Array 1 125867-124557 **** Predicted by CRISPRDetect 2.4 *** >NZ_UDAT01000012.1 Escherichia coli strain VREC0582, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 125866 29 100.0 32 ............................. GTGACCATAAGGGCATTTCATACTGCCTTGCT 125805 29 100.0 32 ............................. GTGAACGTGACAACGCCCGCGACAGAAACGTC 125744 29 100.0 32 ............................. GGAAGAAGCGGTAAAGCGGGTTCCAGTTCAGC 125683 29 100.0 32 ............................. AAATTAATTTCGAAACGGGCGTTGATGGTGAA 125622 29 100.0 32 ............................. GCTGGCGCACCTTACGCAAAAATAGACGTAAA 125561 29 100.0 32 ............................. CCAGGGAGCGAAGCTGTGGCCATGCTGAAAGG 125500 29 100.0 32 ............................. GGGTTCTATTTCCTCGGGATTTGCCGACACGC 125439 29 100.0 32 ............................. GTCAACGCTGGTCAGGCGTGGTACTTCCTCCG 125378 29 100.0 32 ............................. GCTGCCGCGCTTTCGGTGTGGGAGCAGTATGA 125317 29 100.0 32 ............................. AAACTCCGTGGTGTAGTGCGTTTGTTGGTGCG 125256 29 100.0 32 ............................. TTGGTATTAACGGGAATGTAGTCACTCCAGGA 125195 29 100.0 32 ............................. GCGATCGTATTTTCCGCTACGTCGCTCAAATG 125134 29 100.0 32 ............................. TCGTTGATGGTGTGATGAGTGTACAAAAAAAA 125073 29 100.0 32 ............................. ACGACTGAATCCGGCGAGGCTATCAACTGGCC 125012 29 100.0 32 ............................. CCGCACACGTCGAGCTGGTGGGGATTAATGCT 124951 29 100.0 32 ............................. CAGTAAACGTTCGCGCGTTCTCGCGCTCACGA 124890 29 96.6 32 ............................C TCTGTGTATTCGCTACCAGCCAGCACCGGTAC 124829 29 100.0 32 ............................. CAGGGTAACTGGCTGCTCCTCAACCATTCCGC 124768 29 96.6 32 ........C.................... GGGTTTTAGCGACCGGACCAGAGTACGCAACA 124707 29 96.6 32 ........C.................... TTGCGCCTTAAGTTCCTTAACTTCCTCTGTAT 124646 29 96.6 32 ........C.................... GGAGTGATGAATTGGAAGTAACGGATAACCGC 124585 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 22 29 99.4 32 GTGTTCCCTGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCCGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCACCAGCTATCCCGGAACCTGAATTGCTAGGTGATAGTGGTCACCGGGGGCGCAGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTTGCAATCTGGCTCCTGGAAGTACGTGCCGGTGTTTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCCCAACTGGCAGGTTGCGGAAATGTGGTCATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGGTTGGTTTCGTTTCTTCCTGTTGAGAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAAAGTTTGAATTTAGTTGGTAGATTGTTGTTGTGGAATAAAATTGTTTAAAAACAGATACGTATGCTTAGT # Right flank : GACGCACTGGATGCGATGATGGATATCACTTAGAGTTCCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTTCCAAGATTCCAGTTGGTCGCCTCCACCGAAAGTACCGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAAC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCTGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-11.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //