Array 1 182037-179509 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUDI01000002.1 Klebsiella pneumoniae strain 162J10 contig_0002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 182036 29 100.0 32 ............................. TTAACCATTCTCCCCGGCTCAGTACCTGCCCG 181975 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 181914 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 181853 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 181792 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 181730 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 181669 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 181608 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 181547 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 181486 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 181425 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 181364 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 181303 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 181242 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 181181 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 181120 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 181059 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 180998 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 180937 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 180876 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 180815 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 180754 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 180693 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 180632 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 180571 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 180510 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 180449 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 180388 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 180327 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 180266 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 180205 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 180144 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 180083 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 180022 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 179961 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 179900 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 179839 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 179778 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 179717 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 179656 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 179595 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 179537 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 42 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //