Array 1 2208625-2210766 **** Predicted by CRISPRDetect 2.4 *** >NZ_VOLB01000001.1 Halorhabdus sp. CUG00001 NODE_1_length_2617656_cov_150.948, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 2208625 30 100.0 36 .............................. TACGTTCTCAGTTACCTCGGGTGACTCTCAAATGAA 2208691 30 100.0 37 .............................. CCTCCTTGGATACGATGTTGACAAGCAAGGGTATATC 2208758 30 100.0 37 .............................. TTTGAGTCTGCACCGGATTTTGACACCCACACTTGTT 2208825 30 100.0 36 .............................. GGTCAGCAGAAGGTGCCAAGCAACTCAAGCACGATA 2208891 30 100.0 35 .............................. ACTCCACGGGAGAATATACTCAAATAACTCCGGTA 2208956 30 100.0 35 .............................. CATTCCGGGCTTCAGCGTATCTATAACCTGTTCGT 2209021 30 100.0 35 .............................. ATGATCGGGACGAACGGCGGGGAGAGCACGAGCCA 2209086 30 100.0 36 .............................. GTGATAGGCGAGGTTAGTCATCGGCGACCCCCTCGA 2209152 30 100.0 36 .............................. ACTTGCGCTAATGGTTTTGCCAAGTTCTTCCTGCTG 2209218 30 100.0 37 .............................. GTCGGCGGCTTTGTACCATTCACCCTCCTTTTTGAGT 2209285 30 100.0 36 .............................. CATTGACAAACGGAGACTCCCAATCAATGTTGCTGG 2209351 30 100.0 36 .............................. CCTTGTGGCGAGTCCGTCGTTGATGGATGCTCGCAC 2209417 30 100.0 35 .............................. ACGTAGACTTCCCGGACGTAGTACCCATCTGCCTG 2209482 30 100.0 35 .............................. CCCGCGATCATCCATATCATCCTCGGCGCTCTTGC 2209547 30 100.0 36 .............................. TGAGCAACCGGCGCGACTAATCGCACTCAAAGCATG 2209613 30 93.3 37 .....................A.......C GTCCCTGCCTCCGCTGCTCCGGGAGACAGTGAGACCG 2209680 30 93.3 34 .....................A.......C AACGACAGCGGACAGCATGAGCTACGATTTGCGT 2209744 30 93.3 36 .....................A.......C AACGTGAGTTTGAGATTAGCACTGAAAGCGACGTTG 2209810 30 93.3 36 .....................A.......C CAATCCTAACCACTGGCCTTGCAGTTTCGACTAAGA 2209876 30 93.3 35 .....................A.......C GAGACGTTGCCCACGTCAAAGTACGTCTCATTTGC 2209941 30 93.3 37 .....................A.......C CTGATCGGCGATCCGGGCGTCGGGAAATCCGTGGCGC 2210008 30 93.3 36 .....................A.......C GCACCAACTACCGATATATTGGCCAGTTTCGGCGTA 2210074 30 93.3 35 .....................A.......C GTCATCAATGAACCGGATGTAATCAGTCCCGAGCG 2210139 30 93.3 37 .....................A.......C GCACCGAAGGAAGCGGCCAAGAGACTTCGGAATAGAA 2210206 30 93.3 37 .....................A.......C GCTATCATCCATTATATCCGTCCGGCGGTTTTTGATG 2210273 30 96.7 37 .............................C TATCGGATGCTTTTGTCGCCCAGGCATCACACCCTTC 2210340 30 96.7 36 .............................C AACCGACCTTCGAGCAGTGTGCCTTCTGTGCTGGAA 2210406 30 96.7 37 .............................C CCCACGGAAACAATCTCAGACCTGAACGATGGGCTTG 2210473 30 96.7 36 .............................C CGCCCCTGTAAGTGTTTGGGTGTAGAGGTAGCTGTG 2210539 30 96.7 36 .............................C AAGAAAGTCCGTCTGTTGCCTGGGGACCGAACGGAA 2210605 30 96.7 37 .............................C TGCGACATCTCTTGCAGTTTATGTCGAAAACCTCCGT 2210672 30 96.7 35 .............................C GAGGACGGCCCGCTGGCCCTGCCACTGTTTGATTG 2210737 30 86.7 0 ......................A...C.CC | ========== ====== ====== ====== ============================== ===================================== ================== 33 30 96.9 36 GTTTCAGACGGACCCTTGTGGGGTTGAAGG # Left flank : CGATCGGACGATCGAACACCCTCGTCTTAACCGAAAGGTGAGCTATCAGTATCTCCTTCGAGTTGAGGCGTATAAACTCAAGAAACACCTGTTGACTGGCGAGCCCTACGAATCCTTCGAGCGGTGGTGGTAACGTGGTGTACGTCGTCGCCGTCTACGATGTCGAGGCGGATCGAACGCGCCTCTTCTTGAATTTCCTGCGCCGGTATCTGACTCACGTCCAGAATTCGGTGTTCGAGGGAGAGATCACGGAAGGCGATCTCGAAGAGATCAAGCGAGAACTCGATTCGATGTTGGAGGCCGGTGAATCCGTAATCGTCTACCGGATGAGCTCCGAACAGTACGTCTCGCGGACGGTCTATGGCGAAGACCCGACGGACGACAGTCACTTTCTATAGTGTCGTCATCGACCCCCCGGGTTTGAGGGGCCATTGCGGGTCGACGAAAATACTAACTCCCAGGCGCAGGTATGACGCTCTATATGGTCGATTTCGGCCATG # Right flank : CTTCACACGTCGTGTTTGTGCGGGCCACTGAGCGGTCGAGGGTGCTGAAACGAACTCGTGTCTTCGTCCAGGCCTACTGTTCCTGGTGCTGCCCCGAGCCACGTTCAAATACTAATATTCCTTAAAAGTGAGTCGTCTAGTTCTCTTTGGCGGCTTCGATCTCTTGGGTTGCTTCGAGGACGAGATCGTGTGCACCACCGTTCGAAGCGACCAGGCCCGTGCTGTCCGGTCCCCAGGCGTCGCCGTTCAGGTCTGTCACCGTCCCGCCGGCCCATTCGACCATCGCTGCACCGGCGATCGTGTCCCACGGGTTCGTTTCGAGATTCGTGATCGCGGCTTCGATCTCGCCGGCAGCGACGAGTGCGAGTGCCAGTTGTGTCGAGCCGACCCGCCGGAGATCACTGAAGCGCTCGACGACGGCACGCGCCGCGACGGCGAACTGCTCACGGCTGTCGAAGCCCCAGAAGTACGTCGGTGCGACCATGAACCCGCTCGGGTCG # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.66, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGGACCCTTGTGGGGTTGAAGG # Alternate repeat : GTTTCAGACGGACCCTTGTGGAGTTGAAG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.20,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //