Array 1 998980-1000411 **** Predicted by CRISPRDetect 2.4 *** >NC_013850.1 Klebsiella variicola At-22, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 998980 29 100.0 32 ............................. CGACCACGATTGCGGCCATGATTAACTTTTTC 999041 29 100.0 32 ............................. CCTACTGGAAAACTCAATGCCGAGGGATAACG 999102 29 100.0 32 ............................. TTCGTTACGTTCACGTTAAACGTGATGGATTC 999163 29 100.0 32 ............................. TATATGAATTAGCGTATAGTTCTAGGAACTTC 999224 29 100.0 32 ............................. TCAGTCCAATTGGTGGGCAGGAGGGTTATTCA 999285 29 100.0 32 ............................. GGGATGTGGTTTACTGCGATCCGCCTTACGAA 999346 29 100.0 32 ............................. TCTGGCGTGGTCAGCGAGGTTGAATGCATCAC 999407 29 100.0 32 ............................. ATGTCGATCTGGATAAGGGCGTGATACACGTT 999468 29 100.0 32 ............................. CTCGTCCCTTTCTTGAATCCGCCGGATGCTGG 999529 29 100.0 32 ............................. CATACCCACACTGGACACCTTCGGCTCCCGGC 999590 29 100.0 32 ............................. AGCCATATTTCCCAAATATCGGGCTGCACCAA 999651 29 100.0 32 ............................. GTCACTGTACAACGGGATCAGCATGATCTCAC 999712 29 100.0 32 ............................. AGATACCCGAGCGGCGCCGGGAACTGGTGGCA 999773 29 96.6 32 G............................ AAAGTAGAGCGTTAAATAACACACTGTAATCA 999834 29 96.6 32 G............................ CGCCCTGACTAAAGCGCAGTCGGCTGTTAGCG 999895 29 96.6 32 G............................ TCGTTATTCGTCATTTTGGTTCCATGGCCAAT 999956 29 96.6 32 G............................ CGTTAATCGAGGTGGTAAACCGCTGCGCCGCC 1000017 29 96.6 32 G............................ TGGTGGGAATGCTCCAGCAAGAGGCTTTATCC 1000078 29 96.6 32 G............................ TATTTGACGTAATCGGAAACGCTAATTTTGAA 1000139 29 96.6 32 G............................ TTCGCGCTGGTTTTCTCATCTGCGGCACACAA 1000200 29 96.6 32 G............................ AGCCAGTCCGCATCTCGCCAAAAACCGTTAAC 1000261 29 96.6 32 G............................ ACTACGAGCTAACCGGTGAGGATGAGTTCTGG 1000322 29 93.1 32 G...........................A TCGACGATGTTCTGCGTGATGGTGATGTATGC 1000383 28 79.3 0 G..........TT..-.........G..C | A [1000394] ========== ====== ====== ====== ============================= ================================ ================== 24 29 97.6 32 ATGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGTTCTTGCGGCAGGCGAAATTCAGCCACCCCCACCACCTGAAGATGCACATCCTGTAGCTATCCCACTCCCTGTCTCTTTAGGTGATGCAGGCCATCGGAGTCGTTAACGATGAGTATGTTGGTTGTGGTGACAGAGAATGTTCCTCCGCGACTCCGTGGACGGTTAGCCGTCTGGTTGCTGGAGATTCGCGCTGGTGTGTATGTTGGGGACATCTCAACAAAGACACGAGAAATGATATGGCAACAGGTTTCCGTTCTGGCAGAAGAGGGGAATGTTGTTATGGCTTGGGCGACGAATACCGAATCCGGATTTGAGTTTCAGACATATGGTGTGAATAGACGTATTCCGGTGGATTTGGATGGACTGCGGTTAGTATCTTTCCTTCCTGTTTTAAAACAATGAGTTATATGCTCTTTAATAATGTAAAATTGTTTCTTAATTGTTGGTGAATTGTTTTTCAGTTAAAAGCTATTGATATTGAAGTCTATTTTTTTAGT # Right flank : CGCAACTAACAATCAGGCGCCATCTCATAGGCTGTTTGATGGCGCAGGATCAGCACCGCTTGCCACCAGCCCTGCGCCTGAGCTTTTTTGTGTCCTTTTGTCGGCAAGGTATTGATAAACGCCTGGGCGGTGTCTCTATCCTCAGTTAGCGCAAAATAGGCCAGAGCTTTTGCTACTGACCCGTGCGCATCAGGCGTCGTGCGAGCAGATTGCGTAGCCTGGCGTCGGCGCTTTCGCGCCCGGCATTTTTCGGCATATTAAGATCAGAAGGAGAAGGTGCCGGGACATATTTATCCACGAAAGCAATGAGCTCATTGACCGTTAGCACCCGTTCGGCAATGTGCGCGACATCCGGCCAGTAATTTTCTTTCGCCTGATACATCAACCACATCGCCTGCAGATAGTCGTCGCGGTTGAGCGCGAGTATCGCCTGCTCGGCGTGAATACGGCAGACCGGCGTCACAAATTCCTCGCTGATAATGTCATCACTAGACTGCTGG # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.88, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.50,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //