Array 1 174772-175654 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGPG010000012.1 Klebsiella grimontii strain 4928STDY7071479, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 174772 29 100.0 32 ............................. GTTACACGCAGGTTTCAGGCTCTGGCCTGAAT 174833 29 100.0 32 ............................. GCGCAGAAATAATGATAACTGGATTAATATTC 174894 29 100.0 32 ............................. GGGTATCCCATGCCTTTAGACTCTGAAGCCGC 174955 29 100.0 32 ............................. TTCGCCATATTCACAACGCCCGCGCCACCGGT 175016 29 100.0 32 ............................. ATACTTGATCGGTTTTGCCGTATTTTTTTGTT 175077 29 100.0 32 ............................. CATCACTGATAGCTTTCGGGATTTTGTTGATC 175138 29 100.0 32 ............................. TACGCCTTCTTGTTCGTCAGCGGGTCGACGTA 175199 29 100.0 32 ............................. TTTTTGGCTTGAAAATGCTTTTTGTGGATAAC 175260 29 100.0 32 ............................. CTGCTGGGCGTGGCCTGCGCTGTAAATACGTT 175321 29 100.0 32 ............................. GTTAATCATGCGGTTCGCCAGCTTATCAGTGA 175382 29 100.0 32 ............................. TGTTCGATATCACCGACGAGGTAGACATAGCG 175443 29 100.0 32 ............................. CTTATCTTGAGCAACCGCGCAACCGCCTTGGC 175504 29 100.0 32 ............................. TTTCTCCGCCCATAGGTACAGGGTTTGCGTAC 175565 29 100.0 32 ............................. CCTAAAACTGGCGTCACAACAATAAACACCGG 175626 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 15 29 100.0 32 GTGTTCCCCGCGCTAGCGGGGATAAACCG # Left flank : GTGCTAGATGCTGGTGAGATTGAGCCGCCTCAGCCAGCGCCAGATATGTTGCCGCCGGCGATACCAGAGCCACAGCGACTCGGCGACGGCGGGCATCGGGGGCATGGCTGATGAGTATGGTAGTTGTTGTTACGGAAAACGTGCCGCCGCGCCTGCGAGGACGGCTTGCCATATGGTTGTTAGAGATTAGGGCTGGCGTCTACGTCGGCGATGTTTCAAAACGTGTGCGGGAGATGATTTGGCAACAGATTACGCAATTAGGCGGCGCTGGAAATGTTGTTATGGCCTGGGCGACGAATACAGAGTCCGGTTTTGAGTTTCAAACTTGGGGAGAAAATCGACGTAGTCCGGTAGATTTGGACGGCCTGAGATTGGTTTCTTTCCTTCCCATTGAAAATCAGTAAGTTATAAGTTCTTTAATAAAAAGGAATTGTAGAACATAAGTTGGTAAATTGTTGCTCTCTGAAAATTGTAATAGAAAACAAATATATATATTTAGA # Right flank : GGTAATATTCTATTAAATTTAATCAGTTAGGTAGTGTTCCCCGCGCCGCCATTCTTATTATCCTGTACTTTATTTTTTTACGTCATTATTTAGTGTGGCAAAGTCCAGTTCCAGTCAATACTTGCCAAAATTTTTGGCTCATGGGAACAGTGCGCCGTTTTTAACATAGCGCTTATACAGACGTTTTACCGATGCTGGGTTCTGAGCCCAAATCCAACCCGTCGTGCCAGACGCGCTGCCAGATATAAACCTGGTTGTCGGCGATGGACCGCGCGCTGGCAGCCAGTAGTAGAAACAACGGTATTAAAAAGCGAAAACGCATCATGGCGACAGTCCTTGTTGCCAGATTTTATCGTTAGTCTATTTTGAGGTGGGCTTCTTCTCCGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACTTTCATCACATCGCGTCCGCGATGCTCAATCCGCCCCGGCAGCGCTTTATCAATATACTGCAGGTTATCCAACTGAAGGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCTAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCTAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 61628-60866 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGPG010000005.1 Klebsiella grimontii strain 4928STDY7071479, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 61627 29 100.0 32 ............................. CGATCGAAAAAGAGGCTCGCAGCCTGGTGCCG 61566 29 100.0 32 ............................. CTTGGCGATCTTGTTCGTGAGGTATTCGGAAG 61505 29 100.0 32 ............................. ATTGACCAGGCTTCCGCTGACCGACTGTTGAA 61444 29 100.0 32 ............................. GCACTGACACACGAGGAGCTTTGCCAGTTAGC 61383 29 100.0 32 ............................. ACTCCCTTCTTGCCTGCTTCCACTGCTCTGAT 61322 29 100.0 32 ............................. TTATCTCAGGATATGAGTAGAACAGCAAAAAA 61261 29 100.0 32 ............................. GTTTGTTTCTGTCTCTTCGCGCATTCCTTAAG 61200 29 100.0 32 ............................. AACGGGCGCAGATATCCATAGGTCCACGTAGC 61139 29 96.6 32 .........A................... TTACTGGAGATCTGATGCACTTGCGTTCAAAT 61078 29 100.0 32 ............................. AAGATCAACCCGCGGATGAACACATTGATGCC 61017 29 100.0 33 ............................. GCCAGTGAACAGCCTGGCGCTGTGGCTGAATAA 60955 29 100.0 32 ............................. GCGGTGAACTCAGTTGCAAGTGGGCAGGGTGA 60894 29 93.1 0 .............T..............A | ========== ====== ====== ====== ============================= ================================= ================== 13 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGCGATATCGCGGTGTTCTCAAAGGGCAATATTCAGCGCCTGGTCGGCGCGCTGGCGGAGAGCCATCGCCTCACGCTGCAAACGCGTTATCAGGTTGACTATATTGAAACGCTTTACGGCCTGGTGCGTTCCCGGCTGGCGGTGGCGATTCTGCCTGAGCTTTATACCACCCACCTTCAGGATCCGGCGTTAAAGGTGGCGCAACTTCAGCAGCCGGCGCTGACGCGAACCGTGGCGCTGATGCGCGGGCCGCAGCCTCTGCCGCCGCTGATAGAAGCGTGTTTTACATTATTACTGAGTTCGCTGCGGGAAGTGAATCTGTAGAGGCCGTTGCTCTCTCAGCTTGTTGTGGTGAAATGCGAGAGAGGTAACGGAATAGTTTGTTGTGCCTTTTAAAATCAAATAGTTATGGCTCTTTAAAAACATCAATTTGTTGCAAAAATGTCGGTAGATTGTTCTTGGTGGATAAATTTATTATAAAACAATAAGATATGGTTAGT # Right flank : CAGTCAATGTTTCCCGAACATGGTTCTAAAGAGTGTTCCCCCGCAGCTGGCCGCCGCGGGGGCTGATTTACGGCGTCACGATATTGAACCAGAACTCAAATTTATCCATATAGCCCAGCATCTCATCCAGCTTCGCGCCATCGCCGGTCACTTTCACTTCACCCTTATCTTGCGCCTGTTTTAGCGTTTCCTCTTTCAGGATGATTTTGTTCAGCGTGGCGCGATCCAACGCAATGGTAGCATCCGCGTCCTTGGCTTCGGCATCGGCGGTGTGGTTGAGCACGCCGTTTTCCAGCTCCAGCTTATATTTACCGCCATCGTTACCCAGGTCGATATTGAACACCGCTTTGGCGGTTCCGGCTTTCTCACCATTAATATGCACCGCAAGGTAATCGAAGAACATTTCCGGGGTCATCGCCCGTACGGTATCCGGGCTGGCGGTGTTCGGCGTCGGGCCTTTCACTACGCCGTTGCGTAGCTCCTGAGCGCCGGTCAGGTAG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //