Array 1 1176086-1178368 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAETUR010000001.1 Klebsiella pneumoniae strain CPO178 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1176086 29 100.0 32 ............................. TTTCTTGATGCTATGTTGAAGAAGATGAGGGG 1176147 29 100.0 32 ............................. ATTTGGCAGAGGCTGGTCGTGTCGATGTCGAA 1176208 29 100.0 32 ............................. ATACGTCTGTTACTTTGCTATTATTAGAAAGC 1176269 29 100.0 32 ............................. TTTCCTGTACTGTTCAGTTGCATAGTCCAGCA 1176330 29 100.0 32 ............................. AAATCGCAACGCACATCGAAGCCGGAAAAGTT 1176391 29 100.0 32 ............................. AATACACGGGCGTTCAGGTTAAATATTTTGAC 1176452 29 100.0 32 ............................. TGTCATACGACCTGGTAAACGACCGTTCCATG 1176513 29 96.6 32 ..A.......................... GTTTTGTCGACAAAGTACGTCTGCTCTCTTGA 1176574 29 100.0 32 ............................. GTTGTCAGTCAGGGAAAATCTATCCGCAGGGG 1176635 29 100.0 32 ............................. TGATTGTCGCTATACCAGCGCTCAAGGAAAAT 1176696 29 100.0 32 ............................. GTCAGATCACGTCAACCACGCTTGATTTTACC 1176757 29 100.0 32 ............................. CTCACTAACGCCGTTGCCTGCGATAGCTGATG 1176818 29 100.0 32 ............................. GTGATCGGCCCGGCAATGCGTGAGCTAATCAA 1176879 29 100.0 32 ............................. CGTTTAACGCAGTGCGAAAAATTACGACACCA 1176940 29 100.0 32 ............................. AACTGAATGTTCCAAATCCGGTTGGACGACCA 1177001 29 100.0 32 ............................. TTCAGCAGCGCGCTCGTCCCCCTCCTGTCGGA 1177062 29 100.0 32 ............................. CTCTACTACGATAACGGATCCCACGCGGGCTG 1177123 29 100.0 32 ............................. GCTGCCAGCCCATTCCGTAATTGCCTGTTTCA 1177184 29 100.0 32 ............................. CAGTAGCAGCCATCGCTGAGGTGAAGGGCTGG 1177245 29 100.0 32 ............................. GCGAATATAGGCATTAATGCTTTTAATAATAT 1177306 29 100.0 32 ............................. CTCCGTCACCAGTTCTGTGCTATCCGGCACAA 1177367 29 100.0 32 ............................. CTCGGTGACCGGCAGATCGTTTTGAAACACAT 1177428 29 100.0 32 ............................. CGTCTGGCGAGGTTTACGACGAGCTGACGTTC 1177489 29 100.0 32 ............................. TCACGTTTGCAGAACTCGCGGAGGAAGAAGAA 1177550 29 96.6 32 ..A.......................... AACGTAATTGGCTTACGGGGCGGTCGGCACAA 1177611 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 1177672 29 96.6 32 ..........................T.. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 1177733 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 1177794 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 1177855 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 1177916 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 1177977 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 1178038 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 1178099 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 1178160 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 1178221 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 1178282 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 1178340 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 38 29 99.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGAGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //