Array 1 249230-253035 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJBR01000003.1 Klebsiella pneumoniae strain 44 NODE_3_length_437152_cov_51.406835, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 249230 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 249289 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 249350 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 249411 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 249472 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 249533 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 249594 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 249655 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 249716 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 249777 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 249838 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 249899 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 249960 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 250021 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 250082 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 250143 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 250204 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 250265 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 250326 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 250387 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 250448 29 100.0 10 ............................. ACATAGCGCC Deletion [250487] 250487 22 51.7 0 CGA.A.G.A...........T.------- - Deletion [250502] 250509 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 250570 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 250631 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 250692 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 250753 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 250814 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 250875 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 250936 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 250997 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 251058 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 251119 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 251180 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 251241 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 251302 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 251363 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 251424 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 251485 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 251546 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 251607 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 251668 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 251729 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 251790 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 251851 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 251912 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 251973 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 252034 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 252095 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 252156 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 252217 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 252278 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 252339 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 252400 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 252461 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 252522 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 252583 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 252644 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 252705 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 252766 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 252827 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 252888 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 252949 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 253007 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 64 29 98.5 31 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.06, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //