Array 1 9135-10488 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ956540.1 Fusobacterium equinum strain CMW8396 Scaffold69, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 9135 29 100.0 38 ............................. GTGTAGAAGGAGATGATTGAGATGGAAAAGTTAGAAAA 9202 29 100.0 37 ............................. GTTAGCAAAACAAGGATGAAGACAAGAAATTACGTTT 9268 29 100.0 39 ............................. GTTTTACTATTAAGAAAATTTATTCAAGTATTGTAGAGA 9336 29 100.0 38 ............................. GTTAACTGTGGGGATAGTAACGACTGTATTTTGATTAT 9403 29 100.0 38 ............................. GGCATAATGGTGTATATAATTTTTATTTGTTCCAATAA 9470 29 100.0 37 ............................. GTTTACAAACACATGATATGGGCTTGGTCTGTCTTTT 9536 29 100.0 36 ............................. GTTTTCCAAGTTTATTTTACAAGAATTTGTAAATTT 9601 29 100.0 36 ............................. GGTGCTTTTTTTAATTTTTTCGGAATTGGTACTCCA 9666 29 100.0 38 ............................. GTTCTTGTTCTGTTGATAGATCTGTCTTTATATTTTTT 9733 29 100.0 37 ............................. GACATTACATTCTGCTAAAATTTTAGCCAAATTTACA 9799 29 100.0 36 ............................. GTAACCTGTTGTTTGCACAGCTGCTAAAACAACTTC 9864 29 100.0 37 ............................. GTTTTCAAATCCCCAATTCGTACTTCTTTCTTTTCTC 9930 29 100.0 37 ............................. GTCTTTTTAGAATAAAAAAATAAACTTATCTCACACT 9996 29 100.0 37 ............................. GAAAGAATTTGAGCTTTTAAAAGAATTAAATGATAAC 10062 29 100.0 37 ............................. GATGAAAATCAATGGGAAATTGGGATTGAATAAAATC 10128 29 100.0 38 ............................. GAAAACAAATAAGAAAATACGATATACAGGATATGTAC 10195 29 100.0 38 ............................. TAAAGTTCCTTCTATCAAAGGAGCTAAGGCATCTCCAA 10262 29 100.0 37 ............................. TTGGGGAATTGGAATAGGGAGAGCAAATAAGCATTTA 10328 29 100.0 36 ............................. TAGTATGTCATTTCTACTGAATAATTCTGCATGTGT 10393 29 100.0 38 ............................. TAATGCTTTATAATAGGAACTGATGTAGTCTTGATAAA 10460 29 82.8 0 .......................G.GGGT | ========== ====== ====== ====== ============================= ======================================= ================== 21 29 99.2 37 ACTTTAATAGAAACACATTGAAATGTAAA # Left flank : TTCCTGTATATCAACAAAACATTGAGGAAATTCGTAAAATAGAAGAAAAGTTGAAGCTACCATTAAATTCTCAAATGAGTGAAAACATGGAAGAAAAAAGTATTTCAAAAGAAGAAAGAATTCTTTGTCGAGAGAAATTGATGCAATATACTTTGAGCGTAGAGTCTTATCTTCTTAAAGGAGCTAACATAGAAAAAAAGATAACGATAAACTCTTATCAAGAGATAAAGGTAGTTTCTTGTGAGTATGATTCTTTGATAGGATTAGGGAAAATAATTAAAGAAAAAAAAGGATAAATAGGATAGAAAAGAAAATTAGAATCTGTCGACCATTGATTGTGTAAATTTCCTAGGGTATCGACAAACTTAATTTTAATAAGAGTTTATGGAGATTTTTTTACATTTTCCTTTTTTAAAACAATAAAAAATAATCATACTACAACTAGGTAGACAAAATTGACATTAAAAATCCTTGGAAATAAAATACTTTTCTTTAGTCGG # Right flank : TGTAGAAAAAAGTCTGTAAATTGTTAAAAAATATAGTCTTCTATGATAGAATATTAAATATCATAGAAGGCTATTTTTATGAAAGAGAAAAAAGAAGTGTACAAAGTGAAACCATTAACCGAAGGAAAGAAAAATATCATCGCCACTCTCATAGAAGAATACGATATTAAAACGGCGCAGGATATTCAAGAAGCATTGAAAGATCTTTTAGGGGGAACCATTCAATCGATGCTAGAAGCTGAGATGGAAGAACATATTGGTTATGAAAAATATCAACATTCGGACGCCGCAAACTATCGTAATGGTACGAAAAAGAAAAATATTCGTTCTACTTATGGGGAATTTCAAGTAGAAGTTCCTCAAGATAGAAATTCTTCTTTTGATCCTAAAGTTGTAAAAAAGAGATAAAAAGATATTTCTGAGATTGATCAAAAAATCATAAATATGTATGCACGTGGATTGACTACTCGACAAATATCTCAACAAATGGAAGAAATCTA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ACTTTAATAGAAACACATTGAAATGTAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [71.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 1 1346-1708 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ956572.1 Fusobacterium equinum strain CMW8396 Scaffold217, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1346 30 100.0 37 .............................. AGCAGATGGCACACATGGAATAAAAACGAATGGGTAG 1413 30 100.0 36 .............................. GCGTTAAAAAATTGGATAAATAAAACAGTTAAGTTG 1479 30 100.0 36 .............................. ATACCAGGAACGAGTTTGTGCATAAGAGAAGCTCCG 1545 30 100.0 37 .............................. CACAAACAACTAAAAAAGTATTTTTAACAAACAACTA 1612 30 100.0 37 .............................. TACTATTGGATTATTGACTAATTCACTCAACAACTAT 1679 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 6 30 100.0 37 ATTAGAGTAAAACTAAAGTAGAATGTAAAT # Left flank : ACTGGTTGTTTTTCTTTTGGTATATAAAACAAATATTAGAAACAACCGTTATTTGTATGTGTTTGTTTTTCGGATTTTTGATTTTTTAAAGAAGAATAGTGCCAAACTCATCACTGTGCAGTCTTAGTCTGTGCAGTGATTTTTTTATTTCTTTGATTTTCTCGTTCTTTTTGTCGGTGTTCAAAAAAATATTTTTTGTGCATATACTCCTAAAGTGTGCAGTGTTAAATCCAGATCCAAAAAATAAAAAGAGGCTCTTCCAAGCCCATTCGAACAAACTTCCGAACATTTACGAAGTTTCTCATTTTTTCTCAAAATCGTTGCACGTTTTCACATTTTTTGTATCATTTTTTCTCATGTATTCTCATTTTCTTTTACAGCATTTTTTCCACTTTATTTTTCTTTTCTCTTTATATTTCAATAGCTTTTCTAAAAATATTTTCTCCATTTCTCAAATTCTCATAATAAATACCCCCTTACAAAAAAACACAAACAACTAA # Right flank : TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTGATTAGAGTAAAACTAAAGTAGAATGTAAATCTGAAAAACTACAACAACAAACAACTAAACAATCTATATTAGAGTAAAACTAAAGTAGAATGTAAATAGAAAATTACTTGGATTTTCTAACAATTCAATATTTTATTAGAGTAAAACTAAAGTAGAATGTAAATATGTTTTTCGTTAGCTCTTTACGTTCGCTATTTATTGATTAGAGTAAAACTAAAGTAGAATGTAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATATTAGAGTAAAACTAAAGTAGAATGTAAATATTATTCACGGTTTGCGTTTCTCAGAATGAG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAGTAAAACTAAAGTAGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 2 1813-2043 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ956572.1 Fusobacterium equinum strain CMW8396 Scaffold217, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1813 30 100.0 37 .............................. CTGAAAAACTACAACAACAAACAACTAAACAATCTAT 1880 30 100.0 37 .............................. AGAAAATTACTTGGATTTTCTAACAATTCAATATTTT 1947 30 100.0 37 .............................. ATGTTTTTCGTTAGCTCTTTACGTTCGCTATTTATTG 2014 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 4 30 100.0 37 ATTAGAGTAAAACTAAAGTAGAATGTAAAT # Left flank : AATACCCCCTTACAAAAAAACACAAACAACTAAATTAGAGTAAAACTAAAGTAGAATGTAAATAGCAGATGGCACACATGGAATAAAAACGAATGGGTAGATTAGAGTAAAACTAAAGTAGAATGTAAATGCGTTAAAAAATTGGATAAATAAAACAGTTAAGTTGATTAGAGTAAAACTAAAGTAGAATGTAAATATACCAGGAACGAGTTTGTGCATAAGAGAAGCTCCGATTAGAGTAAAACTAAAGTAGAATGTAAATCACAAACAACTAAAAAAGTATTTTTAACAAACAACTAATTAGAGTAAAACTAAAGTAGAATGTAAATTACTATTGGATTATTGACTAATTCACTCAACAACTATATTAGAGTAAAACTAAAGTAGAATGTAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTG # Right flank : TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATATTAGAGTAAAACTAAAGTAGAATGTAAATATTATTCACGGTTTGCGTTTCTCAGAATGAGAAATGCATTAGAGTAAAACTAAAGTAGAATGTAAATACATATATAAGGGGGGATAAGGATGACAAAGAATCAATTAGAGTAAAACTAAAGTAGAATGTAAATAAGAAAGGCTCTACAAGGATATAGGTATCTTTGCTAATTAGAGTAAAACTAAAGTAGAATGTAAATATGTCTGCGGACCAGCGACAGCAATTGGAAGTAGAAATTAGAGTAAAACTAAAGTAGAATGTAAATGGTATATTATATCGAAAAAATAAAGAGGGAGAAATTCATTAGAGTAAAACTAAAGTAGAATGTAAATCAAGACTGGAAAATACTATATGTTGTAATCGCTG # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAGTAAAACTAAAGTAGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [5.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 3 2705-2214 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ956572.1 Fusobacterium equinum strain CMW8396 Scaffold217, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 2704 30 100.0 35 .............................. TTAAAAATAGCTGGAAACACAGCTCAAATATTATT 2639 30 100.0 35 .............................. TGATTAAATATCATCCTTTCAAAGATAGACTTGAA 2574 30 100.0 36 .............................. TCCAGCGATTACAACATATAGTATTTTCCAGTCTTG 2508 30 100.0 37 .............................. GAATTTCTCCCTCTTTATTTTTTCGATATAATATACC 2441 30 100.0 36 .............................. TTCTACTTCCAATTGCTGTCGCTGGTCCGCAGACAT 2375 30 100.0 36 .............................. TAGCAAAGATACCTATATCCTTGTAGAGCCTTTCTT 2309 30 100.0 36 .............................. TGATTCTTTGTCATCCTTATCCCCCCTTATATATGT 2243 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 8 30 100.0 36 ATTTACATTCTACTTTAGTTTTACTCTAAT # Left flank : TCATTTTAAATCAACAAACCATAGAGTTGATTTAAGAATTTACATTCTACTTTAGTTTTACTCTAATATGTACTTCGTATCATAATAACGAAAACTCACTCCATTTACATTCTACTTTAGTTTTACTCTAATTAAAAAATTTTACTGCTAATGAGCTTAATTTTTTAAATTTACATTCTACTTTAGTTTTACTCTAATGCTTGTTTCCTCCTTTTTATTTATTAAAGCCTTATTATTTACATTCTACTTTAGTTTTACTCTAATCAATTACTGCTAACACAAACATGAAAATTCCTATTTATTTACATTCTACTTTAGTTTTACTCTAATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTTACATTCTACTTTAGTTTTACTCTAATTAATTTTTCTTAGTTTTTTATCTATTAGCTTGTATAT # Right flank : GCATTTCTCATTCTGAGAAACGCAAACCGTGAATAATATTTACATTCTACTTTAGTTTTACTCTAATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTACATTCTACTTTAGTTTTACTCTAATCAATAAATAGCGAACGTAAAGAGCTAACGAAAAACATATTTACATTCTACTTTAGTTTTACTCTAATAAAATATTGAATTGTTAGAAAATCCAAGTAATTTTCTATTTACATTCTACTTTAGTTTTACTCTAATATAGATTGTTTAGTTGTTTGTTGTTGTAGTTTTTCAGATTTACATTCTACTTTAGTTTTACTCTAATCAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTACATTCTACTTTAGTTTTACTCTAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [70.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 4 2941-3567 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ956572.1 Fusobacterium equinum strain CMW8396 Scaffold217, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2941 30 100.0 36 .............................. AATAAGGCTTTAATAAATAAAAAGGAGGAAACAAGC 3007 30 100.0 36 .............................. TTAAAAAATTAAGCTCATTAGCAGTAAAATTTTTTA 3073 30 100.0 35 .............................. GGAGTGAGTTTTCGTTATTATGATACGAAGTACAT 3138 30 100.0 36 .............................. TCTTAAATCAACTCTATGGTTTGTTGATTTAAAATG 3204 30 100.0 38 .............................. ACAGCAATTTTACCTGTTTTTACTTTTCCAAAATCTAA 3272 30 100.0 37 .............................. GTTATTGTGATAGTAACATTAGGGATTGTAGCGTTTA 3339 30 100.0 36 .............................. AGTTTTTACAAAACTTATCCGAAAAAAAACGCCCCC 3405 30 100.0 37 .............................. GCTAATTTTTCAGGCTTTGATACAAACAATTGGAAAA 3472 30 100.0 36 .............................. TTTGTAAAAAATCTCGGTATCTACCGTCTCTTTTTG 3538 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 10 30 100.0 36 ATTAGAGTAAAACTAAAGTAGAATGTAAAT # Left flank : TGGTATATTATATCGAAAAAATAAAGAGGGAGAAATTCATTAGAGTAAAACTAAAGTAGAATGTAAATCAAGACTGGAAAATACTATATGTTGTAATCGCTGGAATTAGAGTAAAACTAAAGTAGAATGTAAATTTCAAGTCTATCTTTGAAAGGATGATATTTAATCAATTAGAGTAAAACTAAAGTAGAATGTAAATAATAATATTTGAGCTGTGTTTCCAGCTATTTTTAAATTAGAGTAAAACTAAAGTAGAATGTAAATATATACAAGCTAATAGATAAAAAACTAAGAAAAATTAATTAGAGTAAAACTAAAGTAGAATGTAAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGATTAGAGTAAAACTAAAGTAGAATGTAAATAAATAGGAATTTTCATGTTTGTGTTAGCAGTAATTG # Right flank : TANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTAGAGTAAAACTAAAGTAGAATGTAAATGGAGATTTACCAGGTAAAAAAAGAATACTACTAGGATTAGAGTAAAACTAAAGTAGAATGTAAATGATACTCTTTCCGAATCTTCTTCAAATACTTTGTTAATTAGAGTAAAACTAAAGTAGAATGTAAATTTGAACATCAAAGCCCCATTGATAGACATAACCTTATTAGAGTAAAACTAAAGTAGAATGTAAATAAAAATTAGGGACATTTAACTATTTTCCCATGAATTTATTAGAGTAAAACTAAAGTAGAATGTAAATTAAGAAGAAAAAAGCATGGATTCAGAAAAAAGGATTTATTAGAGTAAAACTAAAGTAGAATGTAAATTAGAAATCTAGCAACTTACAGAGCAGTTAAGGTAAATT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAGTAAAACTAAAGTAGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 5 3667-4093 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ956572.1 Fusobacterium equinum strain CMW8396 Scaffold217, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 3667 32 93.8 33 NN.............................. GGAGATTTACCAGGTAAAAAAAGAATACTACTA 3732 32 93.8 34 GG.............................. GATACTCTTTCCGAATCTTCTTCAAATACTTTGT 3798 32 96.9 33 .A.............................. TTGAACATCAAAGCCCCATTGATAGACATAACC 3863 32 100.0 35 ................................ AAAAATTAGGGACATTTAACTATTTTCCCATGAAT 3930 32 100.0 35 ................................ TAAGAAGAAAAAAGCATGGATTCAGAAAAAAGGAT 3997 32 100.0 33 ................................ TAGAAATCTAGCAACTTACAGAGCAGTTAAGGT 4062 32 78.1 0 AA...C....................T..CCG | ========== ====== ====== ====== ================================ =================================== ================== 7 32 94.7 34 TTATTAGAGTAAAACTAAAGTAGAATGTAAAT # Left flank : TTCTTAAATCAACTCTATGGTTTGTTGATTTAAAATGATTAGAGTAAAACTAAAGTAGAATGTAAATACAGCAATTTTACCTGTTTTTACTTTTCCAAAATCTAAATTAGAGTAAAACTAAAGTAGAATGTAAATGTTATTGTGATAGTAACATTAGGGATTGTAGCGTTTAATTAGAGTAAAACTAAAGTAGAATGTAAATAGTTTTTACAAAACTTATCCGAAAAAAAACGCCCCCATTAGAGTAAAACTAAAGTAGAATGTAAATGCTAATTTTTCAGGCTTTGATACAAACAATTGGAAAAATTAGAGTAAAACTAAAGTAGAATGTAAATTTTGTAAAAAATCTCGGTATCTACCGTCTCTTTTTGATTAGAGTAAAACTAAAGTAGAATGTAAATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : AAAAATTAGTACTGAATAAAATTCTAAGAACTCTTATGAATAAAAAGCAAAGAAATAAGAACGAAAGATACATATTCGTTTAAGATATTTTTCCAAAAAATAAAAATGGCGGTAGTAGAAGGATTCGAACCCTCGACACCTGGTTCCGAAGACCAGTGCTCTATCCAGCTGAGCTATACTACCGTTTGACTATTAAATTCCATTACTTAATTATAATATCATAAGTTGTTACTTTTTGCAAGTTTTTCTTTTTTACTTTTTTCTATGGTAAATTGCAACTATAAATGTCACGTTAT # Questionable array : NO Score: 3.00 # Score Detail : 1:0, 2:0, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTATTAGAGTAAAACTAAAGTAGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:81.25%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [4-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //