Array 1 141003-142031 **** Predicted by CRISPRDetect 2.4 *** >NZ_FPAQ01000002.1 Halomonas saccharevitans strain CGMCC 1.6493, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================================== ================== 141003 29 100.0 32 ............................. CATCCGCTACGCGGGCGACGCGTCCAACCGGC 141064 29 100.0 32 ............................. GACGAGGCCGAGCTTTGCCGCTGGGAGGGTGA 141125 29 100.0 32 ............................. GTGGCTGACGGCACGTGGCGGATGCGGAAGAA 141186 29 100.0 32 ............................. CAGCAGGCGGTGCACAAGATGGAGGGCTTGGC 141247 29 100.0 32 ............................. ATCGACAACACGGACAGCGTGGCGAGCGTGGC 141308 29 100.0 32 ............................. GTGTCGGTGGGCATGACTACCCCCTGAATAGC 141369 29 100.0 32 ............................. TCGTCGGTGGCATGGGTCTTCCACGGCGTAGA 141430 29 93.1 32 .......................A.C... CGGTGAGAACCTGACCCAAGCACACATGGAAG 141491 29 93.1 32 .......................A.C... GCGTCTGGGTCTCCGTTGCGGCGAGCTGAGAA 141552 29 89.7 32 .............T.........A.C... CTCGGCACCTCGGGCACCATCGCCACCGGCAC 141613 29 89.7 32 T.....T......G............... CAAACGAGCGATTGGCAAGGGTGGAGACTCGA 141674 29 93.1 56 ....C........G............... CCGCTGGTCGGCGCGCTGGTCGGCGCGCTGGTCGGCGCGCTGGTCGGCGTGCTCTC 141759 29 93.1 32 ...A.........G............... CGGGCCTGGGCCGATCACGCCGCATTCATGTA 141820 29 89.7 32 ...A........AG............... ATCATCGAGATCGCCACCAGCCTGCCCGAAGC 141881 29 89.7 32 ...A........AG............... ACGGCCATGCCGTGGCTGGAGACGGTGGACGC 141942 29 89.7 32 ...A........AA............... CAAGCGACCGAGAACGTCGCCGGCATGCTCAA 142003 29 82.8 0 .............G.AA......A....T | ========== ====== ====== ====== ============================= ======================================================== ================== 17 29 94.3 34 CCGGTCCCCGCAGCCGCGGGGATGATCCG # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTG # Right flank : TACGATGGGGAAGTCGCCCGCGTAGGCATCGAAATGGTCCCCGCAGAAGCGGAAACGACGAGGAGCGCCAGATTTCTGTTCTCCGGCGACACTGGCATCTGAGGGGCAAAGCTTGCCCGCCCGCTCGCCCCCTGCGCATGATGGGTGGGCGGTCGCCGTGCCGTTACTCGCGCCGCCTCGCCTACCGTGACCGCCATCAAAGGGAGAAACTCCGTATGTCCGAGCGCGTGATCCTCACTACCTCCTCGCACCTCGAGGGCTACCGGGTGACCGAACACATCGACATCGTGTCCGCCGAATGCGTGTTCGGCATGAACGTTCTCAAGGACATGTTCGCCGGCTTTCGCGACTTCTTCGGCGGGCGCAACAAGTCATCCCAGGATGCGCTGCGCGATGCTCGCGTGTCCTGCCTGGACGAGTTGCGCCGGGAGGCCGAGTCGATGGGTGCCAATGCCGTCATCGGCATCGATCTCGACTACAGCGAGATCTCCGGCGGCGGC # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:-0.04, 8:1, 9:0.64, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGGTCCCCGCAGCCGCGGGGATGATCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [1.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //