Array 1 58-375 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCEL010000017.1 Flavobacterium psychrophilum strain 98754 contig00017, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================================== =========================== ================== 58 42 100.0 27 .......................................... ACTATTGGAGATCAGGCTTTTGCAGAG 127 42 100.0 27 .......................................... ACTATCGGAAAAGGGTCTTTTGCAGAG 196 42 95.2 27 .............T....A....................... GTTATTAGAAGGGGTATTTTTGCAGGC 265 42 97.6 27 .............T............................ GATATTGAAAATGGTGCTTTTTTCAGT 334 42 100.0 0 .......................................... | ========== ====== ====== ====== ========================================== =========================== ================== 5 42 98.6 27 TGTTCTGGTTTAACATCAGTTACAATTCCTAATTCTGTGACT # Left flank : ACATCAGTTACAATTCCTAATTCTGTGACTGATATTGAAAATGGTGCTTTTTTCAGTT # Right flank : TGCTATTGGAGAGGATGCTTTTGCAGGCTGTAGAAGTTTAAAGACAGTAAATTGCCATATTACAAGCCCTTTAGTTATTAATGCAAATGTCTTCGGCAATATTACTCAATCAAACTGTGCTTTAAATGTTCCTACTGGTACGCAAGTCGCTTATCAGGCAGCCGCGGTTTGGAGAAATTTCAGCCCTATTTCTGGTGGTTTACTTTCTAATCATTCATTTGCAATAGAAAGTGCTTTAAAAATATACCCAAACCCAGTTTCAGAAATTTTAAACATAGCCTTGCAAGAGGGCTTACAATTACAAAAAGTGAATTTTTACAACACATTAGGGCAGTTAATAAAAACAACTAATCATTCAGAAATAAATGTTTCAAGCTTTGCAAAAGGCAATTACTTTGTAGAAGTAATGACAAACCAAGGTAAGGCAACAAAAACAATTATTGTTCAGTAATTTTAAAAAAATATTTTATACAATAAAAGGTTAGCTTCAAACGGCTAAC # Questionable array : NO Score: 2.85 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.13, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGTTCTGGTTTAACATCAGTTACAATTCCTAATTCTGTGACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.80,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 8957-7471 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCEL010000032.1 Flavobacterium psychrophilum strain 98754 contig00032, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 8956 46 71.7 29 A.AA.T....A.ACC...CGGGT....................... TTTTGTTTTCGTCAAATTCCCCATTTGTG T [8952] 8880 46 100.0 30 .............................................. ATTAATGCGCTAATTATCGAAGGTAGCACT 8804 46 100.0 30 .............................................. AGGACGATTATAAATTTATGCTAAATATTA 8728 46 100.0 30 .............................................. AGATATATCTAATACTAGAGCGTACGACAG 8652 46 100.0 30 .............................................. AAAAACAATATCGAAAAACTGAAAGAGAAT 8576 46 100.0 30 .............................................. ATTTAATGTAATTGTACCCGAACCAGCTCC 8500 46 100.0 30 .............................................. TATATCCGTGTTTGAATACACATTGCCACC 8424 46 100.0 29 .............................................. CGTTTTCGCACGTGAAATCAAAGTACTAT 8349 46 100.0 30 .............................................. TTTTAAAAAATGGTTAAGTAGGAAAACTTA 8273 46 100.0 30 .............................................. TCCAGTAAGCGAGATGTCGTATATCAAAGT 8197 46 100.0 30 .............................................. AGCCAATGCCTTGTGTCCTGTTATGTGTTC 8121 46 100.0 30 .............................................. AAAAGATTTAGCAACATAGATGATTGTTTT 8045 46 100.0 29 .............................................. TTTTACTTTTTATTTAAAGCAACTGTAAT 7970 46 100.0 30 .............................................. TAATAAGTTGCTCGTTTCCGTTTATTCCGT 7894 46 100.0 30 .............................................. AGTAGGTAATGTATTCACAATAGACACATT 7818 46 100.0 29 .............................................. AAAACGAAATACATACAGCGCACGCATTC 7743 46 97.8 30 ............................C................. AGGCACTTCTTTAGACTTAAATAAGTCTTT 7667 46 100.0 29 .............................................. AGTAATAGATGGGGGGTTTGAATGCCGTA 7592 46 100.0 30 .............................................. TCATCATCTGATGAAAATTGCTGTTCAATA 7516 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 20 46 98.5 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : CAAAATTGGGGTATTGTTTTAAATCAATTTAATCTTATATTTGACAAAAGGCTCAGATTATAAAATCCAAGCCTAACTTTTTAACTTACACACTTTGCGGGATAGTGTCATCA # Right flank : ATACCGCGAGTTAATCGTTTGATATGTTGGTGGTTATATGCTTATTTTGAAATTAAAAAACAGTTCTGTTTGTGTGTTGATATTCTGGTAGGTCTAATATTTCTAAATCCTATTTTTCAAAAAAGTTCTAATTGTTGCGAAGGTTTGTCTGTTTCTACAGGTTTTTTTCCATAAAAAAGCTCCATCATACCAAATTGTTTATCGGTTATTTGCATTACTCCAATTTTGCCGTGTTCGGGCAAACTATTTCTTATTCTTTTGGTATGTACTTCGGCATTTTCTCTGCTGGCACAAAATCGTATATAGATCGAAAACTGAAACATAGAAAAACCATCGTCCAATAATTTCTTGCGAAATTCACTGGCAATTTTACGCTCTTTCCGCGTTTCGGTAGGTAAGTCAAAAAAAACTAATATCCACAAACTTCTATACTGGTTTAAACGGGTGTAATGTTCGTCATACATAAATAGGGTATAAAATTTTTCTTGCGGCTCCCGCAA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.90,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //