Array 1 691-59 **** Predicted by CRISPRDetect 2.4 *** >NZ_LDNZ01000029.1 Geobacillus sp. T6 NODE_201_contig30, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 690 30 100.0 35 .............................. GTAGAAACGGTGTGTGCAACGCCCTAGCGCCGCAC 625 30 100.0 35 .............................. TAATTCGATTGACTGAAGAAACGAAAAATAAGTTT 560 30 100.0 39 .............................. TTGAAGGTACGTGGAAAGACATGTCTCCTAAAAGTGGTG 491 30 100.0 36 .............................. ACGTATAAATTCCCCAACCAGAAAACCGTTGGGAAG 425 30 100.0 36 .............................. CCAACAGCGAAACGTCTTCATACACCTGTTTCGCCC 359 30 100.0 40 .............................. TCACCTACAAGCGCTCATCGTGACATACTCCCGCCACCTA 289 30 100.0 36 .............................. AATTTTTCACAGAACGAAGAACCGAAGTAAGCAAAA 223 30 100.0 37 .............................. CTTTCTCGACTTTTGCCAACTCTGCCGCCAACCAATC 156 30 100.0 38 .............................. AATTGGTGTTCTTCCGCATATCATGCACCGATCGCCGA 88 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 10 30 100.0 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : AACGTGCCCGCCTTGAGCGCCAGAAAATCGAGCAGGAAATGCTGGAGCGGAAGAGACGCGAGGAAGAAGAACGAGCAAGGCTGGCCCTCCTCTCCCCCGAAGAACGGCTTGTGGCCGAAATTGAGCGGCTGACTGACAGCGAAACGGATAGGCAGCGAAGCAAGGATAGCCTTTACCAACAGGTGATCGAGCAGCAAAACAAACAAGCCGCCGTTGCGTTGCAGGCGTATTGGAAACGCATCAGAGAATGGGGAAAAGCCGTTAGCAAAAAGCAAAAGCAAAAAATGGACAAACTTCAACAACTGTTGGAGGAAAAGTGAGGGTCTTGCGATTGTCGTCGACCCCCAATCGTGCAAAAAAACCGGGGGATCGACGACAATGTTTTTTTGTGCCGAAATCCTACAGCCATCACGGCTGAGGTTGTATTGACAGAATTTTTGAAACGTGATATTCTAGAAACAACCCAAAGGAAAAAGCTTGATTTGATGCGCATGGTTTGG # Right flank : CTATTCCGAAATCAACATCTATCTCAATGGATGTTTGTTTTTATCGTATCTATGAGGGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.37 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 8035-7736 **** Predicted by CRISPRDetect 2.4 *** >NZ_LDNZ01000028.1 Geobacillus sp. T6 NODE_201_contig29, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 8034 30 100.0 35 .............................. CGCCTGTAGGCGTCGAAGTGGGGGTTTCTTGTCGA 7969 30 100.0 40 .............................. AAATCAAATCTCCAAGCCGTATAATGATGGATGAGGTTGG 7899 30 100.0 38 .............................. TCGCAAACGCTCAAACAATGTTAAAGATTTAGGATTAC 7831 30 100.0 36 .............................. TCGGCCTCAAAACGTTTCTTGAGATACTGATGTTAG 7765 30 76.7 0 .C...C..........C...AA.....CC. | ========== ====== ====== ====== ============================== ======================================== ================== 5 30 95.3 38 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : GGGTGCATGAAC # Right flank : TCTCCAACTCCCGTCTCCCACCCATATTTGAATCACGCTTTCATCCGCACAATTTTTCTCTTTGTGTGCTGTCTTCGCTGGCAATATGGAGAAGACCCGCCATCTTCCCTTGATCCTCGCCACGCGCAAAACTTCTTCTTCGTTCTGTTTTTCTCGCGGCAGCTTTGTTCGATGCGCTATACTTGATAGAAGGAGCAACATTTGTTTGCTTCCAGATGGGCGTTTGTTTTTGCCTTTTCACGATGGGTATAGCCAACAAAGGGAAGGGGAACGGTGATGCGGTGCAAGCTTCGCGATCTCGGTTTTTCCATCGGCACGCTTCCGACAGGGGAGCGCAATCAAATCACCGATGTGCCCGGGGTAAGGGTGGGGCACGTGACGATTCGGGAAGAGATGGACGAACGGACGGTGATCCGCACCGGGGTGACGGCGGTGCTGCCGCACGGGGGCAATTCGTTTTTGGAGAAAGTGCCTGCAGCTTGTTTTGTGTTGAACGGGTT # Questionable array : NO Score: 8.82 # Score Detail : 1:0, 2:3, 3:3, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-10.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,9.78 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 45611-44260 **** Predicted by CRISPRDetect 2.4 *** >NZ_LDNZ01000071.1 Geobacillus sp. T6 NODE_201_contig74, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 45610 30 100.0 35 .............................. CCTGCAAATGTTCGCGTTTCCTTTTATCGATCCTC 45545 30 100.0 35 .............................. CGATGTGCTGGATGCGTTTGAAAAGGCGGGTGCGC 45480 30 100.0 36 .............................. TCGCTGCAACCAACCGAATGGCACAAGCGACGATTC 45414 30 100.0 37 .............................. GGACTGTCGTTCGGTTTTTATCTTGTTTTGCTGCAAT 45347 30 100.0 35 .............................. TGGCTTTAATGTTGGTGTTGGTGTTGTTCACTACC 45282 30 100.0 39 .............................. ATGGGAAAGAAGTTCGTTTCAAGTCGAATGCGGCAACAC 45213 30 100.0 36 .............................. CTCTTCGATCGTGCGCAAACCTTGTGTGATAATGAC 45147 30 100.0 36 .............................. CAATGGGCTGACTGTGAATGGGGGCACGGCTAATGT 45081 30 100.0 37 .............................. ACCTATCTTTCTTTCCCGGTCGGTTCGGAACCCTGAC 45014 30 100.0 38 .............................. AATTCCTTGACGTTTCCCGTTGTCTTTTTCATACAAAC 44946 30 100.0 35 .............................. TATATAAGGTCCACATGTCGCGTCCCAGCCGCCGC 44881 30 100.0 34 .............................. TTCGGACCGGCTATGCTTGAATCCAAAGGCGTTT 44817 30 100.0 37 .............................. TGGCAATATGGTGCGATTCCAAAAGCTTGGGAAGACA 44750 30 100.0 35 .............................. CCAAATCTTCGTATTCTTCTGGCACTTCACACTTC 44685 30 100.0 34 .............................. TCGAGGAACACGACAGTATCAGCTCGGTCGAGTG 44621 30 100.0 37 .............................. TGGGGAACGGCTTTACAATCAATCTCGACGATAAGCC 44554 30 100.0 38 .............................. CTTGAAACGATTCTAACTGTTTGATGCGATATTCTTTC 44486 30 100.0 35 .............................. ATAGATGAAGCAGGGATTATGTTTAATTCTCGCGA 44421 30 100.0 35 .............................. TATGATTACTTTAAACATCGCAACCCAGAAGCATT 44356 30 100.0 38 .............................. GGTTGAACCGCTCTTTCTTCATGGTAGGTGTGTCTTTT 44288 29 90.0 0 ...................T.-.......G | ========== ====== ====== ====== ============================== ======================================= ================== 21 30 99.5 36 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : TGTTCTTGCATGAAGCCACTCTCCTTTGGTATAGCTGGCCCCGCCTTCATTATGCAGATGACCCGCCAAGCAGACGATTTAGATGTCGTCTCAAGTTTGCCTAGCACCAAAGGAATGGAACAGGGATTATAGCAAGCAAGGCGGAAAGAAGTAAAACAGGGGAGGAAAAAGGTCGTCAAAAAAGAATCGAGGGAAGGACGCTCGACGTGGCGAAGAGAATGCTGGTGAAGGACTGGAATATCGACGCTATCAACGAACTGACCGGACTGCTGGTTGAAAAAACAAACGAGTGAAGAAGCAAACCATTCTCCTCAACCTTATATTCCCATTGTCGTCGACCCCCAATCGCGCAAAAACCCCTGGGGATCGACGACAGTGGTTTCGGGCTCCCTAAACCTACAGCCATCGATGACGAACCTTATTGACAGAATTTTTGAAATCTGTTATTCTGAAAGCAGCGCTAGATCGAAATGTTTGATACAACAAGCATTTTTGGGGGG # Right flank : TCCGTTGTACCCTTTGCGAAGATTGATGATGTATGGCGAAGCGGCATCTGTTGTCTATGACCGCAGAGGCGTGGTGTCGCGCTTGCTTGACCCATTGATAGCGAATCCATTTGATAGAAAAGGACAACGCTCGATCACGAGGCGTGTTTCTGGCCGCCATGCTTCCCCGTCTGGCTTTCGAAGCATCAAAACAAAAAAAGACCCGCCCGCTTGTCTTGGCAAACGGACAGGCCTTTTCGTCGCGTTTTTCGTTTCCTCTTGCTCGACGCCTTGTCGATTACGCTCTTGCCATGCCGATCGAGGCGTCTGGCGTTTTGTAGGATGAAGCGTCGTTGTTTTCGTCTTGATGGTTGTCGCTTGGCGTCGTCGAATGGTCGTCAGCCGATGGTTGTTCATTCGCTGGGTTTTCGTCTGTCGGCGCTGTTTCGTCACTTGGGATCAATTCTTTTTCTTTGCTCGTGGCGGCGCGATCGCTTCCCGTTTTGTCTTCCGCTTTGTCG # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 1048-1551 **** Predicted by CRISPRDetect 2.4 *** >NZ_LDNZ01000077.1 Geobacillus sp. T6 NODE_201_contig80, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1048 30 100.0 37 .............................. AAGAACAAAACGAATTGTATGCACAAGGTCGCACGAA 1115 30 100.0 37 .............................. TGGCAATAGGTTTTTCCGCCGACGACTCCCCATCCGT 1182 30 100.0 39 .............................. GTATTGTGTTTCGCTGCAATTTGTGACAACGTATCGCCT 1251 30 100.0 36 .............................. GACGGCATCTGAACCACCTCTCTTTGACTAAAAAAT 1317 30 100.0 39 .............................. GTAGGTGGAGGATGAGAGGATGCAGACTCCGGCTGTCCA 1386 30 100.0 39 .............................. GCTGCATTTGAAAGCTCTTGAGTAATTTTCAACTTGTTT 1455 30 100.0 37 .............................. TATCCGCTCATTGATGACCCACATTCCGGACATTTGA 1522 30 93.3 0 ...............G....A......... | ========== ====== ====== ====== ============================== ======================================= ================== 8 30 99.2 38 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : AAATCACCCAGATTGTGATGGGGATGTCTGCTCGGACGAGATGGGAGGAAATATGGAAAGGATCGCTCATTAATGTAATTATGCAGCAACTTAAACATGTTGATGTGCTTGTTGTATCTGACAGATAGAGAAGAGGGGCATCTTTGATCATAGTTCCAAAAGAAGACTCCCGTTCGCAATTCAAGCAATAAGCGGAAGATGAATGTCGGCTGGCGCCAGCCAAAACGTATGATAAAATCAATGTGCATTGCGTACAGGCTGTTGACGGACTTAAGCGGCTAAGCAGCGCACGAGACGAGAGGAAATTCAAAGTGCACGCTGTGCATAGCATTGTCGTCGACCTCCAATCGTGCAAAAACCCCGGGGGATCGACGACAATCTTTTTACACACTTCAAGCCTACAGCCATCGTACATGAACACGATTGACAGAATTTTTGGATTATGGTATTCTGAAAATAACTTTGGAGCAAAAAGATTGATATATCAAGTGCTTTCTGGG # Right flank : CCTTCGTGTTTTGTGCGAACGATCGTCGCAATAAACGCTTTTCATCACACCGTAAGCAACTCCATGGAGCGCACATAGGTTTAAATCTGTGCGGTGGAGAGAGGTTAAGAGTTGGCGAAGATGACTGAAAGAGATGAATCAGCATTCGCGGGCTATGTCTGTGCGATACCGGCGATCCGCTTCTGCCGTTTGTTTTAGGCAGGAGTTTTTTATTGTTATACAGCCGCTTTATGTCCATCCCGAATTGTCGTTCCAGGAAGAGAAAACGGCGCAATTTGTGTACGAGACGCTGCAATCATTCGGCCATCTTGAGTTGTCGCGGCCGACGAAAACGAGCGTCATGGCGCGGCTCATTGGCCAACAGCCAGGCCGGGTCGTCGCCATTCGCGCTGATATGGACGCATTGCCGATTCAAGAGGAAAACACGTTTGAGTTTGCCTCAAAAAACCCAGGCGTGATGCATGCGTGCGGACATGACGGCCATACGGCGATGCTTCTCG # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 1-686 **** Predicted by CRISPRDetect 2.4 *** >NZ_LDNZ01000267.1 Geobacillus sp. T6 NODE_34_length_589, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 1 37 100.0 36 ..................................... TCATAAAAAACAACATTTAAGCGAGATTCCGGCGAA 74 37 100.0 34 ..................................... AGTCAAAAAATTTTTTAGCGCCTTTGGCGCGGCG 145 37 100.0 35 ..................................... TAGCATCCACCGTGTTTATATGCTCCACAATCCGC 217 37 100.0 35 ..................................... GTGAATCGGGAAGCGTGGAGCAAGACGCGGATCTC 289 37 100.0 38 ..................................... TTGTTGTTGCTCCCGTAAATCAGCGATAGTAGGAGGAA 364 37 100.0 36 ..................................... AGATTAACGGAATGCAAGAACTGTTACGTCAGCTTG 437 37 100.0 35 ..................................... TGATTTAGGTGTAGCGTAAATTTCATGCCCCAGCT 509 37 100.0 33 ..................................... TCCAGAATGGCAACGAATGAGGGAGTACATCTA 579 37 100.0 34 ..................................... AATCTGAGTAGATATGAGCATCAGTTAGTCGCTG 650 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 10 37 100.0 36 GTTGCACCCGGCTATTAAGCCGGGTGAGGATTGAAAC # Left flank : | # Right flank : T # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCACCCGGCTATTAAGCCGGGTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-15.20,-15.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-1.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : NA // Array 1 8583-12788 **** Predicted by CRISPRDetect 2.4 *** >NZ_LDNZ01000113.1 Geobacillus sp. T6 NODE_201_contig117, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 8583 37 100.0 34 ..................................... TTCAACGAGCTGGTATGACACGCTCATGCTCTGT 8654 37 100.0 34 ..................................... TGGGTTGAAGCCTTTGGAAACTCTGGTATCAAGT 8725 37 100.0 35 ..................................... CTCATTAAGCGAGGATATTCAGCCAAGCCAACCAT 8797 37 100.0 34 ..................................... TGAGTTTAGTGAGGTGAGACTTTATCATCGCAAC 8868 37 100.0 34 ..................................... CCAAACAAAGCTGCTCCATAGTCACCCACAGTCG 8939 37 100.0 33 ..................................... CTCATCGTAGCAATCCTCAAGCCCCCAGCCCAT 9009 37 100.0 33 ..................................... CCTTATAGTAAGATTGAACTGTAATCGAAAACC 9079 37 100.0 34 ..................................... GGACAGAAACAAGCTCTCACAGAAGCCATCCTTG 9150 37 100.0 34 ..................................... CCCCTACAGGGTTAAAGGCTTTTGGCATTATGTC 9221 37 100.0 33 ..................................... TTGAAGGCGTTTAGTTTCTCATCCAGCTTATCT 9291 37 100.0 34 ..................................... AAAAAGAGATCGAGCGCACAAAAAAGGGCCGCAA 9362 37 100.0 36 ..................................... TTTGAGCGTTTTGCCTTTATGCTTCCCGAACGTCAA 9435 37 100.0 33 ..................................... TAGTAACACCCCGGCACTACATACAGAGGACAA 9505 37 100.0 34 ..................................... ATAGGAACCTCGCGAAAAATCAGCAACCGTTCGC 9576 37 100.0 35 ..................................... TTCTTTCAATGCGTGTTGCGAAATGGTGGGCGACG 9648 37 100.0 35 ..................................... TCATGGTGGGGGAGCTCCCCCACACCCCCCGTCGC 9720 37 100.0 34 ..................................... TCGACAACTCTCCATGCACGCTCTAACGTCTTAA 9791 37 100.0 36 ..................................... TAAACTTCCTGCTGACTTTATGTCTGCCGCTGTAAC 9864 37 100.0 35 ..................................... AGTTTCCGCAGTGGAATTTGGATCAACCCAATCGC 9936 37 100.0 38 ..................................... ACAATTGCGCCGATGGATTTGCCTAAAAACCTGTCAAC 10011 37 100.0 36 ..................................... AGATGCTACTAGGCGTGACAAGTGAGTACGAGGTCA 10084 37 100.0 35 ..................................... AGAGCGAATGAAATCTTGCATGTCCTCGATGTCCT 10156 37 100.0 35 ..................................... ATATCATCGTAAGCGACAGGTGAAACGCCTTGAAT 10228 37 100.0 40 ..................................... CGTGAGCACGGCCGGCATCTTCGTCTCGCGCAGTACAGCA 10305 37 100.0 34 ..................................... TCTTAAGTTTAATGTTTGCCCTGATGGACATGAG 10376 37 100.0 34 ..................................... CTTTCAACACCTCAACTGCCTGTGTCAGCCGATC 10447 37 100.0 34 ..................................... CTTTCAACACCTCAACTGCCTGTGTCAGCCGATC 10518 37 100.0 35 ..................................... ACGACGAGCATTGAAGCAGTCAATCGTAAATTACG 10590 37 100.0 34 ..................................... ATGGATAGAACGGAAATACCGTCGGACTACGTAG 10661 37 100.0 35 ..................................... ACGACGATTAAGGTCGGAGCAACAAACATCGACGC 10733 37 100.0 34 ..................................... ATCTTTTACCTTTTCCAACTGAATGTGCGTTCCT 10804 37 100.0 35 ..................................... AAAAGAAAATCCATCACTCATCAACCACCCTTCGC 10876 37 100.0 36 ..................................... ATGAAATCAACTCCTTCAACTGCAAGCGCGAATTTC 10949 37 100.0 36 ..................................... TCATAAAAAACAACATTTAAGCGAGATTCCGGCGAA 11022 37 100.0 34 ..................................... AGTCAAAAAATTTTTTAGCGCCTTTGGCGCGGCG 11093 37 100.0 35 ..................................... TAGCATCCACCGTGTTTATATGCTCCACAATCCGC 11165 37 100.0 35 ..................................... GTGAATCGGGAAGCGTGGAGCAAGACGCGGATCTC 11237 37 100.0 38 ..................................... TTGTTGTTGCTCCCGTAAATCAGCGATAGTAGGAGGAA 11312 37 100.0 36 ..................................... AGATTAACGGAATGCAAGAACTGTTACGTCAGCTTG 11385 37 100.0 35 ..................................... TGATTTAGGTGTAGCGTAAATTTCATGCCCCAGCT 11457 37 100.0 33 ..................................... TCCAGAATGGCAACGAATGAGGGAGTACATCTA 11527 37 100.0 34 ..................................... AATCTGAGTAGATATGAGCATCAGTTAGTCGCTG 11598 37 100.0 36 ..................................... TCATAAAAAACAACATTTAAGCGAGATTCCGGCGAA 11671 37 100.0 34 ..................................... AGTCAAAAAATTTTTTAGCGCCTTTGGCGCGGCG 11742 37 100.0 35 ..................................... TAGCATCCACCGTGTTTATATGCTCCACAATCCGC 11814 37 100.0 35 ..................................... GTGAATCGGGAAGCGTGGAGCAAGACGCGGATCTC 11886 37 100.0 38 ..................................... TTGTTGTTGCTCCCGTAAATCAGCGATAGTAGGAGGAA 11961 37 100.0 36 ..................................... AGATTAACGGAATGCAAGAACTGTTACGTCAGCTTG 12034 37 100.0 35 ..................................... TGATTTAGGTGTAGCGTAAATTTCATGCCCCAGCT 12106 37 100.0 33 ..................................... TCCAGAATGGCAACGAATGAGGGAGTACATCTA 12176 37 100.0 34 ..................................... AATCTGAGTAGATATGAGCATCAGTTAGTCGCTG 12247 37 100.0 34 ..................................... TACAAATTGGCGTTTATTTTGAGGATAGAGGTTT 12318 37 100.0 35 ..................................... AACCATTTTCGGTACAGAAGCCGCAAGCGGCATGC 12390 37 100.0 36 ..................................... ACGGCTCATTTCGCTTGTATTTGCAAAAACAACAGC 12463 37 100.0 35 ..................................... TGATATAAAAAACCTGATCGCAAAACGGGAAAAAC 12535 37 100.0 34 ..................................... AAGTATGCGGCGCCGATCGCAAAAACTCTTGGTA 12606 37 100.0 37 ..................................... ATAAGTATTGGAGAAATAGAGAAAATAGAATTAAAGA 12680 37 100.0 35 ..................................... TTAACTTGGATGTGAATTTTACACGTTTGGATTTG 12752 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 59 37 100.0 35 GTTGCACCCGGCTATTAAGCCGGGTGAGGATTGAAAC # Left flank : CGATGTAGAAACATTAGAACCAAGCGGTCAAAAACGGTTGCGAAAAGTGGCGACCATTTGCCAAAATTTTGGCCAGCGGGTGCAAAAATCAGTGTTCGAATGCAGCGTCAGTCAAGCGCAACTAGAAGAAATGGAGCATCAATTGTTGCGCGTCATTGACTTGGAAAAAGATAGTTTGCGGATATATACATTGTACGGCAGCCGGTCAAAGGCGGTTCGTGTCTATGGAAAAGATTATTACGTTGATTATAATGATCCCATCATTTTGTAATGACAAAGATGACAAAATGCCGATGATATGTGCGGCAAGAAGAGAATGATGCGCGAACATAAAGCGATGCTGAAAAATAGGGGGGATCGCGATGGGCGGAAAAGCTGGTTATAAAGCCGAAGATGGGAAATGGATCAGTGATCATTGCAACTTTGATCCAAACGGAATGTGTAAGTTCGCGTTTTTATATCTTGAAATGCGCTCAACACAAGATATCTAAACGCGGGCG # Right flank : CAAATTTGGTCAGGCCAAGCAGGAATTTGCTCCTTGCTGTCGAATTTATGTTCATGAAAATTGTTGCTTCACCTTTTCTACATCTTCTTGAAACTTCTCATGTGTTTTCGCCAGCACTTCTTCAAAGACGCCGTTGAGCCGCTGCTCGAGGACGGCGATTCCTTCTCCGGTGATTCCGCCTTTGACGCACACTTTTTCCTGCAGTGTTGGCAATGTGTACACATTCCGCTTGAGCAGTTCCCCAAGACCGATGATCATATCGGTCGCCAGCATCGTCGCCTGTTCCTTCGTGATGGCGGTTTTGGCCGCTGCGGCGTCGATGAAGCGCTGCAGCAAATAGCTGAAAAACGCTGGACCGCAGCTTGAGATGTCGGAAGCGACGCGGGTGATGGCCTCATCGATATACACCGGCGAGGCGATGCGCCGGAGAAGATCATCGATCGTTTGCCGGCAGTCGGCCGAACTGCGTGCCCCGAAGGTGACGAGGATGCTGCCGGAGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCACCCGGCTATTAAGCCGGGTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-15.20,-15.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : NA // Array 1 2569-2792 **** Predicted by CRISPRDetect 2.4 *** >NZ_LDNZ01000140.1 Geobacillus sp. T6 NODE_201_contig144, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================== ================== 2569 28 100.0 38 ............................ TTGATCAAGTGTTTTATATCATTGATCGGGCGGTGATG 2635 28 100.0 37 ............................ TTGCTGTCGCGGCTTGTGTCGTACTAGTGCTTGTAAC 2700 28 100.0 37 ............................ GGGCGCTCAATGTGTTCCGTATGGAGCTGTTGGGAGC 2765 28 89.3 0 ....G...................AC.. | ========== ====== ====== ====== ============================ ====================================== ================== 4 28 97.3 38 GTTTAATCTGAACGGAGAGGGATTTAAA # Left flank : ACCTCGCCACAGCGCTCGGCATCCAGGCGTGCCAACAAGGCCATGAGGTTCGGTTTTTCCGCGTCGCGGATCTCGTCGCCGTGCTGGAAGAGGCATTGAAAAATGGCACGCTCGGGCGGCTGAAACGAAGCATCGATGCGTGCGAACTGTTGATATTGGATGAACTCGGCTATGTGCCGTTTCAAAAGCAAGGATCGGAGCTGTTGTTTCATATTATCGCCGACTGTTATGAGCGAAAAAGCGTCATCGTGACGTCGAATCTGGAATTTGGACAGTGGAATCGGGTGTTTGGGGACAACCGCTTGACAGCTGCGCTGGTGGATCGCTTGGTTCACCATGCCCACATCCTGGCCTTTACGGGAGAGAGCTATCGACTGCGGAACGCTCTCTCCGCGATCCAGCCGTCCTCTTCCCCCGGTCTAGAACCTTAAGTCTTGAGCTGGCAAGCCTATGTATTTTTTCTTGCACTTCTCTGCATTTTTTGCTTGCAAAAAACATAC # Right flank : AGGCCGCTTGTTTGCAGCGGCCTTAGTTGAGCACTCCAATGAGCGCATCCTTGGTATCACAGTGAGGCGCTAACTAATCGCCACTCCTGCACTCGCATATCCCGTGACGGAAGCGGCAATCGAAAGGCCGGAAGTGGTGGTGAAAAACGCCATGAGCAGCCGGTCGCCAGCATTGACAGGCACGTTTAATCCTGTGACGATGCCGCTGGCGTTTTGGGCTAGGGAGATGGGAAAGGTGATTGATGGCGTTAATGTAATGAGCGTGCCTGGAATAGGCGAAAATACGTTGCTGGACGGAGAAGTGGCGATATACAATTGGGCGCGGATCGTAGCCGTTCCTAAAAGCGCTGTGCCCGCTGTGGCGGAAAAATTCGCTGCGATAGCAGTAATGATCCCTGAACGCGGGATGGTAAAGGAAAAATTCGATATCCCGCCAAGGTTTATGGTTCCTCCCACTAAACTGATGCTTGAAGCAGCATTTCCAAATCCGATCAAACTTG # Questionable array : NO Score: 5.72 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAATCTGAACGGAGAGGGATTTAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 1 30105-32867 **** Predicted by CRISPRDetect 2.4 *** >NZ_LDNZ01000139.1 Geobacillus sp. T6 NODE_201_contig143, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 30105 29 100.0 35 ............................. ACGTCTCAACTACCGAGTGCAAGCACCACACAAGC 30169 29 100.0 35 ............................. GACTTATGTGAGCTACGCGAAAATCGGGACACTTG 30233 29 100.0 37 ............................. CGGGAATTTTTAGAAATGGATCGAAAAGAAAAAGCGT 30299 29 100.0 36 ............................. AACCATACGGATTAAAAGGGGAACTAAGGCGCAACT 30364 29 100.0 36 ............................. GGCCAACGTGTTTATCGATCCGACATACGCCGTTAA 30429 29 100.0 35 ............................. CGGGAATTTTTAGAAATGGATCGAAAAGAAAAAGC 30493 29 100.0 36 ............................. GCGATGGTCGAAGACAACAAAAAAGCGCTCGATGTG 30558 29 100.0 35 ............................. CAAATTGCTGGCCTCCTTGAACGCGAAGCAGGATT 30622 29 100.0 35 ............................. TCGGAATAAAAGTTGCAATTGGATAGCGATTGAAT 30686 29 100.0 36 ............................. AATGCAAACTTCTTGTCTATCGGCGTGGAAATGTGC 30751 29 100.0 36 ............................. AAGCGTTTGACGCGGGGAATAAAGCCGGTATCAACT 30816 29 100.0 37 ............................. TCAATAGTGGAGCCGTGATTCGTGTCACCGACGGATC 30882 29 100.0 35 ............................. TCATAAAAAAAGAAGGCGGATCGCTCCGCCTTTTT 30946 29 100.0 35 ............................. TCTTCGTGTTCACAAAAACGAGATTTTTCTCGTTC 31010 29 100.0 36 ............................. GGAGATAGTTATTGACGGTATTTCTTTGGCGTGAAC 31075 29 100.0 37 ............................. CCCTAAAATGTAACCTTTACATTACATATTGTAAATC 31141 29 100.0 35 ............................. TGTATAACTCGGCACCGCAATGGCGACATTCGCCG 31205 29 100.0 37 ............................. CTGCCGGTAGGCTTCGTTTTCAAGCAACCAAAAACGC 31271 29 100.0 37 ............................. GAAATATCAAGGGGTTGAGCCATTTGGTGAGTGCATC 31337 29 100.0 36 ............................. TTTGGTGAGTGCATCAGTCTGTAAATTGAAGTGCAC 31402 29 100.0 36 ............................. TTTACTTAAAGAACTATATAAAAAGTGTTTTGAAAG 31467 29 100.0 39 ............................. TACTGCTTCAGTTGTCACTGAATCGCGTTTTACCAGTCG 31535 29 100.0 34 ............................. GCAAACAGGTTGATGTTGATTTTTGGCAGCGCAC 31598 29 100.0 35 ............................. ATCGACCACCACACCCACTATTGACCGCCCCCTAA 31662 29 100.0 38 ............................. GGATACCGTCTTGAGGCTTTATCTCGTGGTGTCACTTA 31729 29 100.0 35 ............................. GGCGGTGAGCCGTTGAACAATCCTGATGATTTGTT 31793 29 100.0 35 ............................. TGGAAATAAAGTATTTTGACACTGATGCCTTTTTC 31857 29 100.0 36 ............................. AGGTTGCCGCGAGTTTGAGCAGTACACGAAAAAGGA 31922 29 100.0 37 ............................. GATATGCAAGACGTATCAGCAACCCAACAATATCAGC 31988 29 100.0 36 ............................. CAAGTTCGGTTTCGACTTTATTTTTGTCGCTCAGTC 32053 29 100.0 38 ............................. TGTCATCATTGACGAGGCTGGCATCATGTTTAATAGTC 32120 29 100.0 36 ............................. AGCGATGAGCGATCACAAAGATGCCGGCTGGATCAA 32185 29 100.0 36 ............................. ATTCAACCCCAACTCAAGCGCATGATACGACTTACC 32250 29 100.0 39 ............................. GATAGTCCGTTTCAGACACAAGATTTCAATGAGACTCTT 32318 29 100.0 37 ............................. ACATCTTTCCGCCTCTCCCGTGAGACACTTGATATGT 32384 29 100.0 35 ............................. CAGCCGCCTGTGCGCGGAGCTGGGCGATTTTGTTG 32448 29 100.0 37 ............................. ATTTTTTTTCCAGTTCACTTAGGGGGGATGCATCTTG 32514 29 100.0 38 ............................. GTGTAAACTTAAGCGGAACAGTCATGCCGGCAATATGA 32581 29 100.0 36 ............................. TAAGAAAATCCCTGCGAACCTCTATTTCTATATTCC 32646 29 100.0 36 ............................. TTTTTTGAATTGTAATAAATTCAACGTATATGCTGT 32711 29 100.0 34 ............................. GAAACAATCCTAACGACAGGCGCCGCAAAAGCAG 32774 29 100.0 36 ............................. TCAGTATTATGTGTTTGAGGAGCAGTTCGCCGAAAG 32839 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================= ================== 43 29 100.0 36 GTTTAATCTGAACGGAGAGGGATTTAAAT # Left flank : ATGAACGATATAAACCGTTGAAAGCGTGGTGGTGAACCATGTTTGTTATCATTACGTATGACGTAGCGGAGAAGCGGGTCAACAAAGTTTGCAAAAAACTTAAAGGAATATCTCACTTGGACGCAAAATAGCGTATTTGAAGGGGAGATTTCGAAAAGTCTGCTGATGAAGTGCATGTATGAATTAGAGATGATCATCGATAAACAAGAAGACTCCATTTACTTATACGAAGTAGAAAACCCGAAGAATATAAAAAAGCGGGTATTTGGTCAGGAAAAGAATTTTGATGAGTTGTTCCTCTAAGCTTTAAGAATTTGCAGTGAACCGCATTTTAGAGGATGAATGGGAGAAATCTTGATTTATCAAGGGCAGTGCTTCATTATTTGCGTAACATTAAAAACACGATTATCACTTTACTGCAAAATACGGTATAATTGATGCGTAGGCATTAGCGTGAATTGCTTGCTACATCAATAAATATTATTTTGTAACTGATAGGG # Right flank : TTGAAAGTCGATGTTGCTGAATTGGAGAAAAAATTGGCGTTTAACTCACATTTCGCACCCTCCCGACGAAAATCGGGAGGATTTTTTCATCCCGATGTCGAATAGGTCCTTGGTACACAAGGAAAGCAAAGGAGTTTCCACACCATGGACGTTCGAATTCATGCTATTTATGAAAGTTCCTATTTGAATATAATAAGTGCCATCTTCAAGGATCTTGGCCTCCCCCAGCTGATTGACCGGCTGGTTCCGGTGGATCCCCAATGCCACACCCGAGCCAGCGATGTTGTCTGGCTGCTCATCCTGGATATCTTAAGCGGCCGTCAAGCGCTGGTTCATTTGGAACGATGGGCGCATGAAATCGATTTGCCCAAGCTGATCCGGCCGGAGCTCCAGCCTTCTTGGTTCAATGACGATGCCATCGCCCGCCATCTGGATCGCCTGTATGATGCCAACATCCATCAAGTCATTTCGGCTTGCCTTGTGCAGATCTACAAGAAGGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAATCTGAACGGAGAGGGATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 2 34798-37698 **** Predicted by CRISPRDetect 2.4 *** >NZ_LDNZ01000139.1 Geobacillus sp. T6 NODE_201_contig143, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================== ================== 34798 28 100.0 36 ............................ TTAAACAAGGCGAGATGCTAGACGGCACACCGTTGC 34862 28 100.0 37 ............................ TGACGATATTTTAGCTGAGATGCTCGGCTGGGAAGTC 34927 28 100.0 40 ............................ TGCTATCGAAAAGCACCGAAAAAATGAGCAACGCCCAAAA 34995 28 100.0 38 ............................ TTAAACACAACTATTGTCTATCCTACACAAACATGATC 35061 28 100.0 35 ............................ TCATGTCTGTCTTGGAAGAAAACAGCGCTGCGTTC 35124 28 100.0 40 ............................ TATGAAGAAACAAAAGAACTTATACAAGCAGGAAATTATA 35192 28 100.0 40 ............................ TATGAAGAAACAAAAGAACTTATACAAGCAGGAAATTATA 35260 28 100.0 37 ............................ TTTCAGCTTTTTGGAATGAGTTTAATTCGTTGAATGT 35325 28 100.0 37 ............................ TGTCACTAGCGTAAACGGAAAAACAGGCGCTATCACA 35390 28 100.0 39 ............................ TTTCTCATAACGATCGCAATATCGATTCCTTTTTCCTTC 35457 28 100.0 36 ............................ TCCATCCTGACGACATCACAGAGGTTGTCGTCGATA 35521 28 100.0 38 ............................ TCAAGATATAGTTTAGATGGGCGCCCGTACGAATTTTC 35587 28 100.0 39 ............................ TCTTCAGATGGCGTTGGTGCAGTTGAATAGAAATGCAGA 35654 28 100.0 36 ............................ TTGTATTGTGACGCCTATGCTAACTATGTTAAGTGC 35718 28 100.0 37 ............................ TGACCGTTTCTTCAGCCAGCTTTTGAAGAAAACAAAG 35783 28 100.0 36 ............................ TGGACGTCGCGAAATCGGGATCACTTCAGCAGTATT 35847 28 100.0 37 ............................ TTTCTCCTTTGCGTCTCGATGGCACCGTTGTTCCTCC 35912 28 100.0 38 ............................ TAGAAGGGCGAGCGTCCCTCGAGGATGATGCCGACAAG 35978 28 100.0 37 ............................ TTGTAATACCACTCCTTCACAACAATGCTCGTAATTC 36043 28 100.0 36 ............................ TATTAAGCTGCTTATAGGTACATTTAGCGCAGATGC 36107 28 100.0 39 ............................ TATTCATAAAGTCGGTTTGTAACTATTACGAAGAGAAAA 36174 28 100.0 38 ............................ TTTCGCAAAGCTCTATGACTTTCTCTAGCTTCTCGTTT 36240 28 100.0 38 ............................ TTGACAAACGCGTGAACGTTCTTTCTCTTCTCCTCTAA 36306 28 100.0 38 ............................ TGATGAAACCGCCAAAAACGTTTTTAAAGGACACTTTT 36372 28 100.0 39 ............................ TTGAACTAGACCGGCTTTCATAATCGAAAGGCAGTCATT 36439 28 100.0 36 ............................ CATGGGACATCGTACATATGACACATTATCCGATCT 36503 28 100.0 39 ............................ CAGTTCATTCGCTATGAAACAAAGACTTTTAACATGCGC 36570 28 100.0 36 ............................ CACAATTTGATTGCCTTGTACAATAACACCTTTAGC 36634 28 100.0 36 ............................ CAGCGACACGGCCAATGACATTTGAGGAGCATATGG 36698 28 100.0 39 ............................ CGGACATGCAATACACGTTCAAGTATGCGGCGCCGATTG 36765 28 100.0 36 ............................ CACATGATTCTCGCAAAACCGGGTTTGGTGGGAATA 36829 28 100.0 36 ............................ CAGACTTCGCACGCTCTACCGTTGCATCCGGCGCGA 36893 28 100.0 36 ............................ CTGGGTTGCCTCTCGCTATGACACAATGAGGATCTT 36957 28 100.0 38 ............................ CTTGTTACGAAACGAGGTATTCCGTATTTTTGCGACTA 37023 28 100.0 37 ............................ CTGGTCGCGATCAACTAAACGATAACCGGGCGGAATC 37088 28 100.0 39 ............................ CTGCTCTCTAAATGGGGTATCCTCTCGATCGAAATGCAA 37155 28 100.0 36 ............................ CAGGCTGTTGCGGTCAAGAACAGATGGCCGGGAGTA 37219 28 100.0 37 ............................ CATAAAAACTAACTCTCTTTCAGTTCTTAACATTTAC 37284 28 100.0 37 ............................ CAAAGAAGCACATCATCTAACGTAATGACACGATTGG 37349 28 100.0 37 ............................ CAATGCTCATATGGCTATTCTAGCGTACACCGGATCA 37414 28 100.0 36 ............................ CACAGATAGTGATGCGAATGAATTCGCGAAAGCAAA 37478 28 100.0 37 ............................ CTCGAATGGGTTACGAGGGATTTTTTCGAGTTTTACC 37543 28 100.0 36 ............................ CTCATGCATCCAATCCCGAGAATTAAACATAATACC 37607 28 100.0 36 ............................ CAGTCCTCCCAACTTGCGTTCATATCGATTTCTTGC 37671 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ======================================== ================== 45 28 100.0 37 GTTTAATCTGAACGGAGAGGGATTTAAA # Left flank : AAAGGGCAGATCTCGGTGGAAATGAACTTCTCCTTCCTGAAAGATCCGTTCTTTACGGACGAGATTTACGTGAAAAAACCGGAACGAGTGGCGGTGTTGGGCTATTTGTTTCTCCTCGCATTGGCCATTTACCGCGTCTTCCAGCGCCGGGTGCGTCAGTTTATTACGCCGGAGCGCCCGTTAAAGGGCGTAGGGGGCCGCAAGCTGACCCGTCCGACCGGGCAGGCGATTTTTCAGTTGTTCTGGTATGTGAAAGTCGTCCTGTTGGAGCTGCCGGATGGGCAAATCCAACGCGCGTTAGGTCAACCGCTCACCTACGAGCAGCGAAGGATTCTGCAAGAGTTGGGAATGGACGAAAGCATTTATGTCTAATCTCATAAGGAATGATGAGCGATGGTAAAAAAAGGATTGCCATCGCTTGTTGTGTTGGCTCAAAAAATATTTTAAAAAAATGAATAAAAAATCCTTTGTTTCTGCACTGCTGGGGTGCGAAATGTGAG # Right flank : TCATATACTGTAGATGAGCAAATTCGCTAACATAAATTGACAATCAAACAAAAAAGGAGACATGAACCGGACTCCTTGGTTAGAATAGATGTGCTACCAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAATCTGAACGGAGAGGGATTTAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 9255-13134 **** Predicted by CRISPRDetect 2.4 *** >NZ_LDNZ01000146.1 Geobacillus sp. T6 NODE_201_contig150, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 9255 30 100.0 35 .............................. TTTTTTGTGTAAAAAAAGCGGAGCTATCACTCCGC 9320 30 100.0 37 .............................. CATCAAACTGGGAAAACCAAAAAAGCGTTACTTGATA 9387 30 100.0 38 .............................. CAAAAATATATTACAATAATCATGAAATAAAAGAAAAG 9455 30 100.0 40 .............................. ATGTAAAACATGCCCCCTATATGCTTTTCAATTGCCCTGA 9525 30 100.0 35 .............................. TAATTTTATTATTCCCAACCTGCCAACCGTTTCCG 9590 30 100.0 36 .............................. ATTTTTTCACGTCTGAATATCCAATTAGCTTCATGT 9656 30 100.0 35 .............................. CAATGCAAGCCATTTCGCTATTTTCTGCGTTGTTA 9721 30 100.0 34 .............................. TTGTAGTATCAGACAGCGGCGCTGAACCGCTGGC 9785 30 100.0 36 .............................. AAAGTTCAATACCAGCACCAAGGCGCAATAGCTTTG 9851 30 100.0 36 .............................. ATAATTGCGCCTCCGCCTCGATTTCTTCCCGTGTGT 9917 30 100.0 35 .............................. GTAAAGGCACACTCTCGGCAGGCGGAAGTGAAGTG 9982 30 100.0 36 .............................. TAATATTCAAAATCTTCTGCTGCCACGATGAAACTG 10048 30 100.0 34 .............................. ATTTTTTCGTTCCGAATCTTTTTGGCGACTTCGG 10112 30 100.0 35 .............................. CCGCAAGGGAATGGTAAACTCCCGCCGCGACGGCC 10177 30 100.0 36 .............................. GATATTATTTTTGAGGGGTATAACGCGTTTAAGACT 10243 30 100.0 35 .............................. TGGGGTCATGGTTTCGTGCATATAAGAGCGATAGA 10308 30 100.0 36 .............................. CCCATTTGTGTTTATCTTTTTCATCCCAATAAATCC 10374 30 100.0 38 .............................. ACTCAATCTCACCGAGTAGTCCACCGCTGTATGTCAAT 10442 30 100.0 38 .............................. GAGGTGAGCCAACGGCAAATGTCCAAGTGGATTAGTGG 10510 30 100.0 35 .............................. GTAAAGGCACACTCTCGGCAGGCGGAAGTGAAGTG 10575 30 100.0 36 .............................. CGAGTTTGCGCGCCACTTTTGCTGCCAATTGCAACA 10641 30 100.0 38 .............................. AGCTTTCCTATAATTCTAACATTCTTCGTATCTTCCGG 10709 30 100.0 35 .............................. TTTTGTTAATGGTGCTTATGTTTTTAGGGCTGTGA 10774 30 100.0 35 .............................. CCTCGTCTATTTCCTGCTCAACAAAGCCATCACGC 10839 30 100.0 38 .............................. AGTCCGATCAGGTTGTCCAAGTCGAGCTCAATGACAGC 10907 30 100.0 36 .............................. CCGAAAAGATTTGATAATCCTTCACCGCTACGACAA 10973 30 100.0 36 .............................. TCGCGTGTCGCAAGTTGATTCCGATTTCGGTACGGT 11039 30 100.0 36 .............................. TCCTTCTCTCTTTAAGGACTCGCTGGCGTCCTTTCT 11105 30 100.0 36 .............................. ACACACCGAGGGAACAGGCATGACACAAGATATTCC 11171 30 100.0 34 .............................. CTTCAGCAAGTTCTTGTTGATACTGTGTCACAAG 11235 30 100.0 38 .............................. ACTGTTGCGATGACGCGCTTCTTGTCGTCAATAATCTT 11303 30 100.0 39 .............................. TGACGAATGGTCGATCCCATGCGCTCGCTCAACGGTTTA 11372 30 100.0 36 .............................. ATTTTTCGTCAAATGTTATTTTTTTGTAGATTACTT 11438 30 100.0 38 .............................. TCGAGAATTGCGAGTTGAGCGAAGAAATCGCGAGCTTA 11506 30 100.0 37 .............................. CGTTGGTCGGAGGCGGCATATTGATTATTCTTTATGC 11573 30 100.0 35 .............................. TAAAATAAGATACCTGCAATTCCACACATAGGCTT 11638 30 100.0 34 .............................. TGACGATCACTTTCCCACCGTCAACCGCTATGAC 11702 30 100.0 36 .............................. TCCCAGCGCACGCTCGGATTCATCACGCGCGGAACA 11768 30 100.0 35 .............................. ACAGCTCGAACGCTTTCTCTGACACGTTGCATTCC 11833 30 100.0 38 .............................. TCGCTTGACTGACGTTGCCGTTGAAAATATATGACTCG 11901 30 100.0 34 .............................. CCAGCCTAAATCGCGACTTGGCCTATTATGTTGG T [11913] 11966 30 100.0 39 .............................. AAAAGTGAAGCACATCGGATAGCTCCTCAAAATAGCTGC 12035 30 100.0 35 .............................. ATTCCAACAAAAACACGGCGTATTGCTCCCATGTC 12100 30 100.0 35 .............................. TTTTTCTATCGCCGGTCTCAATATAACCGCTTTTC 12165 30 100.0 37 .............................. TATAACACTTTTGCATATGTAGATGTCATGGTGATCG 12232 30 100.0 34 .............................. TATTCATAAAGAGCTTTTACTTCATTCATATTAA 12296 30 100.0 36 .............................. AGTTTTGTTCCCGTCTTCTCGATCCCTCCCGAGTTT 12362 30 100.0 36 .............................. GCGCTAATCGCCGATAAACTATTAACGTTCAGCTTA 12428 30 100.0 39 .............................. TTGTGCAATTTGTTGTAATTCAGTAATTACATTTCGCCA 12497 30 100.0 37 .............................. CATCGAATGGTTAGAAAGAAATGACAAAGGCGCTATG 12564 30 100.0 36 .............................. GTTTCCATATTTCTCAACCAGAGAGCGAATCGAATC 12630 30 100.0 36 .............................. AACCGCGTCATCCCCGACGCGGCGGCGGGATAGAGG 12696 30 100.0 39 .............................. TTCACCAAAAGACAAGACAACGAACAACGAGCGGGTTGT 12765 30 100.0 36 .............................. GTTTACGCCGTAATATCGCTCTCCCATGTATTTCGA 12831 30 96.7 37 .................A............ TCTTGGAACTGTGGCAAAAAGCATTAGTTGCCGCAAC 12898 30 100.0 40 .............................. CGTATAACCCATATAAATACAGTAGCTTTGTAACGTATGA 12968 30 100.0 36 .............................. TATTTTTCATTCAAACGAATAAAATGAAAAACATTA 13034 30 100.0 41 .............................. ACACATCTGTTCAACAGTTAAATCACGTGGTACAGGAATAC 13105 29 83.3 0 A...........T..G...-...C...... | A [13121] ========== ====== ====== ====== ============================== ========================================= ================== 59 30 99.7 36 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : TGAATCCGGCGCTGTCCGACGACATCATCCGCGTCGCCCGCTCGCCGATCCGCAAACTTGGACCGAACGACCGCCTCGTCGCGCCAGCCGTGCAATATTGCGCCTTATTTGGCAACGTCCCACACGGCTTGGCTAAAGGAATCGCCGCCCTCCTGCGATTCGATGATGCCCGCGATGCGGAAGCCGCCGCCCTTCAACAAACAATCGCCCAGCACGGGATCGAAGGCGCGCTTCGGCAATATGCAGGCCTTGAGAGTGGGCACCCGCTTGTGGCGGCGGTGAAGGACGAGTACGGAAGAATGGAGAAAAACAAAAGCTGACCGTCTTGCAAATGTCGTCGACCTCCAATCGTGCAAAAATCCCGGGGGATCGACGACAATGTTTTTTTGCGTCAAAATCCTACAAACAACACGGCTGAACGGTATTGACAGAATTTTTGAAACGTGATATTCTGAAAACAACTCAGAGAGAAAAAGCTTGATTTGATGCGTATGGTTTGG # Right flank : CACTACAGTACCGTACAACATTTTCCCTCTCCGATGCAGGAGTTTCCGTCTGTACTTGCGAATGGATATACTGGAACACGTTCAAAGAGAGGTGATCAAATGGCCATTGATCATGACCGATTGTTCAAAGAGCTGATTCAAACGTTCTTCGAAGAGTTTCTTCTCCTCTTTTTCCCCGACATGCACGAACACATTGATTTCCGCCATTTGTCCTTCCTGTCCGAAGAACTGTTCACTGATGTCACGGCAGGTGAAAAATACCGCGTCGATCTATTGGTCGAGACGAAGCTGAAAGGGGAAAATGGGCTGATCATCGTTCATGTGGAGAATCAAAGCTACGTGCAACCATCGTTTCCAGAGCGCATGTTTATCTATTTCAGCCGTCTGTTTGAAAAATACCGCACGCGCATCGTTCCGATCGCTGTCTTCAGCCATGATGCCCTTCGCGAGGAACCATCCGTGTTCTCAATCGCGTTTCCCTTTGGCGACGTGCTGCAGTT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 21215-23492 **** Predicted by CRISPRDetect 2.4 *** >NZ_LDNZ01000146.1 Geobacillus sp. T6 NODE_201_contig150, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 21215 30 100.0 35 .............................. CTCTTATGCTTCTCATATGCTTCTTTCGCTTTTTC 21280 30 100.0 36 .............................. TACGTAAAACTGGATGTCCACGATTTTGACGCAGTC 21346 30 100.0 36 .............................. CCTTTTACTCAAATGAGAAACCAAATCCGTCGACAA 21412 30 100.0 36 .............................. TACGTAAAACTGGATGTCCACGATTTTGACGCAGTC 21478 30 100.0 37 .............................. TAATTTCGTTAAGTTTTATGTTCAGAATCAATTGTAG 21545 30 100.0 35 .............................. ATAAAGGAGAGGATTCTATTATGAAAAGCCTTGTG 21610 30 100.0 38 .............................. TCGTTTTTCTTTTTCCTTTTTCGGCGACAAAATACACC 21678 30 100.0 37 .............................. TTTTTACCGTAGAGGCGTTGACAAGTGACCAATACGA 21745 30 100.0 37 .............................. TCAAAAAACGGTTCGAGCCCATGAAGGAACACAGCTG 21812 30 100.0 36 .............................. ACGCTAAAGACAGCTTAAAATATGGAGATTTTTATT 21878 30 100.0 36 .............................. CTTTGAACGCCAACTTGAAAAATGTTACAATTTCTA 21944 30 100.0 37 .............................. CTGGGTGTGGTTCGAGGAAGCCTTTGAAATCGAGACA 22011 30 100.0 36 .............................. CGTCCGATCGCAAACGAATATTAATTCGCTCATCTC 22077 30 100.0 39 .............................. TAATCGGTCTAAATGCTCCTTGATAAAGACATTCGGCAG 22146 30 100.0 38 .............................. ACAGAAGAGCAAGTCAAGGCATTCCGAATTGCAGACAA 22214 30 100.0 36 .............................. TTCATCGTGCAAAAAATCATGTTCCAGACCAAGGTC 22280 30 100.0 37 .............................. TGAAACGACAAACATTCGGCAATTTCGCGTCACGACA 22347 30 100.0 38 .............................. TCAAGTGGTAATTTTGGACCGGCTGAATTTTAGGATTC 22415 30 100.0 35 .............................. TTCAAATTTCATCACATTGTCTACATAACGAATCA 22480 30 100.0 36 .............................. AAAAATTCGGCGTAATGCAGCACCTCGAAAACGCCG 22546 30 100.0 35 .............................. AACGTACCGCCACGCCACCTTTCGGTTGCGTTTGC 22611 30 100.0 38 .............................. TTTCTTCGTTGGCTAGCGTTGGTCTTTCGGTGATGGTG 22679 30 100.0 37 .............................. CCAGACGACCGGAAAGAAAGTCCGGTCGCTTCGAACT 22746 26 86.7 36 ............----.............. TCTTTCCAGAACGGGATAATTTGCTCGCTCGGAATC 22808 30 100.0 35 .............................. TAAAGGGACGTCCGGAGCATCATGTGTCCAACTTT 22873 30 100.0 35 .............................. AAACGAAAGTCATGACAATGTGACGAGGGTAACGA 22938 30 100.0 36 .............................. TTAGCTTTTCCGCTTTTGATTGCAGATGTTGCTAAC 23004 30 100.0 36 .............................. AATTTCAGTGCCAACTGTGTGATCAAATGGAATTTG 23070 30 100.0 34 .............................. TACTTTTTTCTATTTGCTTTCGTACGGCATTTCC 23134 30 100.0 34 .............................. CCATCTGAACGTCAAGAAATCGACAACCTTGCCC 23198 30 100.0 35 .............................. TCTTGGCTAAAGATTTCTGGGATGCGGCGTTTCCG 23263 30 100.0 38 .............................. AAAGATGACGATATCGTGATATTCAGTCATGACAATGA 23331 30 100.0 36 .............................. AATTTACAGCCACTTTTGGCTTCTTTTGCGACGTTG 23397 30 100.0 36 .............................. CTTCATTCATGACGGCGCGCTTTTCATATTCTGCGA 23463 30 93.3 0 .....................A.C...... | ========== ====== ====== ====== ============================== ======================================= ================== 35 30 99.4 36 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : TGGGAGCGCAAATCGCCTACGCCCGGTTTACTGCCTTGCCGCCGCTTGTGTATGTGAGTGTGCTTGGGCGCCTGATGGTGTCGCCGCTGTTGGCTGCGTCTTTGATCTTTCTATTAGGAATGGATGGCGTGACGGCTCAAGCGTTGCTGATTGCCAGTTCGTATCCATGTTCACGCAATACGGCGCTGTACGCGCTCGAGTATGACTGCCACCCCGATTACGCCGCCCAGGCAGTGCTGGTGTCGACCTTGTTGAGCGCCATTACCGTGACAGGCACAGTATATGCGGCCCGCCTGCTGTTTCCGATTGGCGGATGAAAACAGGGGGCAAGCTGTCGTCGACCCCCAATCGTGCAAAAATCCCGGGGGATCGACGACAATGTCTTTTCGCGTCAAACTCCTACAGCCAACGCAGCTAGACCGTATTGACAGAATTTTTGAAACGTGCTATTCTGAAAACAGCCAAAAGGGGAAAAGCTTGATTTTATGCGCATGGTTTTG # Right flank : CTATTTCCCGCCACAGCTGAGCCGCCGCTGAGTTCAGCTTGTTTTACCGCTCGACATAGGAAAAGAGCAAATGCGAAATGGCGCATGCCCAAAAAACGTGGGAGGGATAAGGAGGAATTTGGACGCGAAGAGCGAATACAGTACGGTGAATCCGACAATGCAGGGAGGGAAAATGTGGCCAAACAGCGCGTCGATCATGACCGGTTGTTCAAAGAGCTGCTGTCGACGTTTTTCGAAGAGTTTTTGCTTCTTTTCTTTCCTCACGTGTACGAGCACATCGATGTTCACCATCTCTCTTTCCTCTCCGAAGAATTGTTCACCGATGTGACGGCTGGGGAAAAGCATCGCGTCGACTTGTTGGTCGAAACAAAGGTGAAAGGGGAAGACGGGCTCGTCATTGTCCATGTCGAGCATCAAAGCTACACCCAGCGGACCTTCCCCGAGCGAATGTTCCTCTACTTCAGCCGCTTGTTTCAAAAATACCGCCGCCGCATTCTCCC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //