Array 1 714399-710069 **** Predicted by CRISPRDetect 2.4 *** >NZ_VJXQ01000002.1 Halobellus captivus strain ZY21 scaffold2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================================================================ ================== 714398 30 100.0 36 .............................. ACAGTCCCACCCCCATAGGTCATTCAAACCCACCCT 714332 30 100.0 35 .............................. GTATCCTCATCGGGAGCGAGGATCCCGCAGGGGTT 714267 30 100.0 37 .............................. GAGTCTGTTTAAATTCGCCGTCTGAGACTCTGATATT 714200 30 100.0 34 .............................. TCAATCGACTGGATAACAGAGCCGATGCACCGCA 714136 30 100.0 42 .............................. ATTCGCTTTTCTTCGAGTTTCTTTTTCATCCGTNNNNNNNNN 714064 30 96.7 38 N............................. ACGGCGGCTCGGGGAGGTTGATCTCGAATGAGCGAACG 713996 30 100.0 34 .............................. CGTCGATCTGCCGGGCTCAACGTCGAACGTCCTC 713932 30 100.0 34 .............................. CGGGGTGGACGGTGCGCTCGCGGATCAGCTGGAA 713868 30 100.0 36 .............................. CGAGATGTTCGAACCGTCGAAGTCGACTATCGACGG 713802 30 100.0 41 .............................. GCTCGGCCAGTAGCCGCTCGCCGCCGTCGGTCNNNNNNNNN 713731 30 96.7 37 N............................. CCGTCTGTGGCGCCGGTGAGTGTGCCGACGACCACCG 713664 30 100.0 40 .............................. GCTCATAGCGCCCTCTCAATACGTCGCTCAAGNNNNNNNN 713594 30 93.3 37 NN............................ GATCTTCTCCCACCGCCGGTGGCAGTCTCGACACGAA 713527 30 100.0 34 .............................. CGGGGTGGACGGTGCGCTCGCGGATCAGCTGGAG 713463 30 100.0 34 .............................. GCGACTTCGCTATCCAACAGGATAACGACACCCG 713399 30 100.0 34 .............................. CGGGGTGGACGGTGCGCTCGCGGATCAGCTGGAT 713335 30 100.0 35 .............................. GCGGCCGCGACTTTCAGCTCCGCGGGTGACGTGAC 713270 30 100.0 33 .............................. CCAGCATCGACGTGGACTTTCCCAGTGTTGGAA 713207 30 100.0 36 .............................. CGCGGCATCCCCGAGGACGGTCATCATCTGTTTGAT 713141 30 100.0 35 .............................. CCACTCCTCGGTGCCTGCCGCCGCATCGACCGGAA 713076 30 100.0 36 .............................. CGCGGCCGCGACTTTCAGCTCCGCGGGTGACGTGAC 713010 30 100.0 36 .............................. CGCGGCCGCGACTTTCAGCTCCGCGGGTGACGTGAG 712944 30 100.0 34 .............................. GCTCAAATGCTTGGGTTGGGCGACTCGTTTAGAC 712880 30 100.0 34 .............................. GAAACGTCGGGATCTTCGACCCTGCGGACGAATC 712816 30 100.0 35 .............................. TCCACCGGGACGATGTTGAACCCATACCCCAAATC 712751 30 100.0 35 .............................. CCACTCGCCGATGTCTTGCGATACCAGCGACTAAT 712686 30 96.7 37 ..C........................... CGGCGGGGCGCTGACTCTCGTCAGGAAACAGCAGGAC 712619 30 100.0 36 .............................. CATAGTCGTTGACACGCGGATATGGGTCGAAAGTGT 712553 30 100.0 35 .............................. GGGCCATTCCCTTTAGAGGCGGGCGAACAGAACGA 712488 30 100.0 33 .............................. CCCGTCGCGGTCGTCGTCGAGCCGTTGTTTGGT 712425 30 100.0 35 .............................. GTATCCTCATCGGGAGCGAGGATCCCGCAGGGGTT 712360 30 100.0 36 .............................. GCCGATCGGTACGAACACGACGCTCTCTCTTGGTTG 712294 30 100.0 35 .............................. CCGATCCGCCCGTGTTCTCAACGTAGGCGCTTACC 712229 30 100.0 40 .............................. CACTCGGGAACCCCCCGCCGTCGACCACGGNNNNNNNNNN 712159 30 100.0 36 .............................. TGTCGAAGGGGTTGCCGGGCGGTCGGTGGCGTAAAC 712093 30 100.0 36 .............................. TCGCGTCCATCACGCGCTCGTCGTCACGCCACCCGC 712027 30 100.0 34 .............................. TGCACACTTTTCAGAACCGCGGACATACTGGGGT 711963 30 100.0 37 .............................. GCGGTCGCGACGACGACGGGAGCAACGTGGATACGGT 711896 30 100.0 34 .............................. GCGAGTGGGTCGCACCCGGCGGCATCCACGATCC 711832 30 100.0 37 .............................. TCGGTCCTGAGTGACGGCTAACGGTGGATTACTGCCC 711765 30 100.0 35 .............................. GTATCCTCATCGGGAGCGAGGATCCCGCAGGGGGT 711700 30 100.0 38 .............................. TCGTTGAGAATCCCGTTGATGGAAAGCGACNNNNNNNN 711632 30 93.3 36 NN............................ GCGCGTCGTTGGCAGATTCGGCGCGAGCGTAAAGCC 711566 30 100.0 36 .............................. CGAGTTCAACGCGAGCGAACCGGCGAATATCACGTT 711500 30 100.0 36 .............................. TTGCTCGATCTCCTCTTTCCGCTCTCCAACAGGGCA 711434 30 100.0 41 .............................. GTCGTTACTCATCTGTCGTTACTCCCATTTGCNNNNNNNNN 711363 30 96.7 35 N............................. AATTCCCAATGGCGGTGACAATATCGGGCCGATCC 711298 30 100.0 35 .............................. GATCAGAGCGCCCGCGAGTGGTCCGACGAAAACAC 711233 30 100.0 40 .............................. TAGGCGCTCATACCCGCGAAAAGAAGGCCGAGNNNNNNNN 711163 30 93.3 39 NN............................ TCGAGGCGCGCTTGTCGGACGGCACACGCATCNNNNNNN 711094 30 90.0 92 NNN........................... TCGGGTAATTATCACGGACTTCGCGGGCGACGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 710972 30 96.7 40 N............................. CAGGAAGCTGGTGTGACTGCCTGCGGTGGACTNNNNNNNN 710902 30 93.3 36 NN............................ CAACGCCGACGAAGTGAACGAGTCCCATCCGGCGCG 710836 30 100.0 36 .............................. GCGCATATGTCCGATTGTAACGCCGTCGTCTATCAC 710770 30 100.0 38 .............................. TCGTCTTTGATCCGCCCGCCCATTTACTCGNNNNNNNN 710702 30 93.3 43 NN............................ CGCCGCTGCCACTGTCCGCGCCGATGGTTGACNNNNNNNNNNN 710629 30 100.0 37 .............................. TGAGTAACGACACCGTCATCATCACGTCGAATCCCGG 710562 30 100.0 40 .............................. ACTGGGTGACTATGGGGTGGGGCTATGAGCANNNNNNNNN 710492 30 96.7 36 N............................. GACGTCCAACGAAAGACGAATATCGAAGCGGAGTAA 710426 30 100.0 36 .............................. CGAGTCGGACGGGGCGTTCTACGTCGTCGACGAGAG 710360 30 100.0 36 .............................. GCGCATATGTCCGATTGTAACGCCGTCGTCTATCAA 710294 30 100.0 36 .............................. CGAGTCGGACGGGGCGTTCTACGTCGTCGACGAGTT 710228 30 100.0 34 .............................. TCAACGCGTCACGCTCCGGCTCGAACAGGATGTG 710164 30 100.0 36 .............................. GCGCATATGTCCGATTGTAACGCCGTCGTCTATCAC 710098 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ============================================================================================ ================== 65 30 99.0 37 CCTTCAACCCATCAAGGGTCCTTCTGAAAG # Left flank : TCNNNNNNNNNNTCAACCCATCAAGGGTCCTTCTGAAAGTCCACGGGGCAATGCTTGCCTCGAAGACCGGCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCAACCCATCAAGGGTCCTTCTGAAAGACGATCCGCGCCCAGACCGACACGGTGACGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCAACCCATCAAGGGTCCTTCTGAAAGGCCTCGCTGACGCACTCGGCCTCAAGCGGCGTCAG # Right flank : TATGACGAATATTGGCACTATATGGCCTAATAACCTTGGTTTGCGGATGGAGTTTTCGTTGACCCCTGATTATGGGATAACCCCCGGGGGGTCGACGAAACTTATGTGAACTTGCTTCCCGGCTCGTCTGCGTCACCGAGGACGGTGCACTCAACTGAGGCAGATATATTAGATTCGAATATATAGACCGAGTCGTCTGAGTCAAGGATGTTCTGGATCTCGTTTTGGATTGTGACAAGTTGCCCCTCCGTGATGTCGCCGTAGAAAACGGAGTACTGGATGTGTTCCAGATGTTTCCGCAGAAGTTTTCGATAAATCCGTGTCCGTTTGGCTGGCACGTCATACGTGACGAGGACGAACATCGTCACCACCACCGTTCTGTGGGACGGTACGGCTCGCCAGTGAGGATATGTTTTTTCAGCGAATAAACGTCCGTCTGGACTAGCGTCTTGTAGCTCACCTTCCGCTTCAATCGGGGGTGTTCCACGGTTTGGTCGAGC # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.06, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTCAACCCATCAAGGGTCCTTCTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.70,-4.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,0.78 Confidence: LOW] # Array family : NA // Array 2 714860-716224 **** Predicted by CRISPRDetect 2.4 *** >NZ_VJXQ01000002.1 Halobellus captivus strain ZY21 scaffold2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================= ================== 714860 29 93.1 37 ...........................NN NNNNNNNNGACGTCTCGGCGGGCGCGGGCGAAGCGGG 714926 29 100.0 36 ............................. GGGATCGTACTCCTCGCGGTCGTCGTCGAGCGTGTC 714991 29 100.0 37 ............................. GCCGGTCGACGACCTCCCCTCGTGGGTGGTTCGAGCA 715057 29 100.0 41 ............................. NNNNNNNNNNCGATGAATTTCTCACCGTCCGAGAGCGGTTC 715127 29 100.0 37 ............................. GCGGTCTTCACGCCCGGTGAGGGTTATCGTTGGGTTG 715193 29 100.0 35 ............................. GGCTCTTGTTCGCTCGCGATGTAGTCGAAGTGATT 715257 29 100.0 36 ............................. GTGTGGTGAGCCGTGCGAACCCCAGGTTTTACCCGA 715322 29 93.1 40 ...........................NN NNNNNNNNCTCGACGCCACCACCCCAGACCTCGCTGTCGA 715391 29 100.0 35 ............................. GAACCCGCCGGTCGCCCAGCGACAGCACCCGGTCG 715455 29 100.0 37 ............................. GCGGGGGTCGCCGACGTCGCTCGCGAGCGGTAGTGCG 715521 29 100.0 37 ............................. GGAGGTGTTTGGATGAGCTGACCGGCGACGACGTCGA 715587 29 100.0 38 ............................. GGCGGATCCTCGATAAGAAAACCGAGGACACGATCCCG 715654 29 96.6 45 ............................N NNNNNNNNNTACTGACACGATCCAAGATAGTGAAGCGAAAGTCGT 715728 29 100.0 37 ............................. TGGGAAAAGCCGCTCCTCCACGCGCTGTCGCAGGGGA 715794 29 100.0 39 ............................. CAATGTAGCCCGCTGTCGCGGCGACAGTCGTTTCCACAA 715862 29 100.0 35 ............................. CAGCTCCGCCGCGAGTCGTTCGGCGAACTCCGCCG 715926 29 89.7 44 ..........................NNN NNNNNNNTACGAGGCCGTCACGATCGACTTCGAGGCCGAGTTCG 715999 29 100.0 36 ............................. CAGAGGGTCCTGTTTTGGTTCGTGCCAGTCCCGGCT 716064 29 100.0 37 ............................. CGATTCCCGCTGATAATGTGGCAGTCTACACACGGAA 716130 29 100.0 37 ............................. CACGTGGGATACAACGACTGTTCCAACCAGAGCGGTG 716196 29 93.1 0 .......................C....A | ========== ====== ====== ====== ============================= ============================================= ================== 21 29 98.4 38 CTTTCAGAAGGACCCTTGATGGGTTGAAG # Left flank : TGGGACTGTCTTTCAGAAGGACCCTTGATGGGTTGAAGGCTGACGCCGCTTGAGGCCGAGTGCGTCAGCGAGGCCTTTCAGAAGGACCCTTGATGGGTTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGTCACCGTGTCGGTCTGGGCGCGGATCGTCTTTCAGAAGGACCCTTGATGGGTTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGCCGGTCTTCGAGGCAAGCATTGCCCCGTGGA # Right flank : AGCCAATATTGAGCGTTAACATTGGTTTTCCGTTTCAGAACCTTCTATAAGTGCAAACTGCCGCCCCAAGGCGCGCCGAGTCAGGCGCGCCGACCAACCACTGTTTCTGCTGGACATCTGCCGAGCGAAGCGAGGCAGTAGTTTAGTCAGGTGGCTCCTTAGCCACACCCCTAACGGAGAATCGGGTACCCCGCCTCGGAATTAGCAAAACCAGTTCGAGGTTGTTGAGTCACACACAAGATCAACACTCGAAGCGACGCTATTCGGCTCTAAAACAAGCAAGAATATCCGCTAAAAAGAGCAATCGATAGTGATGCCTCTCACGAGTCGCCGCGCTAGCCGGGGGTCCCGAGCGCGGCCGCGAAGTATTCCGGCGCGTATCGTTTGCCGTCGACCGTCGTAACTACAGGGTCAAACTCAAAGGCGAACTGCCGAAGTTGTTCACCGGTTACCTCCGCCCACCGCCGAGCCCCCTCTCGGAGGAGCTGACGAGCCTCTTC # Questionable array : NO Score: 3.18 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCAGAAGGACCCTTGATGGGTTGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.40,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [20.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //