Array 1 356874-358122 **** Predicted by CRISPRDetect 2.4 *** >NC_008526.1 Lacticaseibacillus paracasei ATCC 334, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 356874 28 100.0 33 ............................ CTTCTCTGACTGGCTTACCGCTTCTTTGCATTT 356935 28 100.0 33 ............................ CGCTTTTATAACATTTATGCCGCATAAAAACAC 356996 28 100.0 33 ............................ CTGGCGACAATTCGATTTCTAAACGTACTACCG 357057 28 100.0 33 ............................ CTGGCGACAATTCGATTTCTAAACGTACTACCG 357118 28 100.0 33 ............................ CCAGCCATTGTAATTCCTCCTAATGCGAATTTC 357179 28 100.0 33 ............................ CGCGTTTGATGATGGCAGCGCGGCAACTTTAAC 357240 28 100.0 33 ............................ TCAAAATCGCGACCTGGTTCAAAATGCGGCTGA 357301 28 100.0 33 ............................ TGCTCGTGCGGTGTCTGGAGTTGCTGGCAAGTA 357362 28 100.0 33 ............................ CTATATTTAGCTCAATTGCAACAAGAGGGCAAA 357423 28 100.0 33 ............................ CGACAATAACGAGCTTGCGCTGATGGCAACTTT 357484 28 100.0 33 ............................ CAAGCGAGTCCGATCCTCCCGTATTGTGAGCAT 357545 28 100.0 33 ............................ TGGCTGTTAGTTTGGCCAGTGTTATAAGCCGCA 357606 28 100.0 33 ............................ CAACTGGTGCGGTAATCGGGCGGAAATTGTTAA 357667 28 100.0 33 ............................ CGATATTATACCGGTGTTTTTACCGGTTCTCCT 357728 28 100.0 34 ............................ TGAGTTTGGTATCACGCTCTTTTGTGGTCGTCAG 357790 28 100.0 33 ............................ TAAATGTACTTCTTCCACCACGTGGCACTATAA 357851 28 100.0 33 ............................ TGCCGAAGTTGAAGACATGGGTCAGGCTTTTGC 357912 28 100.0 33 ............................ CGACCAAAGCCAAACCAACACAGGCGAATACAA 357973 28 100.0 33 ............................ TAAGGTTGTCAACACGGCTTATGCCAACAAGGA 358034 28 100.0 33 ............................ CGACATCATCAAGGATTGCCAGTTCAACTTGGG 358095 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 21 28 100.0 33 GTTTTCCCCGCACATGCGGGGGTGATCC # Left flank : GAACGAGATGCAATTATTGCCATTGGGGCGGTAAAAGGACCGTCAGTTAACGAAACCGAAAAATTCACTACCTTGGTGAATCCACGAAGGCCGCTTCCATCAACGGTTGCCAAGTTGACGGGATTGTCGGCGGAGGAGTTGGTTGCCAATGGGATCAGTCTGAGCGAGGCAGTGCAGGCCTTACGGGATTTTACCGGCTCGCTCCCTTTAGTCGGATATAATCTGCGTTTCGACATGGGATTTCTTTCGGCAGCGGGTCGTGAAACTGGGTTAACGTCTTTTGGGAATCAGACTTTTGATTTACTACCGCTTGTTAAGAAATCCAGTCGCTTTCTGGATAATTACAAGCTTAGTACAGTGCTGGCACATTATCAGATCGATAACGAGCAACCGCATCACGCGTTGTCTGATGCGACGGCAACAATGGCACTGGCGGACAAACTCATAAAAAAAGGGATCTTAACGATTGGCAAACGTTGATGGGATAGGGATTTTTTAGT # Right flank : CTACCAGCACGGGGTTACCATGTCAACCCTTTTTGTTTTCCCGTATGTGTCAAGTCTTTCTCGGTTCCACTAATTGAACTATTCTTTTTTGCTCGACTGCCGGTCATCCTGGTCTACTGAGTGGGTTCAGTTGAAGATGTGTGCTAGGTGACCAGTGCCCGAACTAGTACTTGCGTACAGCGCTATACGTCCCTGATAAGCACCCTGGTGCGTTGTGGGCGCTGGCCCAAACAGCTGAAGGCTCCGAAGCGTGGTCTTCACTTCTGGCTTGATTTGCGTTTCCAGAAACGCCGTAGCTTCCAGACTGCTGAGGCAATCATCGTTCTGCAGCGCGTCAATGATCCTCAACTCTGCGATCAGACCACTTCTTGTCCATGAACGGCCCTGCAGCTTGGTCCGATACGTATACCGTCTATGGTTAGACTCACAGCTTCCAAGTCCACGCCGATCCAATTGTCGATTCGAAAGTGCCTCGATGTAAGGCCAATTTCGGTCAAGAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCACATGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGTTCCCCGCACGTGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //