Array 1 332571-335553 **** Predicted by CRISPRDetect 2.4 *** >NZ_NIRN01000001.1 Fusobacterium nucleatum subsp. polymorphum strain KCOM 1271 (=ChDC F305) F305_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 332571 37 100.0 35 ..................................... TTAACTAAGAAGTTCTTTGTTATAACTTCTGCTAA 332643 37 100.0 37 ..................................... TGGATAGAATAAAGTTACACCATCAACTTCTATTCTT 332717 37 100.0 37 ..................................... ATAAACTAGAAGATTCACAAGAAAGATATAATTTTGT 332791 37 100.0 39 ..................................... TTCTTCTACATCATCCATTGCTTCCTTCATTGTTTTTTT 332867 37 100.0 34 ..................................... TTGTGGTTTGACACGTTTAATAATTTCATTTTAA 332938 37 100.0 40 ..................................... AACCTTCTTTTAAACTCCAGTGAATCTTTATATCTTCATA 333015 37 100.0 38 ..................................... AACCCCAGCTGAACTCACAAGGATCAACTGGATTATAT 333090 37 100.0 39 ..................................... GCAAAACCTCTGTTAGAAAAGAAAAAGTAAAATTGAACT 333166 37 100.0 40 ..................................... TTGATCAATATCATTAGGCTCAACATTCATGTCAGCTTTT 333243 37 100.0 40 ..................................... ATAAAGATATAACAATAGTAGATTGTATGGCTTTTGTATC 333320 37 100.0 36 ..................................... TCAATATCATATTCATACTCAAATTTACCTAAAATA 333393 37 100.0 34 ..................................... GACTAAATGAGATTCATTCCTATAATCTTCTATA 333464 37 100.0 38 ..................................... TAGAGCCAGAACCTCCACCACCAGAGTTTCCACCTCCT 333539 37 100.0 37 ..................................... TCTAAGATATTCATTGCATAAGTTTCAAATCCAGGCA 333613 37 100.0 40 ..................................... AAGCATTATAATCGGTTGACATTACAAGTTCTTTAGTAAA 333690 37 100.0 38 ..................................... ACATTCAATTAGATTTTAATTACAACGAGTTACTTGGA 333765 37 100.0 38 ..................................... TAACAAATCCTTTTAAATATTTCATAATATCACTTCTC 333840 37 100.0 38 ..................................... AGTTATAGAAGAAGATAGACATTTTGTAGAACTAGAAA 333915 37 100.0 40 ..................................... TAGACATTCATTTAAACAGATATTCATTTCTTTTGGTAGT 333992 37 100.0 41 ..................................... TTGTACAAATAGTATCCTCCTGCTGCCACTGCTATTGCAGC 334070 37 100.0 43 ..................................... TAATTGAGAAGCTAATAAATTATCAGCTTCATTTATTACTTCA 334150 37 100.0 40 ..................................... CTCTATCTACATTATAATAGTAGATATTTTTATTTTCTTG 334227 37 100.0 40 ..................................... TAAATTTTCCATAATAAATACCTCCAAATAATTTTTATTT 334304 37 100.0 35 ..................................... CAAGTATAAGCTTGAGCCTCAGGTGGCTCATATCT 334376 37 100.0 38 ..................................... ATAAATACCTCCGATAATTTTTATTTAATCTTATATAC 334451 37 100.0 38 ..................................... TTGAACTTTAAGTAAATCTCTTAGCATAGTCTCAAGTT 334526 37 100.0 37 ..................................... AAAAAGTAGACGGAGTATTTACTTACTGTAGATTTAA 334600 37 100.0 37 ..................................... TTCCAATTGGAGCAGAATACCCATATTATCAAAGTAG 334674 37 100.0 39 ..................................... CGGCAAAAAATCTTTTAAGACTTTTCATAGTATTCCCCC 334750 37 100.0 37 ..................................... CTAATTGCCTTTGCTCCATTCTTTTGATATTGATATT 334824 37 100.0 35 ..................................... ACTTGCTTGATCCCAGCATTCTCTTAATTGTTTAC 334896 37 100.0 42 ..................................... TACCATATATCCTGTATTGGCAGTTTCTCCATTTTTATTTAA 334975 37 100.0 40 ..................................... AAAGATAGTTGCTATTCAGATTTAAGATGGGCTATTAATA 335052 37 100.0 38 ..................................... AAAAATGCTTTATTTGCTTTATTACTTTCTCCATTTTT 335127 37 100.0 40 ..................................... TTTTATATATGAATTGGCTAACATTTTCTTAAACCATTCG 335204 37 100.0 40 ..................................... TTAGTTTCCTTTTCTTTATTTCTGTATAAATCTTTTACTT 335281 37 97.3 42 ......G.............................. TTTCTAATACTTGTTGTTTGTTCATAGTTATACCTCCTTATT 335360 37 100.0 42 ..................................... CCAGAAATTCCCTCAAAGTGAAACAAATATTTTCTACTAAAT 335439 37 100.0 41 ..................................... TGAGAACTTATCAAGATATGTATTAGATACATATATCTCCA 335517 37 97.3 0 ....................................T | ========== ====== ====== ====== ===================================== =========================================== ================== 40 37 99.9 39 GTATTGAAGGTAATCCATTTATAATAAGGTTTAAAAC # Left flank : ATAAAAAAAGTATTCTTTTTTCTCCCAATAGCTGTCCCTTGAGTTGAAATGTATAGATCCATAGATATTTCCCCCTATATTAAAAAATTTTTTAAATGAAAAATGTAATAAATATGGTTAAAATAGTTTAAAATAATAAAAAAATAATTATATATTATATATTAACATATATATTAAAAATAAAATAGAAAAACTTTAATAAAATAAATATTCTTTTAGAAAAAAATGTTTACAAATTTATAAATATGTAGTATAATATAATAAATATAAAAACATTAGTGTAGAAAAAAGAGTATAAGGTCAATTTTTTAACATTTTATTTTTTTGTTTGTATTAAAAATTAAAATGCTCACTATTTTAAAAAGTTAAGAAAAAACAATAATAAATTTTTAGTACAAAACAGTTAAAATCCTCAAAATACGGAAAAATGTTCAATTTTTGCTACCATATAAAAAAGACTTCTTTCTACCATAAATACACCATCTATCCCTTTGGTAAGG # Right flank : TTTTTGAACTCCTATTATTGTATTAAAATTAATACAAATAAGAGTTTTTTTATGGTTGTTTTATTGCAAAAAATATATAAATTGTTATATAATGAGATATATAATTATTGGAGGTGGAGAGAAATGATTTCATTTGGTAAAAATATTCAAAATAGAAGAGTTGCACTAGGTTTAGATGTAAGTGAATTAGCACAACTTGCAAACTATGCTAATAAAAGTTATATAGAAAGAATAGAAGATGAGAAAATGTACCCATCTGCTAAAAAACTTCCAGATTTAGCAAAAGCTTTGTCTTGGAAAGTTGATGATTTATTTAAAAATGTTGAGCTTGAAGAAATTGAAACAGAGTATAGTTTAATACAAAATGCAATAAGATTTATTAAATCAATGGATAAAAAAGAAGTATCTTTAAAAACAGTTACTCTTTCAATAGATACATATAAAAAATATTATGCTTGTTTATTTGATAAATATATTAGAGAAAATTTTTTAAATAAGGT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTGAAGGTAATCCATTTATAATAAGGTTTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.68%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //