Array 1 21119-17489 **** Predicted by CRISPRDetect 2.4 *** >NZ_CACVCG010000062.1 Magnetospirillum sp. UT-4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 21118 31 100.0 36 ............................... TTCGACGATGGCGGGAGTGTCGCTGTAGCCGAACCG 21051 31 100.0 34 ............................... AATTAGCCAGCACCAGGCGGCGCGACGGCAGAAG 20986 31 100.0 34 ............................... CTTCCAGGTCAGGGCCTCGAAGGCGGCCTGGTTG 20921 31 100.0 34 ............................... AACAGCTTCTCGTCTGAGAGGAACCCGCCATGAC 20856 31 100.0 34 ............................... CCTAAGTCTGACCTGAGCCCCACGCGATTACGCG 20791 31 100.0 34 ............................... CTCAGCAAGTTGACAAGGCCGACGCCGACTGAAA 20726 31 100.0 35 ............................... TTCCAGGCTGCGCCGGCCTCGAAAGACCCGCCGCC 20660 31 100.0 34 ............................... TGGGCGGGCGGCTGCTGGCGCTGCTGCTGCTGGC 20595 31 100.0 34 ............................... GTTGCGCAATCGTTAACCGCGCCAGTGCCTATAG 20530 31 100.0 34 ............................... ATCGTGAATCCAAGCCACCTGCCTTACGTGTTCG 20465 31 100.0 35 ............................... CGCTTGGCGGCGGGCCTGGTCGTCACCGGCGGCTC 20399 31 100.0 35 ............................... AAGATTTCCTGTGTCGCCTTAAACGAAACGTTCTC 20333 31 100.0 33 ............................... ATGAACCTCACGTTCATGGAAGCCCCGGTCTTC 20269 31 100.0 36 ............................... GACAACAATTCCCGGGCCGGGCGCAGCGGCATCGGC 20202 31 100.0 34 ............................... GACCCCAAGATTGTCCGCAAGATTGTCGGCCTGC 20137 31 100.0 36 ............................... TTTGAGGCCGGCCATCTGGGTGGCGAATTCGTGGGT 20070 31 100.0 35 ............................... CGACGCCCGCGTGCTGCACTTCCAGGACGCCGACG 20004 31 100.0 35 ............................... TCGGTGGCGCCGGCCCACGGGTCGGGCCCGCCGCG 19938 31 100.0 33 ............................... TTTTGGTGGGGTTGCGTCATGGCTAGAGGTCGC 19874 31 100.0 34 ............................... TGAATCTGCTCCAGGCCCGAAATCACCACGTTGC 19809 31 100.0 34 ............................... ATCTCGATCCACACCTCAACCATCTCGAAGGGCG 19744 31 100.0 33 ............................... AATAACGCGCCGGCGATATGACTGGCGACGCCA 19680 31 100.0 33 ............................... TCGACGGTCATGGCGAGGAGCTTGCGGATCTTG 19616 31 100.0 36 ............................... GTCAGCTACGAACCGGCGCTTGCGCCTGTGGACCTG 19549 31 100.0 34 ............................... CTGGCGGCTTGTCGTGTAACACTGGAGATTATGG 19484 31 100.0 33 ............................... ACGTCGACTCCGCAGGCGGCGGAGCCGAACAGG 19420 31 100.0 34 ............................... AGCAGCATCGCCACATAGGGGATGCGCAGCACCT 19355 31 100.0 35 ............................... CGACAGGCTTGCCCACACCGGCTTGACCTCGCCGG 19289 31 100.0 36 ............................... GTCGTCAATCGGGGAGGTGGCTGGGCTGAAAGCCTC 19222 31 100.0 34 ............................... TGCCTGGTGCGCAGCATTTCGGCAATGAGGGGGC 19157 31 100.0 34 ............................... CCGGGCGCGTCGACTCAAGCGCCGCTTGGAACGC 19092 31 100.0 33 ............................... CTGTTCCGGCACTTCGTAGAAATCGGCCCACGC 19028 31 100.0 36 ............................... ACCAACACCCGCCTGTACCGGCAGCGCAAGGCGCAG 18961 31 100.0 36 ............................... CTGGCCACCACCTTGAAGGTGGCCCCGAACTTCGAT 18894 31 100.0 34 ............................... GTGGAGATGGTGGCGTCTAGGCCAACTGATAGCG 18829 31 100.0 33 ............................... GCCCCGAGGTGGCGAACGCCGTCGCGGTCGGCT 18765 31 100.0 34 ............................... GTTTGCGGCTGACGGCACAAAGCCTGTGACATTT 18700 31 100.0 35 ............................... AGGTATGGATGGGGTTCTACGACCGCGCCATGGCC 18634 31 100.0 34 ............................... TCGCCAGCGGCGACAATACCGGAGCCACCACGCT 18569 31 100.0 34 ............................... ATCTTGACGAGCATGACTTCGCGGCAGTGATCGG 18504 31 100.0 34 ............................... ACCCAGCCGGGTGATGCTGCGGCCGATGCGGTGC 18439 31 100.0 35 ............................... ACGATACGGCGGACAAACTCCGCCACCTTTTGCAG 18373 31 100.0 34 ............................... GTCATCGGCACCGGCCCCCTGACGGCGGGCAAGT 18308 31 100.0 35 ............................... TGATGGCCGCCGCGTCATCCGCCTCGTCCGGCGCC 18242 31 100.0 35 ............................... TTGAACAGGTACAGCCAGGCCACCGCGCGGGCCAG 18176 31 100.0 34 ............................... ATGTTTTGCAGGATGGTCACGGCGGAAGCATCGC 18111 31 100.0 35 ............................... CACGTCACCTCGCCGAGGTAAAGTCGGTTGTGCAA 18045 31 100.0 36 ............................... CAGCGCCACGGATACGACATGGCCCCCGGCGCCGCG 17978 31 100.0 35 ............................... ATTGGAATCGACAGCCTGCCGATGAACGCGGACGC 17912 31 100.0 36 ............................... CTTGCCGCCGCCGGCGCCGAGCGACGGCCCGGCATT 17845 31 100.0 36 ............................... ATTTCCTGTCTCCGCCCCTAGTCTCCGGTGAGGCGC 17778 31 100.0 35 ............................... ATTTCAGCGCCTGCGGATACTTGATAGTAACCAGC 17712 31 100.0 33 ............................... CGTTCAGCAGGGTTGTCTACCATGCCGTGTCGC 17648 31 100.0 34 ............................... TCCCGCCAGGGAGAGACGGCGGACCAGATGAAGC 17583 31 100.0 33 ............................... ATTGCCGCGTCGGTCGTGTTGTAGTAGATCGCC 17519 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ==================================== ================== 56 31 100.0 34 GTCGCCCCCTCACGGGGGCGTGGATTGAAAC # Left flank : TTTACCCGCCGCTGATCTGGGCCTGACGGCGGTGCTGGTGGTGGTCTCCTACGACGTCAATACCGAGGATGCGGCGGGCCGCAAGCGCCTGCGCAAGGTCGCCAAGGCCTGCCAGGATTACGGCCAGCGAGTCCAGTTCTCGGTGTTCGAATGCGAGGTCAGCCCGGCCCGCTGGGTGGAACTGCGCGCCCGCCTGCTGGCCATCGTCGACCCAAGCAAGGACTCGCTGCGCTTCTACAACCTGGGCGCCGACGGCCAGCGCCGCGTCGAGCACATCGGCAACCGCAAGCCCCTGGACCTGGACGGCCCGCTGCTGCTGTAGCCGCGAACCCCAAGCGCCCCGGAAAAACCCGCCAGGTTCGCGGCAGCCCCGACAACCCGGAAATCCGCCATTCCCGAGACGGCCGACGCCAACGCCACCCCCCATACCGACCGCTCCACCCCGCAATCGCGCCAACCCCAGATTTTGCCGAATTCCTGCAAGATGTTATGCTGGAGGA # Right flank : CGGTCCGAGCGGGCCTGCTATTTGAAGCGCCCGCGGTCCAGGCGATGGATCACCTCCGGCGTAACCTGTCCGAAAGACAGGATTTCCTTGCCGCTGTGGTCCTTCATGAACTCCTCGGCCTCGGCGTGGGTGAGGAACGGCACCAGTTCGTGGCCCATGGGGCCGAGCACGTCCGAGCCGATGACGTAGAAGGCGTCACGGGCGTCGATGCGGGTGACCGCGTAATAGTCGGTCACCGCCACCGTGGCCACGTCGTCGGGTCGGTGGCCGGCCACGTATTGCTTCGGCGAGGCCAGGAACTTGAACAGGTCCTTGGCGCCGTCGAAGTGATGGGCGTGACCGTCCTTGTACAGCACCGTCGCCACCCATTCGGGGTATTTGGCGACGAACATGCCGCAGACCGGACAGACGGTGTTGGGCGCCGGCGGCGGGGTCACCACCTCGCCCGCTTGCGCGGGCGCCGCCAGCAGCAGGAGCGCAAGCAAAGCGAGGCGGCGGAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCTCACGGGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCTCACGGGCGCGTGGATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-7.30,-7.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [30.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 10049-10505 **** Predicted by CRISPRDetect 2.4 *** >NZ_CACVCG010000082.1 Magnetospirillum sp. UT-4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================== ================== 10049 37 100.0 32 ..................................... TCGTGGTGCTGAGCAATCAGTGCGTCCAGCAG 10118 37 100.0 33 ..................................... ATCGGCCCAGGGCTGCACCCCCTCGGCGACCGC 10188 37 100.0 32 ..................................... GCTCGGCTCGCAGCCAGGTTCATTTCGGCCAG 10257 37 100.0 34 ..................................... CCGTCAAGCGCCAGCCAATAGGGCTCGCGCGTCG 10328 37 100.0 34 ..................................... ATCCGGCCCGGGCAGCTTCGCCACGCGGTCCCGC 10399 37 100.0 33 ..................................... CCGTCAGACCAGCCGGGAGGGAGGTGATCTGGG 10469 37 97.3 0 ....G................................ | ========== ====== ====== ====== ===================================== ================================== ================== 7 37 99.6 33 GCCTAGGCCGCATCCGCGAATGGGAGCGGATTGAGAC # Left flank : TGACCATCGACGATCCGGGCCCGTTCCTCGCCGCCTTCGAGACCCGCATGGGCGGCACCGCCTGGAGGCGGAGCGCCACCATCCGCGACTTCCTGGCCGCCTGCCGGCCCGGCGAGGCCGCCGATCTCGAATACATGACCGGGCCGGGACCGTTCGCCAAACTGAAGAAGGCGGTCAAGCCCCTGACCGGAGACACCCCTCCCTGTCCCGCCTATGCCCACCCGCGCCTGCTGCCGGCTTGTCCCGAATCCGCCGCCCCCCGAACCACCCGCCCGCCGCCTCCTCAAGGGCGGCGGCGGTAGGAGGGTTGGCGACGCCCCCCGGGCGGCCTCACCCGTCAGAACCCCGTGGAATTTTTGTACCATGTTGAATTCTAAACTGTATTTGTCACTTTTTGCGGAACGATGCGTTTGCGCGCCGGAATTCTCAGGAACTGTCCACAGACCAGGTGGAAACCGTCCCTCTTTCAACAGCCTTGACAGCAGCCTCCAACGGGGGGA # Right flank : CTAGCCCTGACCGACGGCCCTGAACTTCCATTCCGACCCGGCGCCCCGTTGCGGCGAAATCCGGCTGGCGCTACTCTCGCGGCGGTGGCCGGCGCAACGGGGGGCGGGATGACGGATCGGCGGGCTTCGGCCATCATCGTCGGCGAGTTCCGGGAGATCCTGGTGTGGCCGCTGCGGCTGGACCTGGATTGCCGGGCGGGAAAGGGCGAGGTCGCCGCGGGCCATGCCGCGACCATCGGCGCCCTTGACGCCGACCGCCGGTGGGAGCCGGTCCAACGGCTGCTGGGTCACCTCGCCCCCGGCGGGGCGACGACGTCCGAGGCCGAATACAAGGAATTCGTCTACTTCCACCCGTTCGTCCGCCGGTTCCTGTACGGCGAGGGCGACGCGGCGCCGATGCGGCTGTACCGCCGCCTGGGCCTGCGCGCGGTGGAATTGTGCCTGTGCAACGACGTGACCGGCCCGTTCCGGGTACGGCTGGCGGTCGATCGCTGCAATCT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTAGGCCGCATCCGCGAATGGGAGCGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.80,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA //