Array 1 70818-69140 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOUW01000009.1 Faecalibacterium prausnitzii strain AHMP21 HMI19_contig_9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================== ================== 70817 28 96.4 33 ............A............... CATATGATGATGACCATGTACCGGGCATGATAG 70756 28 96.4 33 ............A............... CATTCGCTTGTCAGTGCGTACCGGCATCCGCTG 70695 28 96.4 33 ............A............... CCCCGGCTGCGATCTTGCGGACAAAGGCTTCCG 70634 28 96.4 33 ............A............... CAGACGGAACCTGAACAACAATATCAATTTCGT 70573 28 96.4 33 ............A............... CATGGTTTTGCGCATACCCAGACCAGCGCAGAC 70512 28 100.0 34 ............................ CCCTTTTGGGCGCGCGGTGCTGCCCGCCCGCAGG 70450 28 100.0 33 ............................ CTTGGGGCCGCACACGGCCCGGAAGGTTGCCGC 70389 28 100.0 33 ............................ CCAGTCAGCAAGATCGGCCATTTCTTTGGTCAG 70328 28 100.0 33 ............................ TATCAAAGGTCTGCTGTAGCATATTCGATGGCC 70267 28 100.0 33 ............................ CAAGAACATCCAGATCACCCTGCGTGCTGCTAT 70206 28 100.0 33 ............................ CTGGTGCGGGTATTTATTTTGCCACGACGGAAT 70145 28 100.0 33 ............................ CTACTACGACTACGTGGACACCCTGCGGGAAAG 70084 28 96.4 33 ...........................T CCGTTGCGTTCTCCCTGCTCCAATTTCGGATGT 70023 28 100.0 33 ............................ CACTCTGCAACTGCTCATACGCCTGCTGTTCGG 69962 28 85.7 33 ...........ATG............T. GCTGAATGCCGAGAAGGACGGTGCCTATTCCAG 69901 28 89.3 33 ............TG...........A.. CATGGCGGAGATCACCGCTACGGTCAGTTCCGC 69840 28 92.9 33 ............T.T............. CATGATGGAGCGGTTTCGTGTGGAATTGCTCAA 69779 28 92.9 33 ............T.T............. TCCCGGTGCGCCGGACGATTTCAGAGTGTCAAG 69718 28 100.0 32 ............................ TCGCAGTTGTCAATTTTGGGATTGTCAAAAGG T [69692] 69657 28 96.4 33 .......................A.... CAGGAAGAGGATGATGATTCACCACGCGCCGCC 69596 28 96.4 33 ..............T............. CTACGCAAGCATGGCAATGGACTATAAAACTGT 69535 28 100.0 33 ............................ CTTTACCATTACAACGCTGGCCCGGTCTCTTGC 69474 28 100.0 33 ............................ CAACACAACCAGATGCATGCCGCTGTACAGCGT 69413 28 100.0 33 ............................ TGAGAAAAAGACTCACATATGCAAGCTGGGCGG 69352 28 96.4 33 ............T............... TGATGATTCCACCTATCCCTTCATCAGCTACCT 69291 28 96.4 33 ............T............... CAGCCCAAGCCCCGGCACTGTCTGCCTGTACGC 69230 28 89.3 35 A...........T..........A.... CAAGGATGGCACCATGACCATCATGGCCAGAAACC 69167 28 85.7 0 .......................TCCA. | ========== ====== ====== ====== ============================ =================================== ================== 28 28 96.4 33 CTTTTCCCCGCCCACGCGGGGGTGATCC # Left flank : GCCGCCTCAGATGCCATTGTGGAATACGGCGCTCTCCGTGTGCGGGATGGTCAGCCTGCCGAAGAATTTTCGGCCCTTGTCCGGGGCACAGAACCTCTGCCGGATGTGGTGGCAAAGCTCACCGGCATCACGCCGGAGGAGCGGAGCGGCGGTATGGAGCCGCGGGCCGCGCTGGAGGCGTTTCTCGCATTCGTGGGCAAAGATACGCTGGTGGGCTATCACCTGAAATTTGACCTTGATTTCTTGCGTGCGGCCTGCATTCGGAATGACAGACCCCTGCTTACCAACCGCAGCATCGATGTTTTGCCCCTTGCCCGCCGTAAGGTGTCGGGGGTGATGAACTATAAGCTGCTCACGCTGGCCCGGCATTTTGAGGTTGCCCAGCAGGAGACCCATCGCGCCCTGCCCGACTGCCGCCTGATCCAGCAGGTCTATGCAAAACTGAATGAAACGGGATCGGCCCACTGATAAAAATGCCGCTTCTATGGGATCTTTTTAGT # Right flank : ATTGACAACCCTGCGCAAAAAGCAGATAATAGGTTTATCTTGAATGCAGAGCGAGGGAAAGTATATGCTGTATTTTGAAAACGATTACTGCGAGGGTGCGCATCCGGCGATCTTACAGAAGCTGGTGGAGACCAACTTTGAAAAGGTCTCCGGCTACGGCACCGATCCCTATTGCGCCAGCGCGCGGGAGAAGATCCGCGCGGCGTGCGGCGCACCGAATGCTGATGTCTGGTTCATTTCGGGCGGCACCCAGAGCAACGCCATCGTCATTGCATCGATGCTGCGCCGCTGGGAGGGTGTGCTGGCCGCATCCACCGGCCATGTGGCCGCTCACGAGGCCGGTGCCATCGAGTTCACGGGCCACAAGGTCATCGGCCTGCCGCACACCAACGGCAAGCTGGATGCCGGGACTGTTGAGGACTGGTGCAGTACCTTCTATGCCGATGGCAATATGGACCACCTCGTGTTCCCGGGCATGGTGTACATCTCCCACCCGTCGG # Questionable array : NO Score: 5.70 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.62, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTCCCCGCCCACGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGTTCCCCGCACACGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.20,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.91 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //