.1 32 ............TG............... TTACCAATGGGGAAAAATCTTCATTTGTAACT 65951 29 96.6 32 T............................ ATAACTATCAGGGTAGATTCATGAAAAGGGTA 66012 29 93.1 32 ....C.......................C CTTAGAGAAGCAAAAACCCCACCGAGGCAGGG 66073 29 93.1 32 ............TG............... CCGAGATTGAGTAAAGCAAAGTAACGGCGGTG 66134 29 100.0 32 ............................. CAGCGTCTGAACGGACGAAACATCCCTGTTGA 66195 28 89.7 32 .....-......TC............... ATGGGCTGGCGCGACTCAAATGCCCGTTTGGC 66255 28 93.1 32 .....-......T................ CGAGCGCTCTCCTGGTAAATCGGTAGCTCGGA 66315 29 100.0 32 ............................. GCAGCGGCCTGACGATGATTGATATGAACGGC 66376 29 100.0 32 ............................. GAAAGTAGGGGCTACGCCGGAATTCCGAAGAG C [66381] 66438 29 93.1 32 ............TG............... TTACTTTTTGGCAGTTGGTAAAACACTTTTAC 66499 29 89.7 32 ............TGA.............. TTCCGGACTCCTGTTTCCGGCAGTGGATTAAA 66560 29 96.6 32 .........................A... CATTACCAGATCCGAATGGACACCCGTAATGA 66621 29 96.6 32 .............C............... TGACTTTTAAAAAAAATCAGCTGAAACAGCCG 66682 28 89.7 32 ..........-.TG............... TTCCGGACTCCTGTTTCCGGCAGTGGATTAAA 66742 28 96.6 32 .....-....................... CACTACCAGATCCGAATGGACACCCGTAATGA 66802 28 89.7 0 ..............C.......-.....A | ========== ====== ====== ====== ============================= ================================ ================== 23 29 94.9 32 GTATTCCCCCCGCATGCGGGGGTTATCGG # Left flank : GATAAAGACACCAAAGCTGAGCTTCAAATCAAAGTACGGGAGCTCGATGAAAAAATTCAGGCCCGCAAAGATCAGAAGCAGGAATCTCGCGAGTCAATTCGCCGCCCGATTGACCCGTATGAAGCGTTTATCACCGGCGCAGAACTCAGCCATCGCATGAGTATTAAAAATGCGACTGATGAGGAAGCAGGGCTTTTCATTTCTGCATTAATCCGCTTTGCAGCCGAACCACGTTTTGGCGGTCATGCGAATCATAACTGCGGTCTGGTGGAGGCTCACTGGACAGTTACGACCTGGAAGCCGGGTGAACTGGTACCAGTTACACTTGGAGAAATCGTCATCACACCGAATGGTGTTGAGATTGCCGGGGACGAGTTGTTTGCTATGGTAAAGGCATTCAATGAAAATCAATCTTTTGATTTCACTGCCCGCTAATTCCAAAAGCTGGTGGATTTTAGTAGTGCTATTTAATATTTTATAATCAACCGGTTATTTTTAGA # Right flank : CATAAAAACCGCAATGGTGGGGCTTTTGTTATGTGCCCCTACAAGCAGATGGGACTTTTTACAATCAAGGAAAGTTACTTTCTTCAGGATAACCCACATTCTGTCATATCTTGCAGGTTGCAATCAGAAAAGGCCTTACGTCGATAAATTCATGCCTTGAGCTGGTAAGGAAGTATGACGTTATAACTCTGCATTTCTGGTTGATTAAGGTAGGGCGGCATTCCTGCTTTAAAAACAATCACTAATTTTGAACGGTAGTCGTCTTGATCCCAACTGCTACCTGATGGACTAGGCACCTGCAAAGAACCAATTTATACTGTTTATATATACAGTGTGCGCCGGGAGACCGGTAGAGATCAAGGGGTGAAAGTCCCCGACCATTGAAGGACCAGCAATCCACAAGGTCCCCGAGTCATGCGTTGCATACCGCGAGGTATGGGGCGAAGCGTTGACAGG # Questionable array : NO Score: 5.44 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.43, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCCCGCATGCGGGGGTTATCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [10-18] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //