Array 1 4645-5283 **** Predicted by CRISPRDetect 2.4 *** >NZ_WUMF01000002.1 Klebsiella michiganensis strain 1305118 NODE_2_length_604700_cov_23.8428, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4645 29 100.0 32 ............................. GTTCAGACCGCGCAGGGATCCGGCCTGACTGA 4706 29 100.0 32 ............................. GTCGTAACCGAAGCCGCGAGACATCCGAACCC 4767 29 100.0 32 ............................. CCTCAGAATTCTGCTTGCCCCACAGATACGCC 4828 29 100.0 32 ............................. CGGCATTTACCCCTATTCAACATGGCCTACTA 4889 29 100.0 32 ............................. CAGATTTTCCGGCTCGAACATCAGAACGTTTG 4950 29 100.0 32 ............................. TTGAGTAATTCTTCTCTGGTTAATTTGCTGGT 5011 29 100.0 32 ............................. CGCCGTTCGTGCAGATTGCCGCCCACGTAGAC 5072 29 100.0 32 ............................. AGCTCGGCGGCATGATGCCCACAGAGGAGGCC 5133 29 100.0 32 ............................. ACTCGCTGCATTCAAGGTTCTGACACTGGTGA 5194 29 93.1 32 ..........................A.C CAGTTCTACACGCCCGTTGAGTTAGGTAAGAT 5255 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ================================ ================== 11 29 99.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GCGTGATATCGCGGTGTTTTCAAAGGGCAATATTCAGCGTCTGGTCGGCGCGCTGGCGGAGAGCCATCGCCTCACGCTGAATACGCGTTATCAGGTTGACTATATTGAAACGCTTTACGGCCTGGTGCGTTCCCGGCTGGCGGTGGCGATTCTGCCTGAGCTTTATACTACCCACCTCCAGGATCCGGCGTTAAAGGTGGCGCAGCTTCAGCAGCCCGCGCTGACGAGAACTGTGGCGCTGATGCGCGGGCCGCAGCCTTTGCCGCCGCTGATAGAAGCGAGTTTTACAGTATTACTGAATTCGCTGCGGGAAGTGAATCTGTAGAGGCCGCTGCTCTCTGAGCTAGTTGTGGTGAAATGCGAGAGAGGTAAAGGAATTTTTTTTGTGCCCTTTAAAATCAAATGGTTATGGCTCTTTAAAAAAATCAATTTGTTGCAAAAATGTCGGTAGATTGTTCTTTGTGGATAAATTTATTATAAAACAATAAGGTATGGTTAGT # Right flank : ACAGTCAATTTTCCCGAACATGGTTCTAAAGAGTGTTCCCCCGCAGCTGGCCGCCGCGGGAGCTTATTTACGGCGTCACGATATTGAACCAGAACTCAAATTTATCCATATAGCCCAGCATCTCATCCAGCTTCGTGCCGTCGCCGGTCACTTTGACTTCACCCTTATCCTCCGCCTGTTTTAGCGTTTCCTCTTTCAGGATGATCTTATTCAGCGTGGCGCGATCCAGCGCGATGGTAGCGTCGGCGTCTTTGGCTTCGGCATCGGCTGTGTGGTTGAGCACGCCGTTTTCCAGCTCTAGCTTATATTTACCGCCATCGTTACCAAGGTCGATATTGAACACCGCTTTGGCGGTTCCGGCTTTTTCGCCGTTGATGTGGACCGCAAGATAGTCGAAGAACATTTCCGGGGTCATGGCCCGCACGGTATCCGGGCTGGCGGTGTTCGGCGTCGGGCCTTTCACGACGCCGTTGCGTAGCTCCTGCGCGCCGGTCAGGTAG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 53393-56227 **** Predicted by CRISPRDetect 2.4 *** >NZ_WUMF01000010.1 Klebsiella michiganensis strain 1305118 NODE_10_length_237016_cov_25.2965, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 53393 29 100.0 32 ............................. GGATAATTCGGTGTGTTGAGTACAAAGGTATT 53454 29 100.0 32 ............................. GGACCGCCCCGCAGGCGCTGCTCGATAAAGTC 53515 29 100.0 32 ............................. GCTGCTGCTTCTTCCAGGTTAATTCCAAGCCC 53576 29 100.0 32 ............................. CCATTTTCGGTTGCATTAGTATTGCTCTCCAC 53637 29 96.6 32 ............................A ACTACCCGTTGAAGTCCAGCTATCGCGAGCAC 53698 29 100.0 32 ............................. TATTCGCAAATATATCCTTTGCTTCTGCCGCA 53759 29 100.0 32 ............................. TGGTATCGCTGGATTCGTGCCGCTGGAGCTTT 53820 29 100.0 32 ............................. TTATAACGTGTACGGATATCTTTTTGAGTAAT 53881 29 100.0 32 ............................. AGGCGTATGATGATGTTGGTGATTTCCCATTC 53942 29 100.0 32 ............................. ATTTTTCCAGCGCTACTCTTACATCTACTTTG 54003 29 100.0 32 ............................. GTTAACCTCAACGGGAAGAAAAAATGGGCTGA 54064 29 100.0 32 ............................. CCTGCACTGCATTTGGGCCCATCATCACGCAT 54125 29 100.0 32 ............................. TTCTTCATCAGTGCGGCATTCATATCTGCAAC 54186 29 100.0 32 ............................. TCGCTTACGAAGCGAAAGTAAGGGCGTTCGTC 54247 29 100.0 32 ............................. TTCGCGCCCGCCGTCAACCTGCGGTCTGGATG 54308 29 100.0 32 ............................. CTGGGAGGAATTTCACGGACCACTTTCTGGAG 54369 29 100.0 32 ............................. GATAACGGTGGTAGTTTCTGCGGACAGTCCGA 54430 29 100.0 32 ............................. ATACGAAATCGCCTGGAGCAACGTTAACAGAA 54491 29 100.0 32 ............................. AGGCGGTAGACAGCAAGGGCGCATTCGATACC 54552 29 100.0 32 ............................. GTGGCAGTGCTTGCCATCGCCCTCACTGGTTG 54613 29 100.0 32 ............................. CGTCGATAGCGGTCCGAGGGCTCCTTGGTACA 54674 29 100.0 32 ............................. TGCGCGTGTACCGGCGGCTCTTTGCCATCTTC 54735 29 100.0 32 ............................. GACCAGAGCCGAGCGCATCAGAAGAACGAGAA 54796 29 100.0 32 ............................. CTCAGACAAGTCTATTGTGTGGGCGGGGTTAT 54857 29 100.0 32 ............................. CAGCTGGCGCTGAGCTGGTAGAGGCGCTGGAG 54918 29 100.0 32 ............................. GAGCACCACCAGTTCCCGGGTCAGGGTATGCA 54979 29 100.0 32 ............................. CGGCTTGGTCGTATTCTCAATGACCACATTGT 55040 29 100.0 32 ............................. GAAAGGCGCACAGGCTTGGCATTCCAACGATA 55101 29 100.0 32 ............................. GCATATTCTCCATGCAGGTGAATACAACGGCC 55162 29 100.0 32 ............................. CCCAGACCGTTGACGTTTTTCAGCGCGTACTC 55223 29 100.0 32 ............................. ATTCGACAGTCAGACATCAACAACGCCTTTCG 55284 29 100.0 32 ............................. TCAGGTGACTTTTTCGAGCTCGCTCCTGAAAC 55345 29 100.0 32 ............................. TCTGCACCACTGTGAACGCCTTTGGTGATTTC 55406 29 96.6 32 ............T................ AGCGCATTCAGAAACGGATAGCTGAGCTCATG 55467 29 96.6 32 ............T................ TTATTCGTGCCGATGTGGTGCTGGCGCGCATC 55528 29 96.6 32 ............T................ ATTGCTTTGCTTACTGTTCCGAAATGAGACGA 55589 29 100.0 32 ............................. GCTGTATACGGGAGGATGGGATGACAGAAATC 55650 29 100.0 32 ............................. GCTCAGTGTAGAAGCCGCTATTACCGCTATAC 55711 29 96.6 32 ............T................ CTTCTCGCAGTAGCCTGAGCGGTCGGTTGTTG 55772 29 100.0 32 ............................. CGCCAGCGATAACGGCCAGCAACGCAGTTGCC 55833 29 100.0 32 ............................. ACATCGTTAGCGCAATGAAGTTAGCGAAAAGA 55894 29 100.0 32 ............................. ATCCACCCCATGTTTTAGGGCAGTTCGCCACG 55955 29 100.0 32 ............................. CGCGTCAGCTTGCTTTTCTGGTTCGCCGGTAA 56016 29 100.0 32 ............................. TTGAGCAACGCATCGACCTGAACGAGTTGTTA 56077 29 100.0 32 ............................. GTTTCCCTGCAATAGTCCGGGGATCGGCCTCA 56138 29 100.0 32 ............................. GCCATTGACCGCAACTGGAATGACCTCAATCA 56199 29 93.1 0 .............G......A........ | ========== ====== ====== ====== ============================= ================================ ================== 47 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTCGCAGCTGGTGAGATTGAGCCACCTCAGCCAGCGGCGGATATGCTGCCACCGGCAATACCAGAACCGCAGCGACTTGGCGACGGCGGGCATCGGGGAGGTGGGGGATGAGTATGGTAATTGTTGTTACGGAAAACGTGCCGCCGCGTCTGCGAGGACGGCTTGCCATATGGTTACTGGAGATTCGAGCCGGTGTGTATGTTGGCGATATCTCAAAACGTGTGCGGGAGATGATTTGGCAACAGATTACGCAATTAGGCGGAGCTGGAAATGTTGTTATGGCCTGGGCGACGAACACAGAATCAGGTTTTGAGTTCCAAACCTGGGGTGAAAATCGACGTATTCCGGTAGATTTAGATGGTCTGAGATTAGTTTCTTTTCTTCCCATTGAAAATCAGTAGGTTATAAGTTCTTTAATAAAAAGGAATTGTTGAACTTAAGTTGGTAAATTGTTGCTGCCTGAAAATTATAATAGAAAACAAATATATATATTTAGA # Right flank : GCCCGGAGGAAACGTGGCAACAGTTCAATACACGTGTTCCCCACGCCGCCATCCTTATTATCCTGTACTTTATTTTTTCCCATCATTCTTTAGTGTGGCAAAGTCCGGTTCCAGACAATACTTGCCGAAATTTTCGGCTCATGGGAACTGTGCGCTTTTTTTAACATAGCGCTTATACAGACGTTTTACCGATGCTGGGTCCCGAGCCCAAATCCAACCCGTCCTGCCAGACGCGCTGCCAGATATAAACCTGGCTGTCGGCGATGGATCGCGTGCTGGCAGCCAGTAGCAACAATGGTATTAAAAAATGAAAATGCATCATGGCGACAGTCCTTGTTGCCGGATTTTATCGTTGTCTATTTTGAGGCGGGTCTCTTCTCCGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACTTTCATCACGTCGCGTCCGCGATGCTCAATACGCCCCGGCAGCGCTTTATCAATATACTGTAGGTTATCCAGCTGTACGTCATG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //