Array 1 1154-2790 **** Predicted by CRISPRDetect 2.4 *** >NZ_UXEX01000052.1 Flavobacterium psychrophilum isolate 27-SE164_S11_R1.fastq.gz, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 1154 46 69.6 29 TAAT.T....A.ACC...CGGGT....................... TTTTGTTTTCGTCAAATTCCCCATTTGTG 1229 46 100.0 30 .............................................. ATTAATGCGCTAATTATCGAAGGTAGCACT 1305 46 100.0 30 .............................................. AGGACGATTATAAATTTATGCTAAATATTA 1381 46 100.0 30 .............................................. AGCGATGGAAAATGCGCACGAGCTTACGCT 1457 46 100.0 30 .............................................. AGATATATCTAATACTAGAGCGTACGACAG 1533 46 100.0 30 .............................................. AAAAACAATATCGAAAAACTGAAAGAGAAT 1609 46 100.0 30 .............................................. ATTTAATGTAATTGTACCCGAACCAGCTCC 1685 46 100.0 30 .............................................. TATATCCGTGTTTGAATACACATTGCCACC 1761 46 100.0 29 .............................................. CGTTTTCGCACGTGAAATCAAAGTACTAT 1836 46 100.0 30 .............................................. TTTTAAAAAATGGTTAAGTAGGAAAACTTA 1912 46 100.0 30 .............................................. TCCAGTAAGCGAGATGTCGTATATCAAAGT 1988 46 100.0 30 .............................................. AGCCAATGCCTTGTGTCCTGTTATGTGTTC 2064 46 100.0 30 .............................................. AAAAGATTTAGCAACATAGATGATTGTTTT 2140 46 100.0 29 .............................................. TTTTACTTTTTATTTAAAGCAACTGTAAT 2215 46 100.0 30 .............................................. TAATAAGTTGCTCGTTTCCGTTTATTCCGT 2291 46 100.0 30 .............................................. AGTAGGTAATGTATTCACAATAGACACATT 2367 46 100.0 29 .............................................. AAAACGAAATACATACAGCGCACGCATTC 2442 46 97.8 30 ............................C................. AGGCACTTCTTTAGACTTAAATAAGTCTTT 2518 46 100.0 29 .............................................. AGTAATAGATGGGGGGTTTGAATGCCGTA 2593 46 100.0 30 .............................................. TCATCATCTGATGAAAATTGCTGTTCAATA 2669 46 100.0 30 .............................................. AAGCAAAATAAAATAAAAGAAATATTTAGC 2745 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 22 46 98.5 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : TTGCGTGGTACATCAAATTAGAAACGCTTGTAGATATGTGGTATGGAAAGACAAAAAACAATTTACAACCGATATGAAACTTGTTTATACAGCACCAACAAAACAAGCTGCCGCATTAGCTTTGGAAGATTTTGCTCAAAAATGGGAATCCAAATATGGTTATGCCATCAAATCCTGGAGAGAAAACTGGGACGAATTAACCGTGTTTTTCGACTTCCCGCTAGAAATTCGAAAAATAATCTATACTACAAATTTAATAGAAAATTTAAATGGAAAAATTAGAAAATACACTAAAAATAAAATGTCATTCCCTACTGATGATGCGGTTCTAAAATCAGTTTATTTAGCTTTAAAAGAAGCAACAAAAAAATGGTCAATGCCAATACAAAATTGGGGTATTGTTTTAAATCAATTTAATCTTATATTTGACAAAAGGCTCAGATTATAAAATCCAAGCCTAACTTTTTAACTTACACACTTTGCGGGATAGTGTCATCAAA # Right flank : CATACCGCGAGTTAATCGTTTGATATGTTGGTGGTTATATGCTTATTTTGAAATTAAAAAACAGTTCTGTTTGTGTGTTGATATTCTGGTAGGTCTAATATTTCTAAATCCTATTTTTCAAAAAAGTTCTAATTGTTGCGAAGGTTTGTCTGTTTCTACAGGTTTTTTTCCATAAAAAAGCTCCATCATACCAAATTGTTTATCGGTTATTTGCATTACTCCAATTTTGCCGTGTTCGGGCAAACTATTTCTTATTCTTTTGGTATGTACTTCGGCATTTTCTCTGCTGGCACAAAATCGTATATAGATCGAAAACTGAAACATAGAAAAACCATCGTCCAATAATTTCTTGCGAAATTCACTGGCAATTTTACGCTCTTTCCGCGTTTCGGTAGGTAAGTCAAAAAAAACTAATATCCACAAACTTCTATACTGGTTTAAACGGGTGTAATGTTCGTCATACATAAATAGGGTATAAAATTTTTCTTGCGGCTCCCGCA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.00,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //