Array 1 6456-6260 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_RJFM01000014.1 Helicobacter pylori strain ZH39 14, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence          	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	=========================	===================================	==================
      6455	    25	 100.0	    35	.........................	GTAACAGCGCCACTTTAAGCTTTGATAATAGTAGT	
      6395	    25	  92.0	    32	..................C.C....	ATAGTGCCCAATCCACTTTTGAAAACAGCAAT   	
      6338	    25	 100.0	    29	.........................	ATGACAATACTAGCTTTAATAACGACACC      	
      6284	    25	  92.0	     0	...................GC....	|                                  	
==========	======	======	======	=========================	===================================	==================
         4	    25	  96.0	    32	TTCAATCAAGGCACTTATAATTTTA	                                   	       

# Left flank :   ACAATATTGAAAGCGGTCCTAATTCGCCCACGCACAACTCTTATTGTCTTTTTAGTAGCGCTCAAGGCTCTGGGACTTATTATTTGAACACCCTTACCACTTATAGCGCTGGTGGGGCTAGTTTCACGCAAAAATTCAATGGTGGCACGCTTGATATAGGGGGGAACATCCGCTTTGGAGGCACAGGTATTAATGGGGGTGATGTAGGCTATATCACTGGAACTTATGATGCGGCCAACATTTATTTGACAAGCCATTTAAAAACCGGAAACTCATACGCTGATGGTGGTGGGGCCACGCTCAATTTTAATGCAACTAATAACCTCACTATCAATCAAGCGAGCTTTGATAACAGCGATGCAGGGACACAAAAATCTTACATGAATTTTAAAGGCTCTAATATCAAGGTCAGTGGCTCTAGCTTTACAGACGACACGAATGGGGGTTTTAATTTCAGCGGTAATAACAATAATAGTGCCATCTCTTTCAATCAAACCAAC
# Right flank :  ACACCAGCAAGGTGAGTTTCTCAGGCATTAACACTTTAAATTCAAGTTCGCCTTTTGCTAGCCTTAAAGGCAGTGTGTCTTTTGGCTCTAATGCAATTTTTAACCTCAATCAAACCCTTAGCGGTAGTCAAACCTATGATATTCTCACTACAAACGGAGCGATCCAGTATGGGGTTTATCAAAGCTATTTGTGGGATCTAATCAACTATAAGGGCGATAAAGCCATTAGCCATGTTGGAGTGGGTAATAACACTTATGATGTAACCTTTGACATTAACGGGCAAGATGAAACCTTACAAGAAACCTTTAACAACCAATCCATTATTACCCAATTTTTAGGAGATGATTTACAACAACAAGCCCAAAAAACCTATCAAGAGGATCTCACTCATTCCCAAAACGCTTTGAATAATGTTACTAGCGACAATAAGATCGCAAGCAATGATACAAGCTACACTCAAAGCAAAAATACTACTATCGCTAAAGACGCTCAGAATTTA

# Questionable array : NO	 Score: 2.66
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     TTCAATCAAGGCACTTATAATTTTA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:76.00%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [2-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [60.0-63.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,0.41   Confidence: MEDIUM] 

# Array family : NA
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