Array 1 10661-13921 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPJW01000189.1 Ileibacterium valens strain NYU-BL-A3 NODE_3_length_53760_cov_244.837_ID_5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 10661 28 100.0 33 ............................ CACGAGTTCCATCAGATAACACCTCTGGAGTAA 10722 28 100.0 33 ............................ CACATTTAGCCAACCTTACCGCAACCCCGTTGC 10783 28 100.0 33 ............................ CCTCAGCCAATCCAGGAACTTTCGATCGATGAG 10844 28 100.0 33 ............................ CCATCCCAACATCGATCCATTCCTGGTAAGATA 10905 28 100.0 33 ............................ TGTGTCAGCCGAGGAGAACGGGTTTTAATCCTG 10966 28 100.0 33 ............................ TAAGTGCTTTGTTAAAAGAAACAATCTTTTAAG 11027 28 100.0 33 ............................ TTAATCCTACTGAGTGGATCAACTCACACGAAG 11088 28 100.0 33 ............................ GAAGTGCAACGCTTCTTTTTTTTGTGGAATTAT 11149 28 100.0 33 ............................ TGTTGATCTCGGACATTTTTGCCCGAAAGAAGC 11210 28 100.0 33 ............................ GGATGCATCCGATCTCAAAACGCTCCCACGGCA 11271 28 100.0 33 ............................ TACCAGCAAAAGCCATCTGCCCTGCGGTAGGGA 11332 28 100.0 33 ............................ CCAACAAGCAACCAACTCCTAACCAACAGCTAA 11393 28 100.0 33 ............................ CCTCTCAGCAGTTTTCAGAGTTGCTCGGCGGGA 11454 28 100.0 33 ............................ CGGCTTTTGCAGGTATAGCAGGAGCCGCCAACA 11515 28 100.0 33 ............................ CTCTTCATCGACGGCGATCAGCTCGCAATACGC 11576 28 100.0 33 ............................ TTTTTTGTTGGAATTCATGGTGAAGGATTTTTC 11637 28 100.0 33 ............................ GTATGTACAGACCTGAACTTGAAGTCTTAGGCA 11698 28 100.0 33 ............................ TCTGACAGCTTAACCGTTTTGACTGTGGCGTTA 11759 28 100.0 33 ............................ TGATGAAATACATGTCACCAGTACCGGCGATTT 11820 28 100.0 33 ............................ CAGGATCACGCAGGGTGAGCTTTTCCGGAAAAG 11881 28 100.0 33 ............................ TTACCTTGAAAACAAATTTTCTGAACTCTTTCG 11942 28 100.0 33 ............................ CGAAATAACCAAAAAATCAACTCGTAAATATAC 12003 28 100.0 33 ............................ TTAATGAAAAAAATTGATATGGATTCAAATAAA 12064 28 100.0 33 ............................ TTCGTCAAAGCCAAAGAAATGGTTTTCGATAAA 12125 28 100.0 33 ............................ CCACAGTCAAATCCCACGCTGGACTGTGGTATC 12186 28 100.0 33 ............................ ACATCCCACATGGAAATCCATGCGTGATTCTTA 12247 28 100.0 33 ............................ TATTACGACAGGGGTTGTTGGAGCAATCGCGGC 12308 28 100.0 33 ............................ CTAAATATTTCAAAGCTCCATCAGGAGATACTG 12369 28 100.0 33 ............................ CTGATGATTCTTTCGCTGATGATACATATGTCT 12430 28 100.0 33 ............................ CCTATCAGACCAGAAGATAACTTCAGAGCTTTA 12491 28 100.0 33 ............................ CCCTTTTCGATTCAGGATCTCCTTAAACTTCTG 12552 28 100.0 33 ............................ CTTAGCAACCACAAAATCAATCACAGTTAGATG 12613 28 100.0 33 ............................ AGACTTCTCTTTTCTCTTCTCCAACGGGTTTTA 12674 28 100.0 33 ............................ TGGTCTTTTTTAGGTGCCAGTCTCGTACCTCGT 12735 28 100.0 33 ............................ GAAAAGCTCGAAGCAACCGTTGCGCTGCTGGAT 12796 28 100.0 33 ............................ TTCGATAATTTTGTTCCAGCTGCCAAGCAGAAA 12857 28 100.0 33 ............................ TACTCTGTCAAAAATATATCGCTGTGCTATCCA 12918 28 100.0 33 ............................ TAAACCGATGAGAATATGGGGAAAACTAGATGT 12979 28 96.4 34 .........A.................. CTGAGTACGAAGGCATTGCCGTAATGGTTACGCA 13041 28 100.0 33 ............................ CAAGTTCGATTGGTTGGTGAATAACGAGGATTT 13102 28 100.0 33 ............................ CTCCATGAGTGAAGAGGAACGCAAGGCCTACAA 13163 28 100.0 33 ............................ CAAGCTGTATTCGACCGGATTTACCGCCAAGAT 13224 28 100.0 33 ............................ CAGACCACCTTTCCTCTTAGGGTCTGTCTCTGT 13285 28 100.0 33 ............................ TTTGATCCCGCTTGTGTTATCCAGAAAGCCCAG 13346 28 100.0 33 ............................ TGTTGCGGCCTACTTTGGAGTGACATTGATTTT 13407 28 100.0 33 ............................ TCTGCAGTTTTATCCGCTCAAATTTTTAGTCGT 13468 28 100.0 33 ............................ TTCAGGCAGAAGCACAGGAACATATGATTGAAT 13529 28 100.0 33 ............................ TTTTTATCTGATAGGCTAATGCGGTATACTGGA 13590 28 100.0 33 ............................ CCCGTTTGGGTTGCTTTGTGATTGTATGATAAC 13651 28 100.0 33 ............................ TTTCTTTCAGCTGGTCTTTGATGGGATACGTGT 13712 28 100.0 33 ............................ TATGGCGATACCGTCATTTTGCGGCCTTGTAAC 13773 28 100.0 33 ............................ GCTCTTCAATCCCACCCGATGAGAGCCGGATGA 13834 28 100.0 33 ............................ TTAACAAATCATGACTTGGTATATGGACTTTCA 13895 27 75.0 0 .....-...............T.TTCAT | ========== ====== ====== ====== ============================ ================================== ================== 54 28 99.5 33 GTTGTCCCCGCGTATGCGGGGGTGATCC # Left flank : AAAGGATTTGATCACTGAAATTGCTGCTGTGAAATTTGAAGAAAGTGGGGAAGTGGTAGATCGGTTTAAAAGATATATTTGTATCGACATATCAGTACCAGATAACATTCAAAAATTAACTGGTATTACTGATGAGTTATTGAAAAACGAAGGTGTTCAATTAGAAACGGCATTAAACGATTTGCAGATGTTTGTTGAGGAATTGCCAATAGTATGTCACAATGCAGAATTTGATATGGCATTTTTAAAAAACAAGGTATCTCAAGAATCTGAAATTTTAAAAACCAATCAAGTAGTAGATACATTAAATCTCTCCAGGAAGTTAATTAAGGATGTACAGAATTATAAACTACCTACATTAGCAAAATATTTTTCTATCGCTCATGCAGATTCGCATGAAGCATTGGTTGATGCGGAAGTAACGGGACAATTGGTAGCAAAACTAAAGATTTTAGAGATAAATAAATAAAACAGTACTTTATATAAGGGATCAAAATAGT # Right flank : TTACTTATAAGATCCAGACAAAATGTCTTTAGGTATATGTGACTGAATTGAAGTAACAGAATTGTCTTAAATTTGTAATGGAAGGATTGATGAGTAGATATACAAAAAAAAAGAGAATATGTGAGCCCCAAGGGATTAATATTTTATGATTTAAGGATTGTCATATTGACGGTACTCTAAATAATGTTTATGGAGCAATAAAAAAACGGTGCATAAGCACCGTGTCCTTATCAAAAAAATGGTGGAGCGTAGGAGGATCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTCCCAGCTGAGCTAACACCCCACATATAAAATATAAGAAGCAAAGAAATGGTGGGCCTGAATGGACTTGAACCAGCGACCTCACCCTTATCAGGGGTGCGCTCTAACCACCTGAGCTACAGGCCCATTTCTTAATGCCTGATTAATATATCAGATCGAAAGAATGTTGGCAAGTTTTTTTGTTTATTCAAGGAAATTATCTTTAAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTCCCCGCGTATGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCATGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C/E [Matched known repeat from this family], //